BLASTX nr result

ID: Cnidium21_contig00012661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012661
         (2229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274655.1| PREDICTED: uncharacterized protein LOC100258...   528   e-147
ref|XP_002323389.1| predicted protein [Populus trichocarpa] gi|2...   511   e-142
ref|XP_002532550.1| conserved hypothetical protein [Ricinus comm...   495   e-137
ref|XP_004136512.1| PREDICTED: mediator of RNA polymerase II tra...   478   e-132
ref|XP_003521495.1| PREDICTED: uncharacterized protein LOC100796...   475   e-131

>ref|XP_002274655.1| PREDICTED: uncharacterized protein LOC100258667 [Vitis vinifera]
            gi|296085885|emb|CBI31209.3| unnamed protein product
            [Vitis vinifera]
          Length = 419

 Score =  528 bits (1361), Expect = e-147
 Identities = 270/399 (67%), Positives = 319/399 (79%), Gaps = 5/399 (1%)
 Frame = +2

Query: 827  EAPPKQVALAMDRLNHAGRLIADIRLGADRLLEAMFMAGENQQSNKPFKLIVQEESSMRQ 1006
            EAPPKQVALAMDRL  A RLIAD+RLGADRLLEA+F++ +  Q+ KP  L ++E+SSMRQ
Sbjct: 21   EAPPKQVALAMDRLAQAARLIADVRLGADRLLEALFVSAQPHQTTKPLHLFLKEDSSMRQ 80

Query: 1007 YLQDLRTVGKQLEDSGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAV 1186
            +LQDLRT+GKQLEDSGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAV
Sbjct: 81   HLQDLRTIGKQLEDSGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAV 140

Query: 1187 DRTRLALKAFTDQKKRFFPHLDD-----DNETGSPLKKHCDKQTSTGXXXXXXXXLATVS 1351
            DRTRLALKAFTDQK+RFFPHLDD      + + S  KKHC  Q ST           T+S
Sbjct: 141  DRTRLALKAFTDQKRRFFPHLDDGLNGQSSASESVPKKHCGSQISTVTQQEELSDYRTLS 200

Query: 1352 DILLCLEKEVHDVKSFTYPRLKWLKRASLLPMSSSEPFMDPSKEHSFHNSNKLGHTTMKD 1531
            D+L+ +EK++ ++K FTY RL WLKRAS LP S+ E  MD SKEH FH SNK     +  
Sbjct: 201  DVLMHVEKDMPNMKIFTYQRLDWLKRASTLPCSAEEFLMDSSKEHDFHISNKPRLGLLGA 260

Query: 1532 NAAEKISVIELLFPSIFRAVLSLHPAGSVYPDSVAFFSPDEGGSYLHARGFSVHRVFRHI 1711
             AA+K++VIELLFPSIFRA++SLHPAGS+ PD+VAFFSPDEGGSY+HARGFSV+ VF+H+
Sbjct: 261  VAADKVAVIELLFPSIFRAIISLHPAGSIDPDAVAFFSPDEGGSYVHARGFSVYHVFKHV 320

Query: 1712 TEHAAIALQYFTGISTETALHSLLLWICSYRTLFTKVCSKCGRLLSMDKQSALMLPPVQR 1891
            TEHAA+ALQ+F G +TETAL+SLL WI SY+TLFT+ CSKC RLLSMD+QS L+LPPV  
Sbjct: 321  TEHAAMALQHFLGTNTETALYSLLHWIFSYQTLFTEPCSKCKRLLSMDRQSDLLLPPVYH 380

Query: 1892 PYRDFPVGKFTSSEQSSATNHYQIIDSIEAYHIGCFPEE 2008
            PYR F   K +SS QS ++   Q +D+  AYH+GCF EE
Sbjct: 381  PYRSFCAIK-SSSPQSISSTKNQTLDASHAYHVGCFSEE 418


>ref|XP_002323389.1| predicted protein [Populus trichocarpa] gi|222868019|gb|EEF05150.1|
            predicted protein [Populus trichocarpa]
          Length = 417

 Score =  511 bits (1315), Expect = e-142
 Identities = 255/399 (63%), Positives = 318/399 (79%), Gaps = 4/399 (1%)
 Frame = +2

