BLASTX nr result

ID: Cnidium21_contig00012574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012574
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   392   e-107
ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2...   391   e-107
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   372   e-101
ref|XP_004166155.1| PREDICTED: DNA polymerase alpha catalytic su...   370   e-100
ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic su...   370   e-100

>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
            gi|223537171|gb|EEF38804.1| DNA polymerase alpha
            catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  392 bits (1008), Expect = e-107
 Identities = 196/237 (82%), Positives = 211/237 (89%), Gaps = 1/237 (0%)
 Frame = -1

Query: 709  KTLQGARAQRVEYLLLHAFHAKKFIVPDKLSFQMK-DTKVPKRKAKNGVEENGLPNIDPA 533
            KTLQGARAQRVEYLLLHAFHAKK+IVPDK SF +K +TK+ KR+  NGVEE     +D  
Sbjct: 816  KTLQGARAQRVEYLLLHAFHAKKYIVPDKNSFHLKKETKMTKRRIHNGVEEKNAEELDTD 875

Query: 532  DTNMDTESPQNDNGKSKKGPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFT 353
              N D +SP+ND GK KKGP+Y GGLVLEPKKGLYDKY+LLLDFNSLYPSIIQEYNICFT
Sbjct: 876  HANFDNDSPENDRGKGKKGPAYVGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFT 935

Query: 352  TVERPEDGSIPRLPSSRRTGVLPELLKNLVERRRMVKSWLKTATGLKVQQLDIQQQALKL 173
            TVE+  DG +PRLPS + TGVLPELLKNLVERRRMVKSW+K A+GLKVQQLDIQQQALKL
Sbjct: 936  TVEKSTDGLVPRLPSIKTTGVLPELLKNLVERRRMVKSWMKNASGLKVQQLDIQQQALKL 995

Query: 172  TANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIM 2
            TANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIM
Sbjct: 996  TANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIM 1052


>ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1|
            predicted protein [Populus trichocarpa]
          Length = 1312

 Score =  391 bits (1005), Expect = e-107
 Identities = 192/236 (81%), Positives = 213/236 (90%)
 Frame = -1

Query: 709  KTLQGARAQRVEYLLLHAFHAKKFIVPDKLSFQMKDTKVPKRKAKNGVEENGLPNIDPAD 530
            KTLQGARAQRVEYLLLHAFHAKK+IVPDK+S ++K+ K+ KR+  NG+E+     +D   
Sbjct: 602  KTLQGARAQRVEYLLLHAFHAKKYIVPDKMSSRVKEAKITKRRINNGIEDRNADELDTDA 661

Query: 529  TNMDTESPQNDNGKSKKGPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTT 350
             N + ++ Q+D+GK KKGP+YAGGLVLEPKKGLYDKY+LLLDFNSLYPSIIQEYNICFTT
Sbjct: 662  ANFENDNQQSDHGKRKKGPAYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTT 721

Query: 349  VERPEDGSIPRLPSSRRTGVLPELLKNLVERRRMVKSWLKTATGLKVQQLDIQQQALKLT 170
            VER  DG +PRLPSS+ TGVLPELLKNLVERRRMVKSW+K A+GLKVQQLDIQQQALKLT
Sbjct: 722  VERSMDGLVPRLPSSKTTGVLPELLKNLVERRRMVKSWMKNASGLKVQQLDIQQQALKLT 781

Query: 169  ANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIM 2
            ANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIM
Sbjct: 782  ANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIM 837


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
            vinifera]
          Length = 1522

 Score =  372 bits (956), Expect = e-101
 Identities = 187/237 (78%), Positives = 210/237 (88%), Gaps = 1/237 (0%)
 Frame = -1

Query: 709  KTLQGARAQRVEYLLLHAFHAKKFIVPDKLSFQMKDTKVPKRKA-KNGVEENGLPNIDPA 533
            KTLQGARAQRVEYLLLH FHAKK+IVPDK+S  +++TK  KR+  + G E+  +  +D  
Sbjct: 816  KTLQGARAQRVEYLLLHEFHAKKYIVPDKISSHLRETKWTKRRMNQGGAEDRNIDELDVD 875

Query: 532  DTNMDTESPQNDNGKSKKGPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFT 353
            D +++ ++  N+ GK KKGP+Y+GGLVLEPK+GLYDKYILLLDFNSLYPSIIQEYNICFT
Sbjct: 876  DAHVENDAHHNNQGKGKKGPAYSGGLVLEPKRGLYDKYILLLDFNSLYPSIIQEYNICFT 935

