BLASTX nr result
ID: Cnidium21_contig00012679
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00012679 (633 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002510089.1| XPA-binding protein, putative [Ricinus commu... 91 3e-19 ref|XP_002320027.1| predicted protein [Populus trichocarpa] gi|2... 90 5e-19 ref|XP_003628593.1| GPN-loop GTPase [Medicago truncatula] gi|355... 90 6e-19 ref|XP_003628594.1| GPN-loop GTPase [Medicago truncatula] gi|355... 90 6e-19 ref|XP_003523622.1| PREDICTED: GPN-loop GTPase 2-like [Glycine max] 87 4e-18 >ref|XP_002510089.1| XPA-binding protein, putative [Ricinus communis] gi|223550790|gb|EEF52276.1| XPA-binding protein, putative [Ricinus communis] Length = 296 Score = 90.5 bits (223), Expect(2) = 3e-19 Identities = 52/107 (48%), Positives = 58/107 (54%) Frame = +1 Query: 229 NTNNVIMKLIKKLNLQLIVVHLIDSHICIDPEKYVXXXXXXXXXXXXXXXPHGSVLSKID 408 N NVIMKLIKKLNL+L VHL+D+H+C DP KYV PH +VLSKID Sbjct: 117 NAKNVIMKLIKKLNLRLTAVHLVDAHLCSDPAKYVSALLLSLSTMLHLELPHINVLSKID 176 Query: 409 LIESYGXXXXXXXXXXXXXXXXXXXXXXXXGFNLDFCTDVEDLFYLQ 549 LIESYG FNLDF TDV+DL YLQ Sbjct: 177 LIESYG----------------------KLAFNLDFFTDVQDLSYLQ 201 Score = 30.4 bits (67), Expect(2) = 3e-19 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +2 Query: 140 LLNDFSELRLDHYFLFSFPCQVDLLFL 220 L + L DHY LF FP QV+L FL Sbjct: 88 LQSKLEPLLKDHYLLFDFPGQVELFFL 114 >ref|XP_002320027.1| predicted protein [Populus trichocarpa] gi|222860800|gb|EEE98342.1| predicted protein [Populus trichocarpa] Length = 301 Score = 89.7 bits (221), Expect(2) = 5e-19 Identities = 52/109 (47%), Positives = 59/109 (54%) Frame = +1 Query: 229 NTNNVIMKLIKKLNLQLIVVHLIDSHICIDPEKYVXXXXXXXXXXXXXXXPHGSVLSKID 408 N NVIMKLIKKL+L+L VHL+D+H+C DP KYV PH +VLSKID Sbjct: 117 NAKNVIMKLIKKLSLRLTAVHLVDAHLCSDPGKYVSALLLSLSTMLHLELPHINVLSKID 176 Query: 409 LIESYGXXXXXXXXXXXXXXXXXXXXXXXXGFNLDFCTDVEDLFYLQKQ 555 LIESYG FNLDF TDV+DL YLQ Q Sbjct: 177 LIESYG----------------------KLAFNLDFYTDVQDLSYLQDQ 203 Score = 30.4 bits (67), Expect(2) = 5e-19 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +2 Query: 140 LLNDFSELRLDHYFLFSFPCQVDLLFL 220 L + L DHY LF FP QV+L FL Sbjct: 88 LQSKLEPLLKDHYLLFDFPGQVELFFL 114 >ref|XP_003628593.1| GPN-loop GTPase [Medicago truncatula] gi|355522615|gb|AET03069.1| GPN-loop GTPase [Medicago truncatula] Length = 373 Score = 89.7 bits (221), Expect(2) = 6e-19 Identities = 51/107 (47%), Positives = 58/107 (54%) Frame = +1 Query: 229 NTNNVIMKLIKKLNLQLIVVHLIDSHICIDPEKYVXXXXXXXXXXXXXXXPHGSVLSKID 408 N NVIMKLIKKLNL+L VHL+D+H+C DP KY+ PH +VLSKID Sbjct: 117 NAKNVIMKLIKKLNLRLTAVHLVDAHLCSDPGKYISALLLTLSTMLHMELPHINVLSKID 176 Query: 409 LIESYGXXXXXXXXXXXXXXXXXXXXXXXXGFNLDFCTDVEDLFYLQ 549 LIESYG FNLDF TDV+DL YLQ Sbjct: 177 LIESYG----------------------KLAFNLDFYTDVQDLSYLQ 201 Score = 30.0 bits (66), Expect(2) = 6e-19 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +2 Query: 170 DHYFLFSFPCQVDLLFL 220 DHY LF FP QV+L FL Sbjct: 98 DHYLLFDFPGQVELFFL 114 >ref|XP_003628594.1| GPN-loop GTPase [Medicago truncatula] gi|355522616|gb|AET03070.1| GPN-loop GTPase [Medicago truncatula] Length = 296 Score = 89.7 bits (221), Expect(2) = 6e-19 Identities = 51/107 (47%), Positives = 58/107 (54%) Frame = +1 Query: 229 NTNNVIMKLIKKLNLQLIVVHLIDSHICIDPEKYVXXXXXXXXXXXXXXXPHGSVLSKID 408 N NVIMKLIKKLNL+L VHL+D+H+C DP KY+ PH +VLSKID Sbjct: 117 NAKNVIMKLIKKLNLRLTAVHLVDAHLCSDPGKYISALLLTLSTMLHMELPHINVLSKID 176 Query: 409 LIESYGXXXXXXXXXXXXXXXXXXXXXXXXGFNLDFCTDVEDLFYLQ 549 LIESYG FNLDF TDV+DL YLQ Sbjct: 177 LIESYG----------------------KLAFNLDFYTDVQDLSYLQ 201 Score = 30.0 bits (66), Expect(2) = 6e-19 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +2 Query: 170 DHYFLFSFPCQVDLLFL 220 DHY LF FP QV+L FL Sbjct: 98 DHYLLFDFPGQVELFFL 114 >ref|XP_003523622.1| PREDICTED: GPN-loop GTPase 2-like [Glycine max] Length = 301 Score = 87.0 bits (214), Expect(2) = 4e-18 Identities = 50/107 (46%), Positives = 58/107 (54%) Frame = +1 Query: 229 NTNNVIMKLIKKLNLQLIVVHLIDSHICIDPEKYVXXXXXXXXXXXXXXXPHGSVLSKID 408 + NVI+KLIKKLNL+L VHLID+H+C DP KY+ PH +VLSKID Sbjct: 117 SAKNVILKLIKKLNLRLTAVHLIDAHLCSDPGKYISALILSLSTMLHLELPHINVLSKID 176 Query: 409 LIESYGXXXXXXXXXXXXXXXXXXXXXXXXGFNLDFCTDVEDLFYLQ 549 LIESYG FNLDF TDV+DL YLQ Sbjct: 177 LIESYG----------------------KLAFNLDFYTDVQDLSYLQ 201 Score = 30.0 bits (66), Expect(2) = 4e-18 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +2 Query: 170 DHYFLFSFPCQVDLLFL 220 DHY LF FP QV+L FL Sbjct: 98 DHYLLFDFPGQVELFFL 114