BLASTX nr result

ID: Cnidium21_contig00012618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012618
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30403.3| unnamed protein product [Vitis vinifera]              365   4e-99
ref|XP_003529147.1| PREDICTED: RNA polymerase II C-terminal doma...   355   5e-96
ref|XP_004167060.1| PREDICTED: RNA polymerase II C-terminal doma...   348   5e-94
ref|XP_004147918.1| PREDICTED: RNA polymerase II C-terminal doma...   348   5e-94
ref|XP_003623236.1| RNA polymerase II C-terminal domain phosphat...   342   5e-92

>emb|CBI30403.3| unnamed protein product [Vitis vinifera]
          Length = 853

 Score =  365 bits (937), Expect = 4e-99
 Identities = 174/213 (81%), Positives = 198/213 (92%)
 Frame = -1

Query: 639 IVANTNKSFEDRIEVLRSWIARETDPIRISGMSAEMKRYVEDRAFLKQYSENDSVVDNGK 460
           IVANT KSFEDRI+ LR WIARE+D +RISGMSAE+KRY++DRA LKQY+END V+DNGK
Sbjct: 149 IVANTMKSFEDRIDALRGWIARESDQVRISGMSAELKRYIDDRALLKQYTENDLVMDNGK 208

Query: 459 VYNVQAEEVPKVLESQARVVRPVIRLPEKNIVLTRINPEVRDTSVLVRLRPAWDDLKSYL 280
           +  VQ+EEV  + +S  RVVRPVIR PE+NIVLTRINPE+RDTSVLVRLRPAW+DL+SYL
Sbjct: 209 ILKVQSEEVAPLSDSHERVVRPVIRFPERNIVLTRINPEIRDTSVLVRLRPAWEDLRSYL 268

Query: 279 IAKGRKRFEVYVCTMAERDYALEMWRLLDPDAHLIGAKQLLDRVVCVKSGARKSLLNVFK 100
           IAKGRKRFEVYVCTMAERDYALEMWRLLDP+AHLIG+KQLLDRVVCVKSG+RKSLLNVF+
Sbjct: 269 IAKGRKRFEVYVCTMAERDYALEMWRLLDPEAHLIGSKQLLDRVVCVKSGSRKSLLNVFQ 328

Query: 99  DGNCHPKMAMVIDDRMKVWDDKDQPRVHVVPAF 1
           +G+CHPKMAMVIDDR+KVW+DKDQPRVHVVP F
Sbjct: 329 NGSCHPKMAMVIDDRLKVWEDKDQPRVHVVPPF 361


>ref|XP_003529147.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           2-like [Glycine max]
          Length = 830

 Score =  355 bits (910), Expect = 5e-96
 Identities = 169/213 (79%), Positives = 192/213 (90%)
 Frame = -1

Query: 639 IVANTNKSFEDRIEVLRSWIARETDPIRISGMSAEMKRYVEDRAFLKQYSENDSVVDNGK 460
           IVANT KSFEDRIE LR W++RETDP+R+ GMS+E+KRY+EDR  LKQY+E+D+VVDNGK
Sbjct: 157 IVANTMKSFEDRIEALRGWLSRETDPLRVQGMSSELKRYLEDRLLLKQYAESDTVVDNGK 216

Query: 459 VYNVQAEEVPKVLESQARVVRPVIRLPEKNIVLTRINPEVRDTSVLVRLRPAWDDLKSYL 280
           VY VQ EE P +  S  ++VRPV+RL E+NIVLTRINPE+RDTSVLVRLRPAWDDL+SYL
Sbjct: 217 VYKVQMEEAPPLSGSHEKLVRPVVRLQERNIVLTRINPEIRDTSVLVRLRPAWDDLRSYL 276

Query: 279 IAKGRKRFEVYVCTMAERDYALEMWRLLDPDAHLIGAKQLLDRVVCVKSGARKSLLNVFK 100
            AKGRKRFEVYVCTMAERDYALE+WRLLDP AHLIG KQ+L+RV+CVKSG+RKSLLNVF+
Sbjct: 277 TAKGRKRFEVYVCTMAERDYALEIWRLLDPGAHLIGLKQVLNRVICVKSGSRKSLLNVFQ 336

Query: 99  DGNCHPKMAMVIDDRMKVWDDKDQPRVHVVPAF 1
           DG CHPKMAMVIDDR KVW DKDQPRVHVVPAF
Sbjct: 337 DGVCHPKMAMVIDDRSKVWVDKDQPRVHVVPAF 369


>ref|XP_004167060.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           2-like [Cucumis sativus]
          Length = 837

 Score =  348 bits (893), Expect = 5e-94
 Identities = 167/213 (78%), Positives = 191/213 (89%)
 Frame = -1

Query: 639 IVANTNKSFEDRIEVLRSWIARETDPIRISGMSAEMKRYVEDRAFLKQYSENDSVVDNGK 460
           IVANT KSFEDRIE LR WIARE DP+RISGMSAE+KRYVEDR  LKQY E+D+V DNG+
Sbjct: 149 IVANTMKSFEDRIEALRIWIAREADPLRISGMSAELKRYVEDRLLLKQYIEHDTVNDNGR 208