Query: 827  EAPPKQVALAMDRLNHAGRLIADIRLGADRLLEAMFMAGENQQSNKPFKLIVQEESSMRQ 1006
            +APPKQVALAM+RL  A RLIAD+RLGADRLLEA+F+A    QSNKP +L V+E++SMRQ
Sbjct: 21   DAPPKQVALAMERLGQASRLIADVRLGADRLLEALFIAAVPHQSNKPLQLFVKEDASMRQ 80

Query: 1007 YLQDLRTVGKQLEDSGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAV 1186
            +LQDLR+VG+QLE+SGVLNE+LRSRSNSWGLH+P+VCPDGAVVAYAWKRQLAGQAGASAV
Sbjct: 81   HLQDLRSVGRQLEESGVLNETLRSRSNSWGLHLPVVCPDGAVVAYAWKRQLAGQAGASAV 140

Query: 1187 DRTRLALKAFTDQKKRFFPHLDDDNETGSP---LKKHCDKQTSTGXXXXXXXXLATVSDI 1357
            DRTRLALKAFTDQK+RFFPHLD+  +  S     KKHC  +              T+SD+
Sbjct: 141  DRTRLALKAFTDQKRRFFPHLDEGQDVQSTEPASKKHCIPKDLLLNYQEELSDCKTLSDV 200

Query: 1358 LLCLEKEVHDVKSFTYPRLKWLKRASLLPMSSSEPFMDPSKEHSFHNSNKLGHTTMKDNA 1537
            L CLEKE+ ++K  TY RL W KRAS LP S+SE  +D SK+H FH+ +KL   +    A
Sbjct: 201  LTCLEKEMLNLKVLTYERLDWFKRASSLPASASENPLDTSKDHGFHSLSKLRTVSQSAAA 260

Query: 1538 AEKISVIELLFPSIFRAVLSLHPAGSVYPDSVAFFSPDEGGSYLHARGFSVHRVFRHITE 1717
             +KI+VIEL FPS+FRA++SLHPAGS+ PD+VAFFSPDEGGSY+HARGFSVH VFR I+E
Sbjct: 261  TDKIAVIELFFPSVFRAIISLHPAGSIDPDAVAFFSPDEGGSYIHARGFSVHHVFRKISE 320

Query: 1718 HAAIALQYFTGISTETALHSLLLWICSYRTLFTKVCSKCGRLLSMDKQSALMLPPVQRPY 1897
            HAA+ALQ+F G+S+ TAL+S++ WIC Y+TLFTKVCSKCG+LL+MD++S L+LPPV RPY
Sbjct: 321  HAAMALQHFLGVSSRTALYSIVHWICCYQTLFTKVCSKCGKLLAMDRKSMLLLPPVYRPY 380

Query: 1898 RDFPVGKFTSSE-QSSATNHYQIIDSIEAYHIGCFPEEI 2011
              F   +  S++  SSA +H   ++++ A+HIGCF EE+
Sbjct: 381  LHFSTLQIASTQTNSSAKDHG--LENLGAFHIGCFTEEL 417


>ref|XP_002532550.1| conserved hypothetical protein [Ricinus communis]
            gi|223527739|gb|EEF29844.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 434

 Score =  495 bits (1274), Expect = e-137
 Identities = 257/401 (64%), Positives = 309/401 (77%), Gaps = 7/401 (1%)
 Frame = +2

Query: 827  EAPPKQVALAMDRLNHAGRLIADIRLGADRLLEAMFMAGENQQSNKPFKLIVQEESSMRQ 1006
            +APPKQVA+AMDRL+ A RLIAD+RLGADRLLEA+FM+ +  QS KP  L ++E+++MRQ
Sbjct: 34   DAPPKQVAMAMDRLSQAARLIADVRLGADRLLEALFMSAQPHQSKKPLLLFIKEDAAMRQ 93

Query: 1007 YLQDLRTVGKQLEDSGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAV 1186
            +LQDLR+VG+QLE+SGVLN+SLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAV
Sbjct: 94   HLQDLRSVGRQLEESGVLNDSLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAV 153

