BLASTX nr result
ID: Cnidium21_contig00012708
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00012708
(1671 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera] 811 0.0
ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223... 798 0.0
ref|XP_004145322.1| PREDICTED: helicase SKI2W-like [Cucumis sati... 792 0.0
ref|XP_003552970.1| PREDICTED: helicase SKI2W-like [Glycine max] 781 0.0
ref|NP_190280.5| antiviral helicase SKI2 [Arabidopsis thaliana] ... 758 0.0
>ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]
Length = 1379
Score = 811 bits (2096), Expect = 0.0
Identities = 417/566 (73%), Positives = 469/566 (82%), Gaps = 10/566 (1%)
Frame = +2
Query: 2 GDVSLRPEASCLIMTTEILRSMLYKGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIML 181
GDVSLRPEASCLIMTTEILRSMLYKGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIML
Sbjct: 454 GDVSLRPEASCLIMTTEILRSMLYKGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIML 513
Query: 182 PRHINIVLLSATVPNTIEFADWIGRTKQKQIRVTGTTRRPVPLEHCIFYYGEFFKVCENE 361
PRHINIVLLSATVPNTIEFADWIGRTKQKQIRVTGTT+RPVPLEHCIFY GE +K+CE+E
Sbjct: 514 PRHINIVLLSATVPNTIEFADWIGRTKQKQIRVTGTTKRPVPLEHCIFYSGELYKICESE 573
Query: 362 KFLSPGXXXXXXXXXXXSMSTVGG-SGKYTSGPSVSRDVARTQKQESSIRSKQNKHSGPQ 538
FL G ++ST GG SG Y+ PS + D AR Q++E+ R KQNK+SG Q
Sbjct: 574 TFLPQGLKTAKDVHKKKNLSTGGGGSGTYSGPPSAAHDGARAQRRENPGRGKQNKYSGSQ 633
Query: 539 NLXXXXXXXXXXXXXXXXX-----RRSEASXXXXXXXXXXXXXXXPVVIFCFSKNRCDKS 703
+ RRSEAS PVVIFCFSKNRCD S
Sbjct: 634 KVGNFYGTGGGNQNSSGSQSNWGSRRSEASLWLLLINKLSKKSLLPVVIFCFSKNRCDIS 693
Query: 704 ADHMNGVDLTSTSEKSDIRIFCDKAFSRLKGSDRNLPQVVRLQNLLRRGIGVHHAGLLPI 883
AD M G+DLTS+SEK +I +FC++AFSRLKGSDRNLPQV+R+Q+LLRRGIGVHHAGLLPI
Sbjct: 694 ADKMTGIDLTSSSEKHEIHVFCERAFSRLKGSDRNLPQVIRVQSLLRRGIGVHHAGLLPI 753
Query: 884 VKEVVEMLFCRGVIKILFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLPGEYTQMAG 1063
VKEVVEMLFCRGV+K+LFSTETFAMGVNAPARTVVFD+LRKFDG+EFRQLLPGEYTQMAG
Sbjct: 754 VKEVVEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDSLRKFDGREFRQLLPGEYTQMAG 813
Query: 1064 RAGRRGLDKIGTVVVMCRDEIPEEKDLKNVIIGSATRLESQFRLTYIMIMHLLRVEELKV 1243
RAGRRGLDKIGTVVVMCRDEIP+E+DLK+VI+GSATRL SQFRLTYIMI+HLLRVEELKV
Sbjct: 814 RAGRRGLDKIGTVVVMCRDEIPDERDLKHVIVGSATRLASQFRLTYIMILHLLRVEELKV 873
Query: 1244 EDMLKRSFAEFHAQKKLPEQQQLLMRKLAQPTKAIECIKGEPAIEEYYELYSEAQKYNTE 1423
EDMLKRSFAEFHAQKKLPE+QQLLMRKLAQPTK IECIKGEP IEEYY++Y+EA++++ +
