BLASTX nr result

ID: Cnidium21_contig00012687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012687
         (930 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A...   185   2e-44
ref|XP_002314830.1| predicted protein [Populus trichocarpa] gi|2...   161   2e-37
ref|XP_002312419.1| predicted protein [Populus trichocarpa] gi|2...   154   2e-35
ref|XP_002526304.1| conserved hypothetical protein [Ricinus comm...   153   5e-35
ref|XP_002892849.1| ring-H2 finger A2A [Arabidopsis lyrata subsp...   144   4e-32

>ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Vitis vinifera]
          Length = 162

 Score =  185 bits (469), Expect = 2e-44
 Identities = 101/171 (59%), Positives = 119/171 (69%), Gaps = 10/171 (5%)
 Frame = -1

Query: 768 MGLQNQMNDVSSESFPILILLLIAKGVGYLRSILLAILHSLNLSHDDSPE-------AVT 610
           MGLQ+Q+NDVSS+S P+L++ +IA  V Y+RS+LL +  S+ LS  D+ E       AV 
Sbjct: 1   MGLQSQLNDVSSDSIPLLLVAIIANCVAYIRSLLLGLFQSMGLSRFDADEVEDGLLGAVG 60

Query: 609 SGLA---VLAEQLNFNRMFSYKYNRYTTLDGAGGSDCVVCLSRLKNGEYVRRLACKHVFH 439
           SGLA   VLAEQLN NR+FSY+Y      DG   SDCVVCL RL++G+ VRRLAC+HVFH
Sbjct: 61  SGLASLIVLAEQLNLNRVFSYRYGE----DGGAASDCVVCLCRLRDGDQVRRLACRHVFH 116

Query: 438 KECFDGWLDHLNFNCPLCRSSLVGSGERVGLEVARDGGS*HPLTFLVRWLS 286
           KECFDGWLDHLNFNCPLCRS LV S ERV L   R GG       LV W S
Sbjct: 117 KECFDGWLDHLNFNCPLCRSPLV-SDERVALTQRRVGGD------LVTWFS 160


>ref|XP_002314830.1| predicted protein [Populus trichocarpa] gi|222863870|gb|EEF01001.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  161 bits (407), Expect = 2e-37
 Identities = 92/174 (52%), Positives = 108/174 (62%), Gaps = 13/174 (7%)
 Frame = -1

Query: 768 MGLQNQMNDVSSESFPILILLLIAKGVGYLRSILLAILHSLNLSHDDSPEAVT------- 610
           MGLQNQ+NDVSSES P+L++ LIA  V  LRS L ++ HS+ L   D    +        
Sbjct: 1   MGLQNQLNDVSSESIPLLLIALIANCVACLRSFLFSVFHSVGLHRLDQAHVMDDGLLGSI 60

Query: 609 ----SGLAVLAEQLNFNRMFSYKY--NRYTTLDGAGGSDCVVCLSRLKNGEYVRRLACKH 448
               +GL VLAEQ   NR+FSYKY     +  +  GGSDCVVCL  L++G+ VRRL C H
Sbjct: 61  GSGFAGLIVLAEQRKLNRVFSYKYCCGGDSNTNDKGGSDCVVCLCTLRHGDQVRRLDCCH 120

Query: 447 VFHKECFDGWLDHLNFNCPLCRSSLVGSGERVGLEVARDGGS*HPLTFLVRWLS 286
           VFHKECFDGWLDHLNFNCPLCR  LV S ERV     R G        +V WLS
Sbjct: 121 VFHKECFDGWLDHLNFNCPLCRWPLV-SDERVEETRRRVGAD------VVDWLS 167


>ref|XP_002312419.1| predicted protein [Populus trichocarpa] gi|222852239|gb|EEE89786.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  154 bits (390), Expect = 2e-35
 Identities = 89/174 (51%), Positives = 107/174 (61%), Gaps = 13/174 (7%)
 Frame = -1

Query: 768 MGLQNQMNDVSSESFPILILLLIAKGVGYLRSILLAILHSLNLSHDDSPEAVT------- 610
           MGLQNQ+NDVSSES P+L++  IA  V  LRS   ++ HS+ +   D    +        
Sbjct: 1   MGLQNQLNDVSSESIPLLLIAFIANCVACLRSFFFSVFHSVGVHRLDQAHVMDDRLMGSM 60

