BLASTX nr result

ID: Cnidium21_contig00012610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012610
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333401.1| tir-nbs-lrr resistance protein [Populus tric...    80   1e-13
ref|XP_002331988.1| tir-nbs-lrr resistance protein [Populus tric...    79   3e-13
ref|XP_002273047.2| PREDICTED: TMV resistance protein N-like [Vi...    79   5e-13
emb|CAN76615.1| hypothetical protein VITISV_040107 [Vitis vinifera]    79   5e-13
ref|XP_002272667.2| PREDICTED: TMV resistance protein N-like [Vi...    78   9e-13

>ref|XP_002333401.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222836441|gb|EEE74848.1| tir-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1279

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/86 (47%), Positives = 61/86 (70%)
 Frame = -2

Query: 267  LINLDELHLSHCINLTSLPNSLWKLKVLRVLDLSWSSKLEQLPEQLGKMQCLEKLRASGT 88
            LI L  L +++C NL S+P+S+  LK L+ LDLS  S+L+ +PE LGK++ LE+   SGT
Sbjct: 752  LIGLGLLSMNNCKNLKSIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVSGT 811

Query: 87   SIEELPNSTGLLSRLQVLDVEWCKKV 10
            SI +LP S  LL +L+VL ++ CK++
Sbjct: 812  SIRQLPASVFLLKKLKVLSLDGCKRI 837


>ref|XP_002331988.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832112|gb|EEE70589.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1017

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/86 (47%), Positives = 59/86 (68%)
 Frame = -2

Query: 267 LINLDELHLSHCINLTSLPNSLWKLKVLRVLDLSWSSKLEQLPEQLGKMQCLEKLRASGT 88
           LI L  L +++C NL S+P+S+  LK L+ LDLS  S L+ +PE LGK++ LE+   SGT
Sbjct: 502 LIGLGLLSMTNCKNLESIPSSIGCLKSLKKLDLSCCSALKNIPENLGKVESLEEFDVSGT 561

Query: 87  SIEELPNSTGLLSRLQVLDVEWCKKV 10
           SI +LP S  LL  L+VL ++ CK++
Sbjct: 562 SIRQLPASVFLLKNLKVLSLDGCKRI 587



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/86 (37%), Positives = 52/86 (60%)
 Frame = -2

Query: 258 LDELHLSHCINLTSLPNSLWKLKVLRVLDLSWSSKLEQLPEQLGKMQCLEKLRASGTSIE 79
           L  ++L HC ++  LP++L +++ L+V  L   SKLE+ P+ +G M CL  LR  GT I 
Sbjct: 435 LQHVNLVHCQSIRILPSNL-EMESLKVFTLDGCSKLERFPDIVGNMNCLMVLRLDGTGIA 493

Query: 78  ELPNSTGLLSRLQVLDVEWCKKVKNL 1
           EL +S   L  L +L +  CK ++++
Sbjct: 494 ELSSSIRHLIGLGLLSMTNCKNLESI 519


>ref|XP_002273047.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1291

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/78 (50%), Positives = 56/78 (71%)
 Frame = -2

Query: 249  LHLSHCINLTSLPNSLWKLKVLRVLDLSWSSKLEQLPEQLGKMQCLEKLRASGTSIEELP 70
            L L +C  L SLP S+ KL  L+ L LS  S+L++LP+ +G +QCL KL+A+G+ I+E+P
Sbjct: 841  LKLKNCKRLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLLKLKANGSGIQEVP 900

Query: 69   NSTGLLSRLQVLDVEWCK 16
            +S  LL+RLQVL +  CK
Sbjct: 901  SSITLLTRLQVLSLAGCK 918



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 34/83 (40%), Positives = 52/83 (62%)
 Frame = -2

Query: 249 LHLSHCINLTSLPNSLWKLKVLRVLDLSWSSKLEQLPEQLGKMQCLEKLRASGTSIEELP 70
           L+L  C NL S  +S+  L+ L++L LS  SKL++LPE  G M  L +L   GT+I+ LP
Sbjct: 700 LNLEGCKNLKSFLSSI-HLESLQILTLSGCSKLKKLPEVQGAMDNLSELSLKGTAIKGLP 758

Query: 69  NSTGLLSRLQVLDVEWCKKVKNL 1
            S   L+ L + ++E CK +++L
Sbjct: 759 LSIEYLNGLALFNLEECKSLESL 781



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/82 (37%), Positives = 51/82 (62%)
 Frame = -2

Query: 246  HLSHCINLTSLPNSLWKLKVLRVLDLSWSSKLEQLPEQLGKMQCLEKLRASGTSIEELPN 67
            +L  C +L SLP  ++KLK L+ L LS   +L++LPE    M+ L++L    T + ELP+
Sbjct: 771  NLEECKSLESLPGCIFKLKSLKTLILSNCLRLKKLPEIQENMESLKELFLDDTGLRELPS 830

Query: 66   STGLLSRLQVLDVEWCKKVKNL 1
            S   L+ L +L ++ CK++ +L
Sbjct: 831  SIEHLNGLVLLKLKNCKRLASL 852


>emb|CAN76615.1| hypothetical protein VITISV_040107 [Vitis vinifera]
          Length = 1414

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/78 (50%), Positives = 56/78 (71%)
 Frame = -2

Query: 249  LHLSHCINLTSLPNSLWKLKVLRVLDLSWSSKLEQLPEQLGKMQCLEKLRASGTSIEELP 70
            L L +C  L SLP S+ KL  L+ L LS  S+L++LP+ +G +QCL KL+A+G+ I+E+P
Sbjct: 814  LKLKNCKRLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLLKLKANGSGIQEVP 873

Query: 69   NSTGLLSRLQVLDVEWCK 16
            +S  LL+RLQVL +  CK
Sbjct: 874  SSITLLTRLQVLSLAGCK 891


>ref|XP_002272667.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1261

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/78 (48%), Positives = 55/78 (70%)
 Frame = -2

Query: 249  LHLSHCINLTSLPNSLWKLKVLRVLDLSWSSKLEQLPEQLGKMQCLEKLRASGTSIEELP 70
            L L +C  L SLP S+ KL  L+ L LS  S+L++LP+ +G +QCL KL+A+GT I+E+P
Sbjct: 841  LKLKNCKKLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLVKLKANGTGIQEVP 900

Query: 69   NSTGLLSRLQVLDVEWCK 16
             S  LL++L+VL +  CK
Sbjct: 901  TSITLLTKLEVLSLAGCK 918



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/89 (41%), Positives = 55/89 (61%)
 Frame = -2

Query: 267  LINLDELHLSHCINLTSLPNSLWKLKVLRVLDLSWSSKLEQLPEQLGKMQCLEKLRASGT 88
            L  L  L+L  C +L SLP  ++KLK L+ L LS  S+L++LPE    M+ L+KL    T
Sbjct: 764  LNGLSLLNLEECKSLESLPGCIFKLKSLKTLILSNCSRLKKLPEIQENMESLKKLFLDDT 823

Query: 87   SIEELPNSTGLLSRLQVLDVEWCKKVKNL 1
             + ELP+S   L+ L +L ++ CKK+ +L
Sbjct: 824  GLRELPSSIEHLNGLVLLKLKNCKKLASL 852


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