Query: 459 VYNVQAEEVPKVLESQARVVRPVIRLPEKNIVLTRINPEVRDTSVLVRLRPAWDDLKSYL 280
           ++  Q EEVP +  +  +VVRP+IRL +KN+VLTRINPE+RDTSVLVRLRPAW+DL+SYL
Sbjct: 209 IFKAQLEEVPPLNGNCEKVVRPIIRLLDKNLVLTRINPEIRDTSVLVRLRPAWEDLRSYL 268

Query: 279 IAKGRKRFEVYVCTMAERDYALEMWRLLDPDAHLIGAKQLLDRVVCVKSGARKSLLNVFK 100
            A+GRKRFEVYVCTMAERDYALEMWRLLDP+AHLI  KQLL+RVVCVKSG++KSLLNVF+
Sbjct: 269 TARGRKRFEVYVCTMAERDYALEMWRLLDPEAHLIATKQLLERVVCVKSGSKKSLLNVFQ 328

Query: 99  DGNCHPKMAMVIDDRMKVWDDKDQPRVHVVPAF 1
            G+CHPKMAMVIDDR KVW+DKDQPRVHVVPAF
Sbjct: 329 SGSCHPKMAMVIDDRSKVWEDKDQPRVHVVPAF 361


>ref|XP_004147918.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           2-like [Cucumis sativus]
          Length = 829

 Score =  348 bits (893), Expect = 5e-94
 Identities = 167/213 (78%), Positives = 191/213 (89%)
 Frame = -1

Query: 639 IVANTNKSFEDRIEVLRSWIARETDPIRISGMSAEMKRYVEDRAFLKQYSENDSVVDNGK 460
           IVANT KSFEDRIE LR WIARE DP+RISGMSAE+KRYVEDR  LKQY E+D+V DNG+
Sbjct: 149 IVANTMKSFEDRIEALRIWIAREADPLRISGMSAELKRYVEDRLLLKQYIEHDTVNDNGR 208

Query: 459 VYNVQAEEVPKVLESQARVVRPVIRLPEKNIVLTRINPEVRDTSVLVRLRPAWDDLKSYL 280
           ++  Q EEVP +  +  +VVRP+IRL +KN+VLTRINPE+RDTSVLVRLRPAW+DL+SYL
Sbjct: 209 IFKAQLEEVPPLNGNCEKVVRPIIRLLDKNLVLTRINPEIRDTSVLVRLRPAWEDLRSYL 268

Query: 279 IAKGRKRFEVYVCTMAERDYALEMWRLLDPDAHLIGAKQLLDRVVCVKSGARKSLLNVFK 100
            A+GRKRFEVYVCTMAERDYALEMWRLLDP+AHLI  KQLL+RVVCVKSG++KSLLNVF+
Sbjct: 269 TARGRKRFEVYVCTMAERDYALEMWRLLDPEAHLIATKQLLERVVCVKSGSKKSLLNVFQ 328

Query: 99  DGNCHPKMAMVIDDRMKVWDDKDQPRVHVVPAF 1
            G+CHPKMAMVIDDR KVW+DKDQPRVHVVPAF
Sbjct: 329 SGSCHPKMAMVIDDRSKVWEDKDQPRVHVVPAF 361


>ref|XP_003623236.1| RNA polymerase II C-terminal domain phosphatase-like protein
           [Medicago truncatula] gi|355498251|gb|AES79454.1| RNA
           polymerase II C-terminal domain phosphatase-like protein
           [Medicago truncatula]
          Length = 796

 Score =  342 bits (876), Expect = 5e-92
 Identities = 165/214 (77%), Positives = 190/214 (88%), Gaps = 1/214 (0%)
 Frame = -1

Query: 639 IVANTNKSFEDRIEVLRSWIARETDPIRISGMSAEMKRYVEDRAFLKQYSENDSVVD-NG 463
           IVANT KSFEDRI+ LRSW++RETDP R+ GMS E+KRY+EDR  LKQ++E+D VVD NG
Sbjct: 150 IVANTMKSFEDRIDALRSWLSRETDPSRVQGMSGELKRYLEDRLLLKQFAESDCVVDGNG 209

Query: 462 KVYNVQAEEVPKVLESQARVVRPVIRLPEKNIVLTRINPEVRDTSVLVRLRPAWDDLKSY 283
           + Y VQ EEVP +  S+ +V+RPV+RL ++NIVLTRINPE+RDTSVLVRLRPAW+DL+ Y
Sbjct: 210 RQYQVQMEEVPSL--SEQKVMRPVVRLQDRNIVLTRINPEIRDTSVLVRLRPAWEDLRCY 267

Query: 282 LIAKGRKRFEVYVCTMAERDYALEMWRLLDPDAHLIGAKQLLDRVVCVKSGARKSLLNVF 103
           L AKGRKRFEVYVCTMAERDYALEMWRLLDP AHLIG+KQ+ DRV+CVKSG+RKSLLNVF
Sbjct: 268 LTAKGRKRFEVYVCTMAERDYALEMWRLLDPGAHLIGSKQVFDRVICVKSGSRKSLLNVF 327

Query: 102 KDGNCHPKMAMVIDDRMKVWDDKDQPRVHVVPAF 1
            DG CHPKMAMVIDDR KVW+DKDQPRVHVVPAF
Sbjct: 328 HDGMCHPKMAMVIDDRSKVWEDKDQPRVHVVPAF 361


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