Sbjct: 874 EDMLKRSFAEFHAQKKLPEKQQLLMRKLAQPTKTIECIKGEPTIEEYYDMYTEAEQHSNQ 933
Query: 1424 ISEAVMKSPSSQQYLVPGRVVVVKSQSVQDHLLGVIVKAPSSNSKQYIVLVITPDLPLTL 1603
I E VM+S ++QQ+L GRVVVVKSQSVQDHL+GV+VKAPS++SKQYIVLV+ P LP TL
Sbjct: 934 ILETVMQSSAAQQFLTLGRVVVVKSQSVQDHLIGVVVKAPSASSKQYIVLVLKPHLPSTL 993
Query: 1604 QAPLNSSD-QHKNSGDF---QILVPK 1669
Q P S + Q K SG F ++PK
Sbjct: 994 QTPSESGNLQDKKSGAFPEGHFILPK 1019
>ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223540281|gb|EEF41852.1|
helicase, putative [Ricinus communis]
Length = 1335
Score = 798 bits (2060), Expect = 0.0
Identities = 412/564 (73%), Positives = 462/564 (81%), Gaps = 8/564 (1%)
Frame = +2
Query: 2 GDVSLRPEASCLIMTTEILRSMLYKGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIML 181
GDVSLRPEA+CLIMTTEILRSMLY+GADIIRDIEWVIFDEVHYVND ERGVVWEEVIIML
Sbjct: 422 GDVSLRPEANCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDAERGVVWEEVIIML 481
Query: 182 PRHINIVLLSATVPNTIEFADWIGRTKQKQIRVTGTTRRPVPLEHCIFYYGEFFKVCENE 361
PRH+NIVLLSATVPNT+EFADWIGRTKQK+I+VTGTT+RPVPLEHC+FY GE +K+CENE
Sbjct: 482 PRHVNIVLLSATVPNTVEFADWIGRTKQKKIQVTGTTKRPVPLEHCLFYSGELYKICENE 541
Query: 362 KFLSPGXXXXXXXXXXXSMSTVGGSGKYTSGPSVSRDVARTQKQESSIRSKQNKHSGPQN 541
F+ G + S V +SG RD A +K+E R+KQNKH G QN
Sbjct: 542 TFIPQGLRVAKDAHKKKNTSAV------SSGSLALRDGAHGKKREYLNRNKQNKHFGSQN 595
Query: 542 LXXXXXXXXXXXXXXXXX-----RRSEASXXXXXXXXXXXXXXXPVVIFCFSKNRCDKSA 706
RRSEAS PVVIFCFSKNRCDKSA
Sbjct: 596 AGSFSGTSWGNQNNGNGQNNWGSRRSEASLWLQLVNKLSKKSLLPVVIFCFSKNRCDKSA 655
Query: 707 DHMNGVDLTSTSEKSDIRIFCDKAFSRLKGSDRNLPQVVRLQNLLRRGIGVHHAGLLPIV 886
D M+G DLTS+SEKS+IR+FCDKAFSRLKGSDRNLPQ+VR+Q+LLRRGIGVHHAGLLPIV
Sbjct: 656 DGMSGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIGVHHAGLLPIV 715
Query: 887 KEVVEMLFCRGVIKILFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLPGEYTQMAGR 1066
KEVVEMLFCRGVIK+LFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLPGEYTQMAGR
Sbjct: 716 KEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLPGEYTQMAGR 775
Query: 1067 AGRRGLDKIGTVVVMCRDEIPEEKDLKNVIIGSATRLESQFRLTYIMIMHLLRVEELKVE 1246
AGRRGLDKIGTV+VMCRDEIP+E+DLK+VI+GSATRLESQFRLTYIMI+HLLRVEELKVE
Sbjct: 776 AGRRGLDKIGTVIVMCRDEIPDERDLKHVIVGSATRLESQFRLTYIMILHLLRVEELKVE 835
Query: 1247 DMLKRSFAEFHAQKKLPEQQQLLMRKLAQPTKAIECIKGEPAIEEYYELYSEAQKYNTEI 1426
DMLKRSFAEFH QKKLPE QQ+LMRKLAQPTKAIECIKGEP IEEYY+++ EA++Y+ +I
