BLASTX nr result
ID: Cnidium21_contig00012619
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00012619 (867 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi] 326 5e-87 gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subc... 316 4e-84 emb|CAE05248.2| OSJNBb0115I09.10 [Oryza sativa Japonica Group] 315 7e-84 gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays] 315 9e-84 gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|16... 315 1e-83 >gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi] Length = 701 Score = 326 bits (835), Expect = 5e-87 Identities = 150/276 (54%), Positives = 206/276 (74%) Frame = +1 Query: 37 YVSDGLFIINVEPLHSGLVNDNISPSVNCVESSSLWHARLGHLNFGALNNMMNLELIPKH 216 YV+DGLF +NV L +N+ + S +ESS++WH RLGH+NF +L ++N++ IP Sbjct: 428 YVNDGLFKLNVMTLKP-TINNKATSSAYLLESSNIWHGRLGHVNFNSLRKLINMKHIPNF 486 Query: 217 AIDKKTKCQVCVSAKQIRKPFHNVVRDSGILDLVHTDICEFNGMMTKDNKRYFITFIDDC 396 ID K KC+ CV AK R F + R+S LDL+H+DIC+F + T+ +YFITFIDDC Sbjct: 487 QIDLKHKCKTCVEAKLTRSSFQIIQRNSEPLDLIHSDICDFKSIQTRGGNKYFITFIDDC 546 Query: 397 SRYCYVYLLKHKDEALEKFIEYKNEAEKQTGKSLKRLRSDRGGEYMSTSFNEFCKSNGIV 576 ++YCYVYLLK KDEAL+KFI YKNE E Q + +K LRSDRGGEY+ F C+ +GI+ Sbjct: 547 TKYCYVYLLKSKDEALDKFILYKNEVENQLNRKIKELRSDRGGEYV-VPFMSLCEQSGII 605 Query: 577 HEVTPPYTPESNGVAERKNRTFTDMINSMLLNSGLPKYMWGEALNTACHILNRVPLKHMD 756 H+VT PY+P+SNG+AERKNRT +M+N+ML++SGLP+ MWGEA+ +A ++LN++P K + Sbjct: 606 HQVTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNMWGEAVLSANYLLNKIPRKQEN 665 Query: 757 TSPYELWRSRKTSLKYLRVWGCLAKVLVPEHKRKKL 864 T+PYELW+ R S K+LRVWGCLAKV+VP +K+ K+ Sbjct: 666 TTPYELWKGRSPSYKFLRVWGCLAKVVVPLNKKVKI 701 >gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1303 Score = 316 bits (810), Expect = 4e-84 Identities = 148/278 (53%), Positives = 199/278 (71%), Gaps = 1/278 (0%) Frame = +1 Query: 37 YVSDGLFIINVEPLHSGLVNDNISPSVNCVESSSLWHARLGHLNFGALNNMMNLELIPKH 216 Y S GLF ++ + + N N ++ ++ S++WH+RL H+NFG L + N+ LIPK Sbjct: 512 YDSGGLFRFSLNDMCN---NHNAVNHISEIDESNVWHSRLCHVNFGCLTRLANMSLIPKF 568 Query: 217 AIDKKTKCQVCVSAKQIRKPFH-NVVRDSGILDLVHTDICEFNGMMTKDNKRYFITFIDD 393 + K +KC CV +KQ RKP + R+ L+LVH+D+CE NG++TK K+YF+T IDD Sbjct: 569 TLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDD 628 Query: 394 CSRYCYVYLLKHKDEALEKFIEYKNEAEKQTGKSLKRLRSDRGGEYMSTSFNEFCKSNGI 573 C+R+CYVYLLK KDEAL F YK E E Q + +KRLRSDRGGEY S F FC+ GI Sbjct: 629 CTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGI 688 Query: 574 VHEVTPPYTPESNGVAERKNRTFTDMINSMLLNSGLPKYMWGEALNTACHILNRVPLKHM 753 +HE+TPPY+P+SNGVAERKNRT T+M+N+ML +GL K WGEA+ TACH+LN++P+KH Sbjct: 689 IHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVLTACHVLNKIPMKHK 748 Query: 754 DTSPYELWRSRKTSLKYLRVWGCLAKVLVPEHKRKKLG 867 + +P+E W +K +L YLR WGCLAKV VP K++KLG Sbjct: 749 EVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLG 786 >emb|CAE05248.2| OSJNBb0115I09.10 [Oryza sativa Japonica Group] Length = 1321 Score = 315 bits (808), Expect = 7e-84 Identities = 149/278 (53%), Positives = 199/278 (71%), Gaps = 1/278 (0%) Frame = +1 Query: 37 YVSDGLFIINVEPLHSGLVNDNISPSVNCVESSSLWHARLGHLNFGALNNMMNLELIPKH 216 Y S GLF ++ + + N N ++ + S++WH+RL H+NFG + + N+ LIPK Sbjct: 420 YDSGGLFRFSLNDMCN---NHNAVNHISENDESNVWHSRLCHVNFGCMTRLANMSLIPKF 