BLASTX nr result

ID: Cnidium21_contig00012648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012648
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN32988.1| beta-tubulin 1 [Gossypium hirsutum]                    254   7e-66
sp|P12459.1|TBB1_SOYBN RecName: Full=Tubulin beta-1 chain; AltNa...   253   1e-65
ref|XP_003532738.1| PREDICTED: tubulin beta-1 chain-like [Glycin...   253   1e-65
ref|XP_003525399.1| PREDICTED: tubulin beta-1 chain-like [Glycin...   253   1e-65
gb|AEN19689.1| beta-tubulin [Cymbidium faberi]                        253   1e-65

>gb|AAN32988.1| beta-tubulin 1 [Gossypium hirsutum]
          Length = 444

 Score =  254 bits (648), Expect = 7e-66
 Identities = 121/122 (99%), Positives = 122/122 (100%)
 Frame = -1

Query: 368 VENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRK 189
           VENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRK
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRK 252

Query: 188 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDSKNMMCAADPRHGRYLT 9
           LAVNLIPFPRLHFFMVGFAPLTSRGSQQYR+LTIPELTQQMWDSKNMMCAADPRHGRYLT
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDSKNMMCAADPRHGRYLT 312

Query: 8   AS 3
           AS
Sbjct: 313 AS 314


>sp|P12459.1|TBB1_SOYBN RecName: Full=Tubulin beta-1 chain; AltName: Full=Beta-1-tubulin
           gi|170060|gb|AAA34009.1| S-beta-1 tubulin [Glycine max]
          Length = 445

 Score =  253 bits (645), Expect = 1e-65
 Identities = 120/122 (98%), Positives = 122/122 (100%)
 Frame = -1

Query: 368 VENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRK 189
           VENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRK
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRK 252

Query: 188 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDSKNMMCAADPRHGRYLT 9
           LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWD++NMMCAADPRHGRYLT
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDARNMMCAADPRHGRYLT 312

Query: 8   AS 3
           AS
Sbjct: 313 AS 314


>ref|XP_003532738.1| PREDICTED: tubulin beta-1 chain-like [Glycine max]
          Length = 445

 Score =  253 bits (645), Expect = 1e-65
 Identities = 120/122 (98%), Positives = 122/122 (100%)
 Frame = -1

Query: 368 VENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRK 189
           VENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRK
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRK 252

Query: 188 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDSKNMMCAADPRHGRYLT 9
           LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWD++NMMCAADPRHGRYLT
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDARNMMCAADPRHGRYLT 312

Query: 8   AS 3
           AS
Sbjct: 313 AS 314


>ref|XP_003525399.1| PREDICTED: tubulin beta-1 chain-like [Glycine max]
          Length = 446

 Score =  253 bits (645), Expect = 1e-65
 Identities = 120/122 (98%), Positives = 122/122 (100%)
 Frame = -1

Query: 368 VENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRK 189
           VENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRK
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRK 252

Query: 188 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDSKNMMCAADPRHGRYLT 9
           LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWD++NMMCAADPRHGRYLT
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDARNMMCAADPRHGRYLT 312

Query: 8   AS 3
           AS
Sbjct: 313 AS 314


>gb|AEN19689.1| beta-tubulin [Cymbidium faberi]
          Length = 351

 Score =  253 bits (645), Expect = 1e-65
 Identities = 120/122 (98%), Positives = 122/122 (100%)
 Frame = -1

Query: 368 VENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRK 189
           VENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRK
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRK 252

Query: 188 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDSKNMMCAADPRHGRYLT 9
           LAVNLIPFPRLHFFMVGF+PLTSRGSQQYR+LTIPELTQQMWDSKNMMCAADPRHGRYLT
Sbjct: 253 LAVNLIPFPRLHFFMVGFSPLTSRGSQQYRALTIPELTQQMWDSKNMMCAADPRHGRYLT 312

Query: 8   AS 3
           AS
Sbjct: 313 AS 314


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