Sbjct: 836 DMLKRSFAEFHTQKKLPETQQVLMRKLAQPTKAIECIKGEPDIEEYYDMFLEAEEYSNQI 895
Query: 1427 SEAVMKSPSSQQYLVPGRVVVVKSQSVQDHLLGVIVKAPSSNSKQYIVLVITPDLPLTLQ 1606
SEAVM+S ++QQ+L PGRVVVVKSQS QDHLLGV+VK PS++ KQYIVLV+ PDLP + Q
Sbjct: 896 SEAVMQSSAAQQFLTPGRVVVVKSQSGQDHLLGVVVKGPSTSMKQYIVLVLKPDLPSSTQ 955
Query: 1607 APLNSSDQHKNSGDF---QILVPK 1669
S+ Q K SGD +L+PK
Sbjct: 956 I---SNLQDKKSGDIPKAYLLMPK 976
>ref|XP_004145322.1| PREDICTED: helicase SKI2W-like [Cucumis sativus]
Length = 1352
Score = 792 bits (2045), Expect = 0.0
Identities = 412/564 (73%), Positives = 462/564 (81%), Gaps = 8/564 (1%)
Frame = +2
Query: 2 GDVSLRPEASCLIMTTEILRSMLYKGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIML 181
GDVSLRPEASCLIMTTEILRSMLY+GADIIRDIEWVIFDEVHYVND+ERGVVWEEVIIML
Sbjct: 435 GDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIML 494
Query: 182 PRHINIVLLSATVPNTIEFADWIGRTKQKQIRVTGTTRRPVPLEHCIFYYGEFFKVCENE 361
PRHINIVLLSATVPNTIEFADWIGRTKQK+I VTGT +RPVPLEHCIFY GE +K+CE+E
Sbjct: 495 PRHINIVLLSATVPNTIEFADWIGRTKQKRIHVTGTAKRPVPLEHCIFYSGELYKICESE 554
Query: 362 KFLSPGXXXXXXXXXXXSMSTVGGSGKYTSGPSVSRDVARTQKQESSIRSKQNKHSGPQN 541
FLS G + S VGG+G +G SV+ D + +K ES RSKQNKHSG QN
Sbjct: 555 IFLSHGLKAAKDASKKKNSSVVGGAGGSHAGASVANDGTKNRKVESFNRSKQNKHSGSQN 614
Query: 542 LXXXXXXXXXXXXXXXXX-----RRSEASXXXXXXXXXXXXXXXPVVIFCFSKNRCDKSA 706
L RRS+AS PVVIFCFSKNRCDKSA
Sbjct: 615 LGNFSGTSWGNQKNGDGHNNWGSRRSDASLWLLLINRLSKKSLLPVVIFCFSKNRCDKSA 674
Query: 707 DHMNGVDLTSTSEKSDIRIFCDKAFSRLKGSDRNLPQVVRLQNLLRRGIGVHHAGLLPIV 886
D++ +DLTS+SEKS+IR+FCDKAFSRLKGSDR+LPQ+VR+Q LLRRGIGVHHAGLLPIV
Sbjct: 675 DNIYSIDLTSSSEKSEIRVFCDKAFSRLKGSDRSLPQIVRVQGLLRRGIGVHHAGLLPIV 734
Query: 887 KEVVEMLFCRGVIKILFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLPGEYTQMAGR 1066
KEVVEMLFCRGVIK+LFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLPGEYTQMAGR
Sbjct: 735 KEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLPGEYTQMAGR 794
Query: 1067 AGRRGLDKIGTVVVMCRDEIPEEKDLKNVIIGSATRLESQFRLTYIMIMHLLRVEELKVE 1246
AGRRGLDKIGTV+VMCR+EIPEEKDLK VI+G+AT+LESQFRLTYIMI+HLLRVEELKVE
Sbjct: 795 AGRRGLDKIGTVIVMCREEIPEEKDLKRVIVGTATKLESQFRLTYIMILHLLRVEELKVE 854
Query: 1247 DMLKRSFAEFHAQKKLPEQQQLLMRKLAQPTKAIECIKGEPAIEEYYELYSEAQKYNTEI 1426
DMLKRSFAEFHAQKKLPE+QQLLMRKLAQPT+ IECIKGE IEEYY+LY+EA+K + ++
Sbjct: 855 DMLKRSFAEFHAQKKLPEKQQLLMRKLAQPTRTIECIKGEATIEEYYDLYAEAEKPSNQL 914
Query: 1427 SEAVMKSPSSQQYLVPGRVVVVKSQSVQDHLLGVIVKAPSSNSKQYIVLVITPDLPLTLQ 1606