476 Query: 217 AIDKKTKCQVCVSAKQIRKPFH-NVVRDSGILDLVHTDICEFNGMMTKDNKRYFITFIDD 393 + K +KC CV +KQ RKP + VR+ L+LVH+D+CE NG++TK K+YF+T IDD Sbjct: 477 TLVKGSKCHTCVQSKQPRKPHKASEVRNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDD 536 Query: 394 CSRYCYVYLLKHKDEALEKFIEYKNEAEKQTGKSLKRLRSDRGGEYMSTSFNEFCKSNGI 573 C+R+CYVYLLK KDEAL F YK E E Q + +KRLRSDRGGEY S F FC+ GI Sbjct: 537 CTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGI 596 Query: 574 VHEVTPPYTPESNGVAERKNRTFTDMINSMLLNSGLPKYMWGEALNTACHILNRVPLKHM 753 +HE+TPPY+P+SNGVAERKNRT T+M+N+ML +GL K WGEA+ TACH+LN++P+KH Sbjct: 597 IHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVLTACHVLNKIPMKHK 656 Query: 754 DTSPYELWRSRKTSLKYLRVWGCLAKVLVPEHKRKKLG 867 + +P+E W +K +L YLR WGCLAKV VP KR+KLG Sbjct: 657 EITPFEEWERKKLNLSYLRTWGCLAKVNVPIAKRRKLG 694 >gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays] Length = 1292 Score = 315 bits (807), Expect = 9e-84 Identities = 151/278 (54%), Positives = 197/278 (70%), Gaps = 1/278 (0%) Frame = +1 Query: 37 YVSDGLFIINVEPLHSGLVNDNISPSVNCVESSSLWHARLGHLNFGALNNMMNLELIPKH 216 Y GLF +++ + + LVN SV+ + S LWH+R H +FG L + N+ LIPK Sbjct: 418 YDCGGLFRLSLHDVCNKLVN-----SVHFSDESDLWHSRFCHASFGCLMRLANINLIPKF 472 Query: 217 AIDKKTKCQVCVSAKQIRKPFHNV-VRDSGILDLVHTDICEFNGMMTKDNKRYFITFIDD 393 + KK+KC VCV +KQ RKP R L+LVH+D+CE NG++TK KRYF+TFIDD Sbjct: 473 NLVKKSKCHVCVESKQPRKPHKAAEARSLAPLELVHSDLCEMNGILTKGGKRYFLTFIDD 532 Query: 394 CSRYCYVYLLKHKDEALEKFIEYKNEAEKQTGKSLKRLRSDRGGEYMSTSFNEFCKSNGI 573 +R+CYVYLLK KDEA F YK E E Q + +KRLRSDRGGEY S F+EFC +GI Sbjct: 533 STRFCYVYLLKTKDEAFNYFKAYKAEVENQLERKIKRLRSDRGGEYFSNVFDEFCVEHGI 592 Query: 574 VHEVTPPYTPESNGVAERKNRTFTDMINSMLLNSGLPKYMWGEALNTACHILNRVPLKHM 753 +HE TPP++P+SNG+AERKNRT TD++N+ML +GL K WGEA+ TACH+LNRVP K+ Sbjct: 593 IHERTPPFSPQSNGIAERKNRTLTDLVNAMLSTAGLSKAWWGEAILTACHVLNRVPTKNK 652 Query: 754 DTSPYELWRSRKTSLKYLRVWGCLAKVLVPEHKRKKLG 867 + +P+E W R+ +L YLR WGCLAKV VP +K++KLG Sbjct: 653 EITPFEEWEKRRLNLSYLRTWGCLAKVNVPINKKRKLG 690 >gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|168251067|gb|ACA21850.1| Fourf gag/pol protein [Zea mays] Length = 1279 Score = 315 bits (806), Expect = 1e-83 Identities = 151/278 (54%), Positives = 196/278 (70%), Gaps = 1/278 (0%) Frame = +1 Query: 37 YVSDGLFIINVEPLHSGLVNDNISPSVNCVESSSLWHARLGHLNFGALNNMMNLELIPKH 216 Y GLF +++ + + LVN SVN + S LWH+R H +FG L + N+ LIPK Sbjct: 378 YECGGLFRLSLHDVCNKLVN-----SVNFSDESDLWHSRFCHASFGCLMRLANINLIPKF 432 Query: 217 AIDKKTKCQVCVSAKQIRKPFHNV-VRDSGILDLVHTDICEFNGMMTKDNKRYFITFIDD 393 + KK+KC VCV +KQ RKP R L+LVH+D+CE NG++TK KRYF+TFIDD Sbjct: 433 NLVKKSKCHVCVESKQPRKPHKAAEARSLAPLELVHSDLCEMNGILTKGGKRYFLTFIDD 492 Query: 394 CSRYCYVYLLKHKDEALEKFIEYKNEAEKQTGKSLKRLRSDRGGEYMSTSFNEFCKSNGI 573 +R+CYVYLLK KDEA F YK E E Q + +KRLRSDRGGE+ S F+EFC +GI Sbjct: 493 STRFCYVYLLKTKDEAFNYFKAYKAEVENQLERKIKRLRSDRGGEFFSNLFDEFCVEHGI 552 Query: 574 VHEVTPPYTPESNGVAERKNRTFTDMINSMLLNSGLPKYMWGEALNTACHILNRVPLKHM 753 +HE TPP++P+SNG+AERKNRT TD++N+ML +GL K WGEA+ ACH+LNRVP K+ Sbjct: 553 IHERTPPFSPQSNGIAERKNRTLTDLVNAMLSTAGLSKAWWGEAILIACHVLNRVPTKNK 612 Query: 754 DTSPYELWRSRKTSLKYLRVWGCLAKVLVPEHKRKKLG 867 + +P+E W RK +L YLR WGCLAKV VP +K++KLG Sbjct: 613 EITPFEEWEKRKLNLSYLRTWGCLAKVNVPINKKRKLG 650