BLASTX nr result

ID: Cnidium21_contig00012538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012538
         (1172 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274343.1| PREDICTED: tubulin-specific chaperone B isof...   404   e-110
ref|XP_002274425.1| PREDICTED: tubulin-specific chaperone B isof...   400   e-109
ref|XP_004142648.1| PREDICTED: tubulin-specific chaperone B-like...   379   e-103
gb|AFK42330.1| unknown [Lotus japonicus]                              378   e-102
ref|XP_002307984.1| tubulin folding cofactor [Populus trichocarp...   377   e-102

>ref|XP_002274343.1| PREDICTED: tubulin-specific chaperone B isoform 1 [Vitis vinifera]
           gi|359482231|ref|XP_003632738.1| PREDICTED:
           tubulin-specific chaperone B [Vitis vinifera]
           gi|297739921|emb|CBI30103.3| unnamed protein product
           [Vitis vinifera]
          Length = 242

 Score =  404 bits (1039), Expect = e-110
 Identities = 188/242 (77%), Positives = 221/242 (91%), Gaps = 1/242 (0%)
 Frame = +2

Query: 122 MAS-LQVQGDESVLLLISHSNMKSFAPEVSFSLQMTVEAVKEKLWKKCGTSVDSMCLELY 298
           MAS LQ+Q DESV L ++H N+KSF+ +V FSLQMTVE+VK+KLW+KCGTSV+SMCLELY
Sbjct: 1   MASRLQIQEDESVSLRVTHGNIKSFSADVRFSLQMTVESVKDKLWRKCGTSVNSMCLELY 60

Query: 299 DHSGTKISNLSDNMRPLGFYSPQDGHRLHIIDLDPSSVTSGGWLDDTSQVEKYTISEEAF 478
           D +G KIS LSDN+RPLGFYSPQDG+RLH+IDLDPSSVTSGGWL+DTS VEKY+ISEEA+
Sbjct: 61  DDTGAKISVLSDNLRPLGFYSPQDGYRLHVIDLDPSSVTSGGWLEDTSLVEKYSISEEAY 120

Query: 479 DKLDGTYRKYKEKFAHQKPTNQVSKMSENYMEDLCTNIKIGDRCQVEPGEKRGVITFVGR 658
           +KLDGT+RK+KEK A Q P+   SK+S++YM DLC NIK+GDRC+VEPGEKRGV+ FVGR
Sbjct: 121 EKLDGTFRKFKEKLAFQNPSILESKISDHYMGDLCANIKVGDRCEVEPGEKRGVVKFVGR 180

Query: 659 AEALGPGFWVGIQYDEPLGKHDGMVKGTRYFDCPPLHGAMMRPDKVKVGDYPERDLFDEE 838
           A++L PGFWVG+QYDEPLGKHDGMVKGTRYFDCPPLHGAM+RPDKVKVGDYPERDLF+E+
Sbjct: 181 AQSLAPGFWVGVQYDEPLGKHDGMVKGTRYFDCPPLHGAMVRPDKVKVGDYPERDLFEED 240

Query: 839 EI 844
           EI
Sbjct: 241 EI 242


>ref|XP_002274425.1| PREDICTED: tubulin-specific chaperone B isoform 2 [Vitis vinifera]
          Length = 243

 Score =  400 bits (1027), Expect = e-109
 Identities = 186/243 (76%), Positives = 222/243 (91%), Gaps = 2/243 (0%)
 Frame = +2

Query: 122 MAS-LQVQGDESVLLLISHSNMKSFAPEVSFSLQMTVEAVKEKLWKKCGTSVDSMCLELY 298
           MAS LQ+Q DESV L ++H N+KSF+ +V FSLQMTVE+VK+KLW+KCGTSV+SMCLELY
Sbjct: 1   MASRLQIQEDESVSLRVTHGNIKSFSADVRFSLQMTVESVKDKLWRKCGTSVNSMCLELY 60

Query: 299 DHSGTKISNLSDNMRPLGFYSPQDGHRLHIIDLDPSSVTSGGWLDDTSQVEKYTISEEAF 478
           D +G KIS LSDN+RPLGFYSPQDG+RLH+IDLDPSSVTSGGWL+DTS VEKY+ISEEA+
Sbjct: 61  DDTGAKISVLSDNLRPLGFYSPQDGYRLHVIDLDPSSVTSGGWLEDTSLVEKYSISEEAY 120

Query: 479 DKLDGTYRKYKEKFAHQKPTNQVS-KMSENYMEDLCTNIKIGDRCQVEPGEKRGVITFVG 655
           +KLDGT+RK+KEK A Q P++ +  ++S++YM DLC NIK+GDRC+VEPGEKRGV+ FVG
Sbjct: 121 EKLDGTFRKFKEKLAFQNPSSDLCLQISDHYMGDLCANIKVGDRCEVEPGEKRGVVKFVG 180

Query: 656 RAEALGPGFWVGIQYDEPLGKHDGMVKGTRYFDCPPLHGAMMRPDKVKVGDYPERDLFDE 835
           RA++L PGFWVG+QYDEPLGKHDGMVKGTRYFDCPPLHGAM+RPDKVKVGDYPERDLF+E
Sbjct: 181 RAQSLAPGFWVGVQYDEPLGKHDGMVKGTRYFDCPPLHGAMVRPDKVKVGDYPERDLFEE 240

Query: 836 EEI 844
           +EI
Sbjct: 241 DEI 243


>ref|XP_004142648.1| PREDICTED: tubulin-specific chaperone B-like [Cucumis sativus]
          Length = 245

 Score =  379 bits (973), Expect = e-103
 Identities = 175/236 (74%), Positives = 208/236 (88%)
 Frame = +2

Query: 134 QVQGDESVLLLISHSNMKSFAPEVSFSLQMTVEAVKEKLWKKCGTSVDSMCLELYDHSGT 313
           Q++ DESVLL ++H+N+KSF  +V FSLQM+VE+VKEKLW+KCGTSV+SMCLELYD SG+
Sbjct: 7   QIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLELYDDSGS 66

Query: 314 KISNLSDNMRPLGFYSPQDGHRLHIIDLDPSSVTSGGWLDDTSQVEKYTISEEAFDKLDG 493
           KIS+L+DN  PLGFYSP DG+RLHIIDLDPSSVTSGGWL+DTS VEK+ ISEEA+DK D 
Sbjct: 67  KISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEAYDKRDD 126

Query: 494 TYRKYKEKFAHQKPTNQVSKMSENYMEDLCTNIKIGDRCQVEPGEKRGVITFVGRAEALG 673
           T+RK+KEK A Q P+   SK+S+NYME+LC NIK+GDRCQVEPGEKRGV+ FVGRAE+L 
Sbjct: 127 TFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVGRAESLA 186

Query: 674 PGFWVGIQYDEPLGKHDGMVKGTRYFDCPPLHGAMMRPDKVKVGDYPERDLFDEEE 841
           PGFWVG+QYDEPLGK+DG VKG  YFDC P HGAM+RPDKVKVG+YPERD FD+E+
Sbjct: 187 PGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDDED 242


>gb|AFK42330.1| unknown [Lotus japonicus]
          Length = 243

 Score =  378 bits (970), Expect = e-102
 Identities = 174/241 (72%), Positives = 210/241 (87%), Gaps = 1/241 (0%)
 Frame = +2

Query: 125 ASLQ-VQGDESVLLLISHSNMKSFAPEVSFSLQMTVEAVKEKLWKKCGTSVDSMCLELYD 301
           +SLQ + GDE+VLL ++HSN+K+F P++ FSLQ+TVEAVKEKLWKKCGTSV+SM LELYD
Sbjct: 3   SSLQKIDGDETVLLRVTHSNLKTFNPDIRFSLQLTVEAVKEKLWKKCGTSVNSMHLELYD 62

Query: 302 HSGTKISNLSDNMRPLGFYSPQDGHRLHIIDLDPSSVTSGGWLDDTSQVEKYTISEEAFD 481
            +  KI++L+DN +PLGFYSP DG RLH++DLDPSSVTSGGWL+DTS VEKY ISEEAF+
Sbjct: 63  DTHVKITDLTDNSKPLGFYSPLDGFRLHVVDLDPSSVTSGGWLEDTSLVEKYQISEEAFN 122

Query: 482 KLDGTYRKYKEKFAHQKPTNQVSKMSENYMEDLCTNIKIGDRCQVEPGEKRGVITFVGRA 661
           K +GT+RKYKEK   Q P+N  +K+ +NYMEDLC +IK+G RC+VEPG KRGV+TFVGRA
Sbjct: 123 KREGTFRKYKEKLTSQIPSNVEAKIPDNYMEDLCVDIKVGSRCEVEPGGKRGVVTFVGRA 182

Query: 662 EALGPGFWVGIQYDEPLGKHDGMVKGTRYFDCPPLHGAMMRPDKVKVGDYPERDLFDEEE 841
           E LGPGFWVG+QYDEPLGKHDGMVKG RYF+CPP HG ++RP KVKVGDYPERD F+E+E
Sbjct: 183 EPLGPGFWVGVQYDEPLGKHDGMVKGVRYFECPPFHGGIVRPGKVKVGDYPERDPFEEDE 242

Query: 842 I 844
           I
Sbjct: 243 I 243


>ref|XP_002307984.1| tubulin folding cofactor [Populus trichocarpa]
           gi|118483420|gb|ABK93610.1| unknown [Populus
           trichocarpa] gi|222853960|gb|EEE91507.1| tubulin folding
           cofactor [Populus trichocarpa]
          Length = 243

 Score =  377 bits (969), Expect = e-102
 Identities = 171/237 (72%), Positives = 210/237 (88%)
 Frame = +2

Query: 134 QVQGDESVLLLISHSNMKSFAPEVSFSLQMTVEAVKEKLWKKCGTSVDSMCLELYDHSGT 313
           Q+Q DE+VLL ++HSN+KSF+ E+ FSLQ +VEAVK+KLW+KCGTSV+SM LELYD + +
Sbjct: 7   QIQPDEAVLLRVTHSNIKSFSAEIRFSLQSSVEAVKDKLWRKCGTSVNSMQLELYDDANS 66

Query: 314 KISNLSDNMRPLGFYSPQDGHRLHIIDLDPSSVTSGGWLDDTSQVEKYTISEEAFDKLDG 493
           K+SNL+D+ RPLGFYSP DG+RLHIIDLDPSSVT+GGWL+D S VEKY+ISEEA+DK DG
Sbjct: 67  KVSNLTDDSRPLGFYSPFDGYRLHIIDLDPSSVTAGGWLEDISSVEKYSISEEAYDKRDG 126

Query: 494 TYRKYKEKFAHQKPTNQVSKMSENYMEDLCTNIKIGDRCQVEPGEKRGVITFVGRAEALG 673
           T+RK+KEK A Q P+    K++++YMEDLC NIK+GDRC+++PGEKRGV+ +VGRAE+L 
Sbjct: 127 TFRKFKEKMAAQNPSAFAPKITDDYMEDLCANIKVGDRCEIDPGEKRGVVKYVGRAESLA 186

Query: 674 PGFWVGIQYDEPLGKHDGMVKGTRYFDCPPLHGAMMRPDKVKVGDYPERDLFDEEEI 844
           PGFWVG+Q+DEP GKHDGMVKG RYFD PPLHGAM+RPDKVKVGDYPERD F+EEEI
Sbjct: 187 PGFWVGVQFDEPFGKHDGMVKGVRYFDSPPLHGAMIRPDKVKVGDYPERDPFEEEEI 243


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