BLASTX nr result

ID: Cnidium21_contig00012547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012547
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB39510.1| AP-1 Golgi-related complex component; clathrin co...    87   2e-15
gb|AEQ94155.1| clathrin adaptor complex family protein [Elaeis g...    86   2e-15
ref|XP_002318532.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
gb|ABK93212.1| unknown [Populus trichocarpa]                           84   1e-14
ref|XP_004144562.1| PREDICTED: AP-1 complex subunit sigma-1-like...    84   2e-14

>gb|AAB39510.1| AP-1 Golgi-related complex component; clathrin coated vesicles;
           clathrin assembly protein [Camptotheca acuminata]
          Length = 161

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/53 (84%), Positives = 50/53 (94%)
 Frame = +2

Query: 2   KAYYILDEILIAGELQESSKKTVERLIDAQDALVEAAKEQANSVSYMISQATK 160
           KAYYILDE+LIAGELQESSKKTV RLI AQD+LVEAAKEQA+S+S MI+QATK
Sbjct: 109 KAYYILDELLIAGELQESSKKTVARLIAAQDSLVEAAKEQASSISNMIAQATK 161


>gb|AEQ94155.1| clathrin adaptor complex family protein [Elaeis guineensis]
          Length = 161

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/53 (84%), Positives = 49/53 (92%)
 Frame = +2

Query: 2   KAYYILDEILIAGELQESSKKTVERLIDAQDALVEAAKEQANSVSYMISQATK 160
           KAYYILDEILIAGELQESSKKTV RLI AQD+LVE A+EQANS+S MI+QATK
Sbjct: 109 KAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAQEQANSISNMIAQATK 161


>ref|XP_002318532.1| predicted protein [Populus trichocarpa] gi|222859205|gb|EEE96752.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/53 (81%), Positives = 49/53 (92%)
 Frame = +2

Query: 2   KAYYILDEILIAGELQESSKKTVERLIDAQDALVEAAKEQANSVSYMISQATK 160
           KAYY+LDEILIAGELQESSKKTV RLI AQD+LVE AKEQA+S+S +I+QATK
Sbjct: 109 KAYYVLDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161


>gb|ABK93212.1| unknown [Populus trichocarpa]
          Length = 160

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/53 (81%), Positives = 49/53 (92%)
 Frame = +2

Query: 2   KAYYILDEILIAGELQESSKKTVERLIDAQDALVEAAKEQANSVSYMISQATK 160
           KAYY+LDEILIAGELQESSKKTV RLI AQD+LVE AKEQA+S+S +I+QATK
Sbjct: 108 KAYYVLDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 160


>ref|XP_004144562.1| PREDICTED: AP-1 complex subunit sigma-1-like [Cucumis sativus]
           gi|449500122|ref|XP_004161010.1| PREDICTED: AP-1 complex
           subunit sigma-1-like [Cucumis sativus]
          Length = 161

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/53 (81%), Positives = 49/53 (92%)
 Frame = +2

Query: 2   KAYYILDEILIAGELQESSKKTVERLIDAQDALVEAAKEQANSVSYMISQATK 160
           KAYYILDE+LIAGELQESSKKTV RLI AQD+LVE AKEQA+S+S +I+QATK
Sbjct: 109 KAYYILDELLIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161


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