Query: 352  TVERPEDGSIPRLPSSRRTGVLPELLKNLVERRRMVKSWLKTATGLKVQQLDIQQQALKL 173
            TVER  DGS+PRLPSS+ TGVLPELLK LVERR+ VKS LKTA+GLKVQQLDIQQQALKL
Sbjct: 936  TVERSPDGSVPRLPSSKTTGVLPELLKKLVERRKTVKSRLKTASGLKVQQLDIQQQALKL 995

Query: 172  TANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIM 2
            TANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIM
Sbjct: 996  TANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIM 1052


>ref|XP_004166155.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
            [Cucumis sativus]
          Length = 1027

 Score =  370 bits (950), Expect = e-100
 Identities = 187/236 (79%), Positives = 207/236 (87%)
 Frame = -1

Query: 709  KTLQGARAQRVEYLLLHAFHAKKFIVPDKLSFQMKDTKVPKRKAKNGVEENGLPNIDPAD 530
            ++LQGARAQRVEYLLLHAFHAKK+IVPDK S  +KD K+ K++  +G EE  +   D  D
Sbjct: 321  RSLQGARAQRVEYLLLHAFHAKKYIVPDKNSSYVKDKKIVKKRTNHGSEEKNVDQFDLDD 380

Query: 529  TNMDTESPQNDNGKSKKGPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTT 350
             N+  E+P  D+GK KKGPSY GGLVLEPK+GLYDKY+LLLDFNSLYPSIIQEYNICFTT
Sbjct: 381  GNV--EAPNTDSGKGKKGPSYLGGLVLEPKRGLYDKYVLLLDFNSLYPSIIQEYNICFTT 438

Query: 349  VERPEDGSIPRLPSSRRTGVLPELLKNLVERRRMVKSWLKTATGLKVQQLDIQQQALKLT 170
            VER  DG IP LPSSR TGVLPELLKNLV+RRRMVKSW+K A+GLK+QQLDIQQQALKLT
Sbjct: 439  VERSPDGVIPPLPSSRVTGVLPELLKNLVQRRRMVKSWMKNASGLKLQQLDIQQQALKLT 498

Query: 169  ANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIM 2
            ANSMYGCLGFSNSRFYAKPLAELIT QGREILQSTVDLV+NNL+LEVIYGDTDSIM
Sbjct: 499  ANSMYGCLGFSNSRFYAKPLAELITSQGREILQSTVDLVKNNLSLEVIYGDTDSIM 554


>ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Cucumis
            sativus]
          Length = 1547

 Score =  370 bits (950), Expect = e-100
 Identities = 187/236 (79%), Positives = 207/236 (87%)
 Frame = -1

Query: 709  KTLQGARAQRVEYLLLHAFHAKKFIVPDKLSFQMKDTKVPKRKAKNGVEENGLPNIDPAD 530
            ++LQGARAQRVEYLLLHAFHAKK+IVPDK S  +KD K+ K++  +G EE  +   D  D
Sbjct: 841  RSLQGARAQRVEYLLLHAFHAKKYIVPDKNSSYVKDKKIVKKRTNHGSEEKNVDQFDLDD 900

Query: 529  TNMDTESPQNDNGKSKKGPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTT 350
             N+  E+P  D+GK KKGPSY GGLVLEPK+GLYDKY+LLLDFNSLYPSIIQEYNICFTT
Sbjct: 901  GNV--EAPNTDSGKGKKGPSYLGGLVLEPKRGLYDKYVLLLDFNSLYPSIIQEYNICFTT 958

Query: 349  VERPEDGSIPRLPSSRRTGVLPELLKNLVERRRMVKSWLKTATGLKVQQLDIQQQALKLT 170
            VER  DG IP LPSSR TGVLPELLKNLV+RRRMVKSW+K A+GLK+QQLDIQQQALKLT
Sbjct: 959  VERSPDGVIPPLPSSRVTGVLPELLKNLVQRRRMVKSWMKNASGLKLQQLDIQQQALKLT 1018

Query: 169  ANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIM 2
            ANSMYGCLGFSNSRFYAKPLAELIT QGREILQSTVDLV+NNL+LEVIYGDTDSIM
Sbjct: 1019 ANSMYGCLGFSNSRFYAKPLAELITSQGREILQSTVDLVKNNLSLEVIYGDTDSIM 1074


Top