Query: 1187 DRTRLALKAFTDQKKRFFPHLD---DDNETGSPLKKHCDKQT--STGXXXXXXXXLATVS 1351
            DRTRLALKAFTDQK+RFFPHLD   D   T S  KK C  Q                T+S
Sbjct: 154  DRTRLALKAFTDQKRRFFPHLDDGVDGQNTESVSKKQCSLQVVPPVTLLVEELSDCKTLS 213

Query: 1352 DILLCLEKEVHDVKSFTYPRLKWLKRASLLPMSSSEPFMDPSKEHSFHNSNKL--GHTTM 1525
            D+L  LEKE+ +VK  T+ RL WLKRAS LP   SE  ++ SKEH+FH  NKL  G  + 
Sbjct: 214  DVLTRLEKEIPNVKISTFERLDWLKRASSLPAPVSENPIETSKEHTFHTLNKLRTGSQSA 273

Query: 1526 KDNAAEKISVIELLFPSIFRAVLSLHPAGSVYPDSVAFFSPDEGGSYLHARGFSVHRVFR 1705
                 +K++VIELL PS+FRA++SLHPAGS+ PD+VAFFSPDEGGSY+HAR FSVH VFR
Sbjct: 274  VSVPTDKVAVIELLSPSVFRALVSLHPAGSIDPDAVAFFSPDEGGSYIHARSFSVHHVFR 333

Query: 1706 HITEHAAIALQYFTGISTETALHSLLLWICSYRTLFTKVCSKCGRLLSMDKQSALMLPPV 1885
             ITEHAA+ALQ+F GI  E AL +LL WICSY+TLF+KVCSKCGRLL+MD++S+L+LPPV
Sbjct: 334  QITEHAAMALQHFLGIKAEIALFTLLHWICSYQTLFSKVCSKCGRLLAMDRKSSLLLPPV 393

Query: 1886 QRPYRDFPVGKFTSSEQSSATNHYQIIDSIEAYHIGCFPEE 2008
             RPYR F   +  S++  S+T   Q +D   AYH GCF E+
Sbjct: 394  HRPYRHFSPLESPSTQPISSTKD-QGLDFPGAYHTGCFSED 433


>ref|XP_004136512.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            27-like [Cucumis sativus]
            gi|449515406|ref|XP_004164740.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 27-like [Cucumis
            sativus]
          Length = 421

 Score =  478 bits (1230), Expect = e-132
 Identities = 246/397 (61%), Positives = 299/397 (75%), Gaps = 2/397 (0%)
 Frame = +2

Query: 827  EAPPKQVALAMDRLNHAGRLIADIRLGADRLLEAMFMAGENQQSNKPFKLIVQEESSMRQ 1006
            +APPKQVALAMDRL HA RLIADIRLGADRLLEA+ +  +  QS+KP  L  +E++SMRQ
Sbjct: 27   DAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSSKPLHLFQKEDASMRQ 86

Query: 1007 YLQDLRTVGKQLEDSGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAV 1186
            +L DLR VGKQLE+SGVL+ESL SRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAV
Sbjct: 87   HLLDLRAVGKQLEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAV 146

Query: 1187 DRTRLALKAFTDQKKRFFPHLDDDNETGS--PLKKHCDKQTSTGXXXXXXXXLATVSDIL 1360
            DRTRLALKAFTDQK+RFFPHL+D+N + +   LKK C     T           ++SDIL
Sbjct: 147  DRTRLALKAFTDQKRRFFPHLEDENASNNEPALKKPCFSHGVTDVKQNELIDSRSLSDIL 206

Query: 1361 LCLEKEVHDVKSFTYPRLKWLKRASLLPMSSSEPFMDPSKEHSFHNSNKLGHTTMKDNAA 1540
             C+EKEV ++K FTY RL WLK+AS LP  ++E  +   KEHS+H S ++    +    A
Sbjct: 207  SCMEKEVPELKIFTYERLDWLKQASALPSQANENSIGALKEHSYH-SPRMSPGALGATPA 265

Query: 1541 EKISVIELLFPSIFRAVLSLHPAGSVYPDSVAFFSPDEGGSYLHARGFSVHRVFRHITEH 1720
            +K  VIEL+ PS+FRAV+SLHP GSV PD++AFFSPDE GS++HARGFS + +FRH+TEH
Sbjct: 266  DKAGVIELIIPSVFRAVVSLHPVGSVEPDALAFFSPDERGSHVHARGFSNYHLFRHVTEH 325