SEAVM+S + QQ+LVPGRVV+VKSQS +DHLLGVIVKA + ++QYIVLV+ PD T
Sbjct: 915 SEAVMQSSAIQQFLVPGRVVIVKSQSAKDHLLGVIVKA--NMNRQYIVLVLMPDSLPTQS 972
Query: 1607 APLNSSDQHKNSGDF---QILVPK 1669
+ +SSD K D +VPK
Sbjct: 973 S--SSSDLEKKKQDLTQGYFMVPK 994
>ref|XP_003552970.1| PREDICTED: helicase SKI2W-like [Glycine max]
Length = 1342
Score = 781 bits (2016), Expect = 0.0
Identities = 400/563 (71%), Positives = 447/563 (79%), Gaps = 13/563 (2%)
Frame = +2
Query: 2 GDVSLRPEASCLIMTTEILRSMLYKGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIML 181
GDVSLRPEASCLIMTTEILRSMLY+GADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIML
Sbjct: 426 GDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIML 485
Query: 182 PRHINIVLLSATVPNTIEFADWIGRTKQKQIRVTGTTRRPVPLEHCIFYYGEFFKVCENE 361
PRHINIVLLSATVPNTIEFADWIGRTKQK+IRVTGTT+RPVPLEHC+FY GE +K+CE+E
Sbjct: 486 PRHINIVLLSATVPNTIEFADWIGRTKQKEIRVTGTTKRPVPLEHCLFYSGELYKICESE 545
Query: 362 KFLSPGXXXXXXXXXXXSMSTVGGSGKYTSGPSVSRDVARTQKQESSIRSK--------- 514
KFL G T GG G S D AR QK+E++ +K
Sbjct: 546 KFLPQGLKAAKKEASRKKNLTAGGGSGPKPGISPGHDKARVQKRENTSHTKHHGANFYGT 605
Query: 515 ----QNKHSGPQNLXXXXXXXXXXXXXXXXXRRSEASXXXXXXXXXXXXXXXPVVIFCFS 682
QN +G N RR++AS PVVIFCFS
Sbjct: 606 GRGYQNNGNGQSN---------------WELRRADASMLLMLINKLSKKSLLPVVIFCFS 650
Query: 683 KNRCDKSADHMNGVDLTSTSEKSDIRIFCDKAFSRLKGSDRNLPQVVRLQNLLRRGIGVH 862
KNRCDKSAD + G DLTS+SEKS+IR+FCDKAFSRLKGSD+NLPQVVR+QNLLRRGIGVH
Sbjct: 651 KNRCDKSADSLTGTDLTSSSEKSEIRLFCDKAFSRLKGSDKNLPQVVRVQNLLRRGIGVH 710
Query: 863 HAGLLPIVKEVVEMLFCRGVIKILFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLPG 1042
HAGLLPIVKEVVEMLFCRGVIK+LFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLL G
Sbjct: 711 HAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLAG 770
Query: 1043 EYTQMAGRAGRRGLDKIGTVVVMCRDEIPEEKDLKNVIIGSATRLESQFRLTYIMIMHLL 1222
EYTQMAGRAGRRGLDKIGTV++MCRDE+PEE DL+ VI+GSATRLESQFRLTYIMI+HLL
Sbjct: 771 EYTQMAGRAGRRGLDKIGTVILMCRDELPEESDLEPVIVGSATRLESQFRLTYIMILHLL 830
Query: 1223 RVEELKVEDMLKRSFAEFHAQKKLPEQQQLLMRKLAQPTKAIECIKGEPAIEEYYELYSE 1402
RVEELKVEDMLKRSFAEFHAQKKLPE QQLL RKL QPTKAIEC+KGEP IEEYY+LY E
Sbjct: 831 RVEELKVEDMLKRSFAEFHAQKKLPEMQQLLKRKLNQPTKAIECLKGEPTIEEYYDLYLE 890
Query: 1403 AQKYNTEISEAVMKSPSSQQYLVPGRVVVVKSQSVQDHLLGVIVKAPSSNSKQYIVLVIT 1582
A+ Y+ +ISEA+++SPS+QQ+L GRVV+VKS+S QDHLLGV+V+ PS +K YIV VI
Sbjct: 891 AETYSNQISEAILQSPSAQQFLNTGRVVIVKSESAQDHLLGVVVETPSPTNKMYIVFVIK 950
Query: 1583 PDLPLTLQAPLNSSDQHKNSGDF 1651
PD+P ++ +S + SG F
Sbjct: 951 PDMPSSVDNASSSGNMQNKSGAF 973
>ref|NP_190280.5| antiviral helicase SKI2 [Arabidopsis thaliana]
gi|332644703|gb|AEE78224.1| antiviral helicase SKI2
[Arabidopsis thaliana]
Length = 1347
Score = 758 bits (1956), Expect = 0.0
Identities = 382/531 (71%), Positives = 435/531 (81%)
Frame = +2
Query: 2 GDVSLRPEASCLIMTTEILRSMLYKGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIML 181
GDVS+RPEASCLIMTTEILRSMLY+GADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIML
Sbjct: 434 GDVSIRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIML 493
Query: 182 PRHINIVLLSATVPNTIEFADWIGRTKQKQIRVTGTTRRPVPLEHCIFYYGEFFKVCENE 361
PRHIN VLLSATVPNT EFADWIGRTKQK+IRVTGTT+RPVPLEHC+FY GE +KVCENE
Sbjct: 494 PRHINFVLLSATVPNTFEFADWIGRTKQKEIRVTGTTKRPVPLEHCLFYSGELYKVCENE 553
Query: 362 KFLSPGXXXXXXXXXXXSMSTVGGSGKYTSGPSVSRDVARTQKQESSIRSKQNKHSGPQN 541
FLS G + + V + K G S +D +++QK E+ R KQNKHS ++
Sbjct: 554 VFLSKGIKDAKDSQKKKNSNAVSVAPKQQMGSSAHQDGSKSQKHEAHSRGKQNKHSSVKD 613
Query: 542 LXXXXXXXXXXXXXXXXXRRSEASXXXXXXXXXXXXXXXPVVIFCFSKNRCDKSADHMNG 721
+ RRS AS PVV+FCFSKN CD+ AD + G
Sbjct: 614 VGKSSYSGNSQNNGAF--RRSAASNWLLLINKLSKMSLLPVVVFCFSKNYCDRCADALTG 671
Query: 722 VDLTSTSEKSDIRIFCDKAFSRLKGSDRNLPQVVRLQNLLRRGIGVHHAGLLPIVKEVVE 901
DLTS+SEKS+IR+FCDKAFSRLKGSDRNLPQV+RLQ+LL RGIGVHHAGLLPIVKEVVE
Sbjct: 672 TDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQVLRLQSLLHRGIGVHHAGLLPIVKEVVE 731
Query: 902 MLFCRGVIKILFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLPGEYTQMAGRAGRRG 1081
MLFCRGVIK+LFSTETFAMGVNAPARTVVFD LRKFDGKEFRQLLPGEYTQMAGRAGRRG
Sbjct: 732 MLFCRGVIKVLFSTETFAMGVNAPARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRG 791
Query: 1082 LDKIGTVVVMCRDEIPEEKDLKNVIIGSATRLESQFRLTYIMIMHLLRVEELKVEDMLKR 1261
LDK GTVVVMCRDE+P+E DL+ VI+GSATRLESQFRLTYIMI+HLLRVEELKVEDMLKR
Sbjct: 792 LDKTGTVVVMCRDEVPDESDLRRVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKR 851
Query: 1262 SFAEFHAQKKLPEQQQLLMRKLAQPTKAIECIKGEPAIEEYYELYSEAQKYNTEISEAVM 1441
SFAEFHAQKKLPE+QQLLM K + PTK IECIKGEPAIE+YY++Y EA +YN ++SEAVM
Sbjct: 852 SFAEFHAQKKLPEKQQLLMIKRSLPTKHIECIKGEPAIEDYYDMYMEANEYNNKMSEAVM 911
Query: 1442 KSPSSQQYLVPGRVVVVKSQSVQDHLLGVIVKAPSSNSKQYIVLVITPDLP 1594
+SP +Q +LV GRVVV+KS D+LLG+++K PS+ ++QY+VLVI ++P
Sbjct: 912 QSPYAQSFLVQGRVVVMKSGMGIDNLLGIVLKGPSNTNRQYVVLVIKSEIP 962