Query: 609 ----SGLAVLAEQLNFNRMFSYKY--NRYTTLDGAGGSDCVVCLSRLKNGEYVRRLACKH 448
               +GL VLAEQ   NR+F+YKY   R    D  GGSDCVVCL  L++G+ VR+L C+H
Sbjct: 61  GSGLAGLIVLAEQRKLNRVFAYKYCCGRDDGND-KGGSDCVVCLCTLRDGDQVRKLDCRH 119

Query: 447 VFHKECFDGWLDHLNFNCPLCRSSLVGSGERVGLEVARDGGS*HPLTFLVRWLS 286
           VFHKECFDGWLDHLNFNCPLCR  LV S ERV     R G +      LV W S
Sbjct: 120 VFHKECFDGWLDHLNFNCPLCRWPLV-SDERVEETRRRVGEN------LVEWFS 166


>ref|XP_002526304.1| conserved hypothetical protein [Ricinus communis]
           gi|223534385|gb|EEF36093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score =  153 bits (387), Expect = 5e-35
 Identities = 88/188 (46%), Positives = 110/188 (58%), Gaps = 27/188 (14%)
 Frame = -1

Query: 768 MGLQNQMNDVSSESFPILILLLIAKGVGYLRSILLAILHSLNLSHDDSPEAVT------- 610
           MGLQ+Q+NDVSS+S P+L+L LIAK + +LRS   +I HS+ L    + +++        
Sbjct: 1   MGLQSQLNDVSSDSIPLLLLALIAKSIDHLRSFFFSIFHSMALPRFTNSQSILFDEGLLI 60

Query: 609 -------SGLAVLAEQLNFNRMFSYKYNRYTTLD-------------GAGGSDCVVCLSR 490
                  S L VLAEQLN NR+FSY+Y      D             G GGSDCVVCL  
Sbjct: 61  DSMGSGLSSLIVLAEQLNVNRLFSYRYRSCGGNDDNHNRGGAGAGAGGGGGSDCVVCLCA 120

Query: 489 LKNGEYVRRLACKHVFHKECFDGWLDHLNFNCPLCRSSLVGSGERVGLEVARDGGS*HPL 310
           L +G+ VR+L C+HVFHK+CFD WL  L FNCPLCRS LV SG+RV    +R  G     
Sbjct: 121 LSDGDQVRKLDCRHVFHKDCFDDWLRQLKFNCPLCRSPLV-SGQRVLSTRSRVAGD---- 175

Query: 309 TFLVRWLS 286
             LV W S
Sbjct: 176 --LVAWFS 181


>ref|XP_002892849.1| ring-H2 finger A2A [Arabidopsis lyrata subsp. lyrata]
           gi|297338691|gb|EFH69108.1| ring-H2 finger A2A
           [Arabidopsis lyrata subsp. lyrata]
          Length = 146

 Score =  144 bits (362), Expect = 4e-32
 Identities = 75/136 (55%), Positives = 97/136 (71%), Gaps = 3/136 (2%)
 Frame = -1

Query: 768 MGLQNQMNDVSSESFPILILLLIAKGVGYLRSILLAILHSLNLSHDDSPEAVTSGLA--- 598
           MGLQ Q++DVSS+S P+++L L+A  + +LRS LL +    N +      +V SGLA   
Sbjct: 1   MGLQGQLSDVSSDSIPLMLLSLLAVFINHLRSFLLRLTAKSNHNLPVDDVSVASGLANII 60

Query: 597 VLAEQLNFNRMFSYKYNRYTTLDGAGGSDCVVCLSRLKNGEYVRRLACKHVFHKECFDGW 418
           VLA+QL+ NR+FSY+       DG GGSDCVVCLS+LK GE VR+L C+HVFHK+C +GW
Sbjct: 61  VLADQLSLNRLFSYRCG-----DG-GGSDCVVCLSKLKEGEEVRKLECRHVFHKKCLEGW 114

Query: 417 LDHLNFNCPLCRSSLV 370
           L  LNF CPLCRS+LV
Sbjct: 115 LHQLNFTCPLCRSALV 130


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