Query: 1721 AAIALQYFTGISTETALHSLLLWICSYRTLFTKVCSKCGRLLSMDKQSALMLPPVQRPYR 1900
            AA  LQYF G   + AL+ LLLWICSY+ LF+K CSKCGR LS++KQS L+LPP  RPY+
Sbjct: 326  AATVLQYFLGNQPKAALYPLLLWICSYQNLFSKACSKCGRRLSVNKQSDLLLPPAVRPYK 385

Query: 1901 DFPVGKFTSSEQSSATNHYQIIDSIEAYHIGCFPEEI 2011
             F   K  SS     +   Q +DS++A+HI CF EEI
Sbjct: 386  QFCASK-NSSVVPITSLKDQKLDSVQAFHIDCFSEEI 421


>ref|XP_003521495.1| PREDICTED: uncharacterized protein LOC100796886 [Glycine max]
          Length = 425

 Score =  475 bits (1223), Expect = e-131
 Identities = 246/397 (61%), Positives = 300/397 (75%), Gaps = 2/397 (0%)
 Frame = +2

Query: 824  TEAPPKQVALAMDRLNHAGRLIADIRLGADRLLEAMFMAG-ENQQSNKPFKLIVQEESSM 1000
            +EAPPKQVA AMD+L  A R+IADIR+GADRLLEA+F+A  +  Q NKP ++ ++E++ M
Sbjct: 36   SEAPPKQVAQAMDKLGQAERIIADIRIGADRLLEALFVAAAQPHQGNKPLQVFLKEDACM 95

Query: 1001 RQYLQDLRTVGKQLEDSGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGAS 1180
            RQYLQDLR++GK+LE+SGVL+ES+RSR + WGLHMPLVCPDGAVVAYAWKRQLAGQAGAS
Sbjct: 96   RQYLQDLRSLGKELEESGVLSESVRSRKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGAS 155

Query: 1181 AVDRTRLALKAFTDQKKRFFPHLDDDNETG-SPLKKHCDKQTSTGXXXXXXXXLATVSDI 1357
            AVDRTRLALKAFTDQK+RFFPHLDD  ET  S  KK C  +            L T+ D+
Sbjct: 156  AVDRTRLALKAFTDQKRRFFPHLDDGLETSESASKKCCGSEEIAVDPKEGISFLRTLPDV 215

Query: 1358 LLCLEKEVHDVKSFTYPRLKWLKRASLLPMSSSEPFMDPSKEHSFHNSNKLGHTTMKDNA 1537
            L  LEK+V ++K  T+ RL WLKRAS L +S++E ++    EH++H SNKL   ++    
Sbjct: 216  LKSLEKDVPNLKILTFERLDWLKRASTLTLSTNENYL----EHNYHGSNKLRLGSVGTVP 271

Query: 1538 AEKISVIELLFPSIFRAVLSLHPAGSVYPDSVAFFSPDEGGSYLHARGFSVHRVFRHITE 1717
            AEK++VIELLFP +FRAV+SLHPAGS+ PD VAFF+PDE GSY+HARGFSVH VFRHITE
Sbjct: 272  AEKVAVIELLFPCVFRAVISLHPAGSMDPDVVAFFAPDESGSYVHARGFSVHHVFRHITE 331

Query: 1718 HAAIALQYFTGISTETALHSLLLWICSYRTLFTKVCSKCGRLLSMDKQSALMLPPVQRPY 1897
            +AA ALQYF G  +ET L+ LL WICSY+TLF+K CSKC RLL+MDKQS L+LPPV RPY
Sbjct: 332  YAATALQYFLGNQSETCLYFLLHWICSYQTLFSKPCSKCSRLLAMDKQSTLLLPPVHRPY 391

Query: 1898 RDFPVGKFTSSEQSSATNHYQIIDSIEAYHIGCFPEE 2008
              F   K   +  S   N     D+ +AYHI C  EE
Sbjct: 392  WQFSFSKILLNISSKDQNS----DTTQAYHIDCLSEE 424


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