BLASTX nr result

ID: Cnidium21_contig00012679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012679
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510089.1| XPA-binding protein, putative [Ricinus commu...    91   3e-19
ref|XP_002320027.1| predicted protein [Populus trichocarpa] gi|2...    90   5e-19
ref|XP_003628593.1| GPN-loop GTPase [Medicago truncatula] gi|355...    90   6e-19
ref|XP_003628594.1| GPN-loop GTPase [Medicago truncatula] gi|355...    90   6e-19
ref|XP_003523622.1| PREDICTED: GPN-loop GTPase 2-like [Glycine max]    87   4e-18

>ref|XP_002510089.1| XPA-binding protein, putative [Ricinus communis]
           gi|223550790|gb|EEF52276.1| XPA-binding protein,
           putative [Ricinus communis]
          Length = 296

 Score = 90.5 bits (223), Expect(2) = 3e-19
 Identities = 52/107 (48%), Positives = 58/107 (54%)
 Frame = +1

Query: 229 NTNNVIMKLIKKLNLQLIVVHLIDSHICIDPEKYVXXXXXXXXXXXXXXXPHGSVLSKID 408
           N  NVIMKLIKKLNL+L  VHL+D+H+C DP KYV               PH +VLSKID
Sbjct: 117 NAKNVIMKLIKKLNLRLTAVHLVDAHLCSDPAKYVSALLLSLSTMLHLELPHINVLSKID 176

Query: 409 LIESYGXXXXXXXXXXXXXXXXXXXXXXXXGFNLDFCTDVEDLFYLQ 549
           LIESYG                         FNLDF TDV+DL YLQ
Sbjct: 177 LIESYG----------------------KLAFNLDFFTDVQDLSYLQ 201



 Score = 30.4 bits (67), Expect(2) = 3e-19
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 140 LLNDFSELRLDHYFLFSFPCQVDLLFL 220
           L +    L  DHY LF FP QV+L FL
Sbjct: 88  LQSKLEPLLKDHYLLFDFPGQVELFFL 114


>ref|XP_002320027.1| predicted protein [Populus trichocarpa] gi|222860800|gb|EEE98342.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score = 89.7 bits (221), Expect(2) = 5e-19
 Identities = 52/109 (47%), Positives = 59/109 (54%)
 Frame = +1

Query: 229 NTNNVIMKLIKKLNLQLIVVHLIDSHICIDPEKYVXXXXXXXXXXXXXXXPHGSVLSKID 408
           N  NVIMKLIKKL+L+L  VHL+D+H+C DP KYV               PH +VLSKID
Sbjct: 117 NAKNVIMKLIKKLSLRLTAVHLVDAHLCSDPGKYVSALLLSLSTMLHLELPHINVLSKID 176

Query: 409 LIESYGXXXXXXXXXXXXXXXXXXXXXXXXGFNLDFCTDVEDLFYLQKQ 555
           LIESYG                         FNLDF TDV+DL YLQ Q
Sbjct: 177 LIESYG----------------------KLAFNLDFYTDVQDLSYLQDQ 203



 Score = 30.4 bits (67), Expect(2) = 5e-19
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 140 LLNDFSELRLDHYFLFSFPCQVDLLFL 220
           L +    L  DHY LF FP QV+L FL
Sbjct: 88  LQSKLEPLLKDHYLLFDFPGQVELFFL 114


>ref|XP_003628593.1| GPN-loop GTPase [Medicago truncatula] gi|355522615|gb|AET03069.1|
           GPN-loop GTPase [Medicago truncatula]
          Length = 373

 Score = 89.7 bits (221), Expect(2) = 6e-19
 Identities = 51/107 (47%), Positives = 58/107 (54%)
 Frame = +1

Query: 229 NTNNVIMKLIKKLNLQLIVVHLIDSHICIDPEKYVXXXXXXXXXXXXXXXPHGSVLSKID 408
           N  NVIMKLIKKLNL+L  VHL+D+H+C DP KY+               PH +VLSKID
Sbjct: 117 NAKNVIMKLIKKLNLRLTAVHLVDAHLCSDPGKYISALLLTLSTMLHMELPHINVLSKID 176

Query: 409 LIESYGXXXXXXXXXXXXXXXXXXXXXXXXGFNLDFCTDVEDLFYLQ 549
           LIESYG                         FNLDF TDV+DL YLQ
Sbjct: 177 LIESYG----------------------KLAFNLDFYTDVQDLSYLQ 201



 Score = 30.0 bits (66), Expect(2) = 6e-19
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 170 DHYFLFSFPCQVDLLFL 220
           DHY LF FP QV+L FL
Sbjct: 98  DHYLLFDFPGQVELFFL 114


>ref|XP_003628594.1| GPN-loop GTPase [Medicago truncatula] gi|355522616|gb|AET03070.1|
           GPN-loop GTPase [Medicago truncatula]
          Length = 296

 Score = 89.7 bits (221), Expect(2) = 6e-19
 Identities = 51/107 (47%), Positives = 58/107 (54%)
 Frame = +1

Query: 229 NTNNVIMKLIKKLNLQLIVVHLIDSHICIDPEKYVXXXXXXXXXXXXXXXPHGSVLSKID 408
           N  NVIMKLIKKLNL+L  VHL+D+H+C DP KY+               PH +VLSKID
Sbjct: 117 NAKNVIMKLIKKLNLRLTAVHLVDAHLCSDPGKYISALLLTLSTMLHMELPHINVLSKID 176

Query: 409 LIESYGXXXXXXXXXXXXXXXXXXXXXXXXGFNLDFCTDVEDLFYLQ 549
           LIESYG                         FNLDF TDV+DL YLQ
Sbjct: 177 LIESYG----------------------KLAFNLDFYTDVQDLSYLQ 201



 Score = 30.0 bits (66), Expect(2) = 6e-19
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 170 DHYFLFSFPCQVDLLFL 220
           DHY LF FP QV+L FL
Sbjct: 98  DHYLLFDFPGQVELFFL 114


>ref|XP_003523622.1| PREDICTED: GPN-loop GTPase 2-like [Glycine max]
          Length = 301

 Score = 87.0 bits (214), Expect(2) = 4e-18
 Identities = 50/107 (46%), Positives = 58/107 (54%)
 Frame = +1

Query: 229 NTNNVIMKLIKKLNLQLIVVHLIDSHICIDPEKYVXXXXXXXXXXXXXXXPHGSVLSKID 408
           +  NVI+KLIKKLNL+L  VHLID+H+C DP KY+               PH +VLSKID
Sbjct: 117 SAKNVILKLIKKLNLRLTAVHLIDAHLCSDPGKYISALILSLSTMLHLELPHINVLSKID 176

Query: 409 LIESYGXXXXXXXXXXXXXXXXXXXXXXXXGFNLDFCTDVEDLFYLQ 549
           LIESYG                         FNLDF TDV+DL YLQ
Sbjct: 177 LIESYG----------------------KLAFNLDFYTDVQDLSYLQ 201



 Score = 30.0 bits (66), Expect(2) = 4e-18
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 170 DHYFLFSFPCQVDLLFL 220
           DHY LF FP QV+L FL
Sbjct: 98  DHYLLFDFPGQVELFFL 114


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