BLASTX nr result
ID: Cnidium21_contig00012526
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00012526 (967 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002299342.1| predicted protein [Populus trichocarpa] gi|2... 363 3e-98 ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containi... 355 9e-96 ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containi... 351 1e-94 emb|CBI35666.3| unnamed protein product [Vitis vinifera] 348 1e-93 ref|NP_196831.1| pentatricopeptide repeat-containing protein [Ar... 317 2e-84 >ref|XP_002299342.1| predicted protein [Populus trichocarpa] gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa] Length = 684 Score = 363 bits (933), Expect = 3e-98 Identities = 167/241 (69%), Positives = 199/241 (82%) Frame = -2 Query: 963 YGVEPTVDHYDCMIDIYARAGLLKKAYELIKSMPFQPDAMSWKSLLGGCSVHRNFELGKI 784 YGV T+DHYDCM+DIY+RAG L++A ELI+SMPF PDAMSWK LLGGC +RN E+G++ Sbjct: 444 YGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGEL 503 Query: 783 AAEELLRVDPEDIAAYVLMFNLYVSSGKWNEAADVRRRMAERDLRKEVGCSWITIKGQVH 604 AAE L ++DPED A Y+LMFNLY S GKW EAA+VR+ MAER+LRKE+ CSWIT+KG+VH Sbjct: 504 AAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVH 563 Query: 603 RFIVGDKYHPQTEAIYSKLNELKFPRTKNEHVILSEDDAGNNLSERRDQLLDHSERLAIA 424 RFIVGDK+HPQTE IYSKL L K E +L+E+D N+L ER++QLL HSERLA+A Sbjct: 564 RFIVGDKHHPQTEEIYSKLEALNDSVIKEETGLLTEEDVSNSLPERKEQLLVHSERLALA 623 Query: 423 YGLISVPTDTAIVIFKNLRACKDCHDFAKHVSVITGREIVVRDSSRFHHFKSGECSCGDY 244 +GLIS P+ +V+FKNLRACKDCHDF K VS+ITGREIVVRDS RFHHFK GECSC DY Sbjct: 624 FGLISTPSSAPVVVFKNLRACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECSCNDY 683 Query: 243 W 241 W Sbjct: 684 W 684 >ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270, chloroplastic-like [Glycine max] Length = 765 Score = 355 bits (911), Expect = 9e-96 Identities = 159/241 (65%), Positives = 200/241 (82%) Frame = -2 Query: 963 YGVEPTVDHYDCMIDIYARAGLLKKAYELIKSMPFQPDAMSWKSLLGGCSVHRNFELGKI 784 YGV PT+DHY+CMID+Y+RAGLL++A E+I+S+PF+PD MSWKSLLGGC HRN E+G I Sbjct: 525 YGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMI 584 Query: 783 AAEELLRVDPEDIAAYVLMFNLYVSSGKWNEAADVRