BLASTX nr result

ID: Cnidium21_contig00012539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012539
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281306.1| PREDICTED: peroxisome biogenesis protein 3-2...   217   3e-54
ref|XP_003525200.1| PREDICTED: peroxisome biogenesis protein 3-2...   198   1e-48
ref|XP_003530946.1| PREDICTED: peroxisome biogenesis protein 3-2...   197   2e-48
gb|ACU20085.1| unknown [Glycine max]                                  196   6e-48
ref|XP_002529562.1| amino acid transporter, putative [Ricinus co...   191   2e-46

>ref|XP_002281306.1| PREDICTED: peroxisome biogenesis protein 3-2 [Vitis vinifera]
           gi|297734292|emb|CBI15539.3| unnamed protein product
           [Vitis vinifera]
          Length = 373

 Score =  217 bits (552), Expect = 3e-54
 Identities = 117/193 (60%), Positives = 146/193 (75%), Gaps = 5/193 (2%)
 Frame = +1

Query: 1   DQQQFLAGVDFLSNYGMSMLISNMQTAATEVLKEKQLKDLFTTSVLHDTIMQILDVFMSM 180
           DQQ+FLA  DFLSNY +  LISNM  AA EVLK KQL+D+F + VLH TIMQILD+F+S 
Sbjct: 179 DQQKFLASADFLSNYSIPALISNMHAAAAEVLKGKQLRDVFNSMVLHGTIMQILDLFIST 238

Query: 181 GSPHQWVNYLMPEDLK-YKSAAFSSNDSQN--ERTKFDLLMLEAHAVLSSDEFRSILDVS 351
           G PH  V+YLMP+D K YK A+ S+ DS    + TKFD LM+E  AVLSS EF +++DVS
Sbjct: 239 GKPHNLVDYLMPDDTKSYKPASPSNGDSSTPADVTKFDQLMVETRAVLSSAEFINVIDVS 298

Query: 352 LRSVVDDLLQDMKDQH--GGINSSGVPLARLVPKVAQMGPLLLEEPSKNKYIQIVRNLPV 525
           LR+VVD +++DM      GG  SSG+ LA+L+P+VAQMGPLLLEEPSKN++IQI++  P 
Sbjct: 299 LRTVVDAVVEDMMGVQLGGGSPSSGMVLAKLLPRVAQMGPLLLEEPSKNRFIQIIQKAPE 358

Query: 526 AEVFFTLLYADTP 564
            E FFTLLYA+ P
Sbjct: 359 VEFFFTLLYANMP 371


>ref|XP_003525200.1| PREDICTED: peroxisome biogenesis protein 3-2-like [Glycine max]
          Length = 369

 Score =  198 bits (503), Expect = 1e-48
 Identities = 101/190 (53%), Positives = 145/190 (76%), Gaps = 2/190 (1%)
 Frame = +1

Query: 1   DQQQFLAGVDFLSNYGMSMLISNMQTAATEVLKEKQLKDLFTTSVLHDTIMQILDVFMSM 180
           DQ++FL  VDFLS +GM  LIS+M+ A  EVLK KQL   F ++ LH+TIMQIL+ FMSM
Sbjct: 178 DQKKFLDSVDFLSQHGMPALISDMEAATKEVLKGKQLSTFFNSTTLHETIMQILNTFMSM 237

Query: 181 GSPHQWVNYLMPEDLK-YKSAAFSSNDSQNERTKFDLLMLEAHAVLSSDEFRSILDVSLR 357
           G+P+ W+ Y++PED++ Y + + S +    + T+F+ LM+EA AVLSS EF SI+++SL+
Sbjct: 238 GTPNSWIKYMIPEDVRPYSTTSGSDDPVPFDVTEFEQLMIEARAVLSSAEFGSIVEISLK 297

Query: 358 SVVDDLLQDMKDQ-HGGINSSGVPLARLVPKVAQMGPLLLEEPSKNKYIQIVRNLPVAEV 534
           +VVD L++ M+ +  GG  + G+PLAR++P+VAQM PLLL EPSKN++IQI++N+   E+
Sbjct: 298 AVVDTLVELMRTKFSGGSVAEGMPLARVLPQVAQMCPLLLGEPSKNQFIQIIKNIQEVEL 357

Query: 535 FFTLLYADTP 564
           FFTLLYA+ P
Sbjct: 358 FFTLLYANMP 367


>ref|XP_003530946.1| PREDICTED: peroxisome biogenesis protein 3-2-like [Glycine max]
          Length = 369

 Score =  197 bits (502), Expect = 2e-48
 Identities = 101/190 (53%), Positives = 144/190 (75%), Gaps = 2/190 (1%)
 Frame = +1

Query: 1   DQQQFLAGVDFLSNYGMSMLISNMQTAATEVLKEKQLKDLFTTSVLHDTIMQILDVFMSM 180
           DQ++FL  +DFLS +GM  LIS+M+ A  EVLK KQL   F ++ LH+TIMQIL+ FMSM
Sbjct: 178 DQKKFLDNIDFLSQHGMPALISDMEAATKEVLKGKQLSTFFNSTTLHETIMQILNSFMSM 237

Query: 181 GSPHQWVNYLMPEDLKYKSAAFSSNDS-QNERTKFDLLMLEAHAVLSSDEFRSILDVSLR 357
           G+P+ W+ Y++PED++  S  + S+D    + T+F+ LM+EA AVLSS EF SI+++SL+
Sbjct: 238 GTPNSWIKYMIPEDVRPYSTTYGSDDPVPFDMTEFEQLMMEAWAVLSSAEFGSIVEISLK 297

Query: 358 SVVDDLLQDMKDQ-HGGINSSGVPLARLVPKVAQMGPLLLEEPSKNKYIQIVRNLPVAEV 534
           +VVD L++ M  +  GG  + G+PLAR++P+VAQM PLLLEEP KN++IQI++N+   E+
Sbjct: 298 AVVDTLVELMGTKFSGGSVAGGLPLARVLPQVAQMCPLLLEEPRKNQFIQIIKNIQEVEL 357

Query: 535 FFTLLYADTP 564
           FFTLLYA+ P
Sbjct: 358 FFTLLYANMP 367


>gb|ACU20085.1| unknown [Glycine max]
          Length = 369

 Score =  196 bits (498), Expect = 6e-48
 Identities = 101/190 (53%), Positives = 143/190 (75%), Gaps = 2/190 (1%)
 Frame = +1

Query: 1   DQQQFLAGVDFLSNYGMSMLISNMQTAATEVLKEKQLKDLFTTSVLHDTIMQILDVFMSM 180
           DQ++FL  +DFLS +GM  LIS+M+ A  EVLK KQL   F ++ LH+TIMQIL+ FMSM
Sbjct: 178 DQKKFLDNIDFLSQHGMPALISDMEAATKEVLKGKQLSTFFNSTTLHETIMQILNSFMSM 237

Query: 181 GSPHQWVNYLMPEDLKYKSAAFSSNDS-QNERTKFDLLMLEAHAVLSSDEFRSILDVSLR 357
           G+P+ W+ Y++PED++  S    S+D    + T+F+ LM+EA AVLSS EF SI+++SL+
Sbjct: 238 GTPNSWIKYMIPEDVRPYSTTHGSDDPVPFDMTEFEQLMMEAWAVLSSAEFGSIVEISLK 297

Query: 358 SVVDDLLQDMKDQ-HGGINSSGVPLARLVPKVAQMGPLLLEEPSKNKYIQIVRNLPVAEV 534
           +VVD L++ M  +  GG  + G+PLAR++P+VAQM PLLLEEP KN++IQI++N+   E+
Sbjct: 298 AVVDTLVELMGTKFSGGSVAGGLPLARVLPQVAQMCPLLLEEPRKNQFIQIIKNIQEVEL 357

Query: 535 FFTLLYADTP 564
           FFTLLYA+ P
Sbjct: 358 FFTLLYANMP 367


>ref|XP_002529562.1| amino acid transporter, putative [Ricinus communis]
           gi|223530974|gb|EEF32831.1| amino acid transporter,
           putative [Ricinus communis]
          Length = 373

 Score =  191 bits (485), Expect = 2e-46
 Identities = 103/189 (54%), Positives = 135/189 (71%), Gaps = 4/189 (2%)
 Frame = +1

Query: 4   QQQFLAGVDFLSNYGMSMLISNMQTAATEVLKEKQLKDLFTTSVLHDTIMQILDVFMSMG 183
           QQ+FLA  DF +N G+  L S++Q AA EVLK KQL+D F T+ LH+TIMQILD+ MS G
Sbjct: 180 QQKFLASSDFFANSGILALSSDVQLAAAEVLKGKQLRDFFNTATLHETIMQILDLLMSRG 239

Query: 184 SPHQWVNYLMPEDLKY-KSAAFSSNDS--QNERTKFDLLMLEAHAVLSSDEFRSILDVSL 354
           SPH WV YLMP D ++ K    SS+D     + TKF+ LM EA AV+SS EF  +++ SL
Sbjct: 240 SPHHWVEYLMPADARFDKRPIDSSSDDIIMTDGTKFEQLMAEARAVISSAEFLGVVEKSL 299

Query: 355 RSVVDDLLQDM-KDQHGGINSSGVPLARLVPKVAQMGPLLLEEPSKNKYIQIVRNLPVAE 531
              VD L+ DM  +  GG   +G+PLARLVP+VAQMGPLLLEEPS+N+++QI+ ++P  E
Sbjct: 300 EVSVDALVADMGAESSGGSLMAGMPLARLVPRVAQMGPLLLEEPSRNRFLQIIWSIPQVE 359

Query: 532 VFFTLLYAD 558
            FF+ LYA+
Sbjct: 360 GFFSALYAN 368


Top