BLASTX nr result

ID: Cnidium21_contig00012590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012590
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW88754.1| hypothetical protein ZEAMMB73_978741 [Zea mays]         94   3e-17
gb|ABV53463.1| pseudo-response regulator 7 [Castanea sativa]           93   7e-17
gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa ...    92   1e-16
dbj|BAE72697.1| pseudo-response regulator 37 homologue [Lemna pa...    92   1e-16
dbj|BAE72700.1| pseudo-response regulator 37 homologue [Lemna gi...    92   1e-16

>gb|AFW88754.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
          Length = 743

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 40/47 (85%), Positives = 46/47 (97%)
 Frame = -3

Query: 844 MSSNDSMGIVFKCLSKGAVDFLVKPIRKNELKHLWQHVWRKCHTVSC 704
           MS+NDSM +VFKCLSKGAVDFLVKP+RKNELK+LWQHVWR+CH+VSC
Sbjct: 164 MSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVWRRCHSVSC 210



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 51/141 (36%), Positives = 74/141 (52%), Gaps = 13/141 (9%)
 Frame = -2

Query: 416 SGSESGVMIQKPSS-------GLGNIGHAGNKNGGSAEDDNWNTDLNVNNGSD----TQI 270
           SGSESG+  QK +          G+  +  ++     +DD+++  LN  +GSD    TQ 
Sbjct: 215 SGSESGIQTQKCAKLNTGDEYENGSDSNHDDEENDDGDDDDFSVGLNARDGSDNGSGTQS 274

Query: 269 SWWKRVVEVDSQPPILGYEQLGDRPHTTCAHVDAYSRSEPHTNNCVPGTATWETYEEGDE 90
           SW KR VE+DS  PI   +QL D P +TCA V  + RSE  +N  +P TA     ++  E
Sbjct: 275 SWTKRAVEIDSPQPI-SPDQLVDPPDSTCAQV-IHPRSEICSNKWLP-TANKRNVKKQKE 331

Query: 89  L--VAMGKYLEIGIPTDQDLQ 33
               +MG+YL IG P +   +
Sbjct: 332 NKDESMGRYLGIGAPRNSSAE 352


>gb|ABV53463.1| pseudo-response regulator 7 [Castanea sativa]
          Length = 784

 Score = 93.2 bits (230), Expect = 7e-17
 Identities = 63/139 (45%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
 Frame = -2

Query: 416 SGSESGVMIQKPSSGLGNIGHAGNKNGGSAEDDNWNTDLNVNNGSD----TQISWWKRVV 249
           SGSES V I+  +S     G   N  G + EDDN +  LN+ +GSD    TQ SW KR V
Sbjct: 228 SGSESAVHIR--TSTKLKSGDEYNNTGSNDEDDNRSIGLNLRDGSDDGSGTQSSWTKRAV 285

Query: 248 EVDSQPPILGYEQLGDRPHTTCAHVDAYSRSEPHTNNCVPGTATWETYEEGDELVAMGKY 69
           EVDS  PI  +EQL D P +TCA V  +SR E   NN VP     E +++  + V MGK 
Sbjct: 286 EVDSPQPISPWEQLADAPDSTCARV-FHSRPEAFGNNWVP--VEHEEHDDEFDNVVMGKD 342

Query: 68  LEIGIPTDQDLQAEEPNRK 12
           L+IG P   +LQ E+P+ K
Sbjct: 343 LKIGEPRIPNLQLEDPSAK 361



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 40/46 (86%), Positives = 42/46 (91%)
 Frame = -3

Query: 844 MSSNDSMGIVFKCLSKGAVDFLVKPIRKNELKHLWQHVWRKCHTVS 707
           MSS DSM IVFKCLSKGAVDFL KPIRKNELK+LWQHVWRKCH+ S
Sbjct: 179 MSSYDSMNIVFKCLSKGAVDFLAKPIRKNELKNLWQHVWRKCHSCS 224


>gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
          Length = 789

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 41/46 (89%), Positives = 44/46 (95%)
 Frame = -3

Query: 844 MSSNDSMGIVFKCLSKGAVDFLVKPIRKNELKHLWQHVWRKCHTVS 707
           MSSNDSMG VFKCLSKGAVDFLVKPIRKNELK+LWQHVWR+CH+ S
Sbjct: 162 MSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSS 207



 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 37/178 (20%)
 Frame = -2

Query: 431 HQSGFSGSESGVMIQK---PSSGLGNIGHAGNKNGGSAEDDNWNTD------LNVNNGSD 279
           H S  SGSESG+  QK   P        ++G+ N    +DDN   D       N  +GSD
Sbjct: 204 HSSSGSGSESGIRTQKCTKPKVDDEYENNSGSNNDNEDDDDNDEDDDDLSVGHNARDGSD 263

Query: 278 --------------------------TQISWWKRVVEVDSQPPILGYEQLGDRPHTTCAH 177
                                     TQ SW KR VE+DS P  +  +Q  D P +TCA 
Sbjct: 264 NGSGTQFSLNVGQLCQCILMPSACFKTQSSWTKRAVEIDS-PQQMSPDQPSDLPDSTCAQ 322

Query: 176 VDAYSRSEPHTNNCVP--GTATWETYEEGDELVAMGKYLEIGIPTDQDLQAEEPNRKM 9
           V  +  SE  +N  +P     + + ++E ++  +MGKYLEIG P +  ++ +   R+M
Sbjct: 323 V-IHPTSEICSNRWLPTANKRSGKKHKENND-DSMGKYLEIGAPRNSSMEYQSSPREM 378


>dbj|BAE72697.1| pseudo-response regulator 37 homologue [Lemna paucicostata]
          Length = 617

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 41/46 (89%), Positives = 45/46 (97%)
 Frame = -3

Query: 844 MSSNDSMGIVFKCLSKGAVDFLVKPIRKNELKHLWQHVWRKCHTVS 707
           MSS+DSMGIVFKCLSKGAVDFLVKPIRKNELK+LWQHVWR+CH+ S
Sbjct: 158 MSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSS 203


>dbj|BAE72700.1| pseudo-response regulator 37 homologue [Lemna gibba]
          Length = 623

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 41/46 (89%), Positives = 45/46 (97%)
 Frame = -3

Query: 844 MSSNDSMGIVFKCLSKGAVDFLVKPIRKNELKHLWQHVWRKCHTVS 707
           MSS+DSMGIVFKCLSKGAVDFLVKPIRKNELK+LWQHVWR+CH+ S
Sbjct: 158 MSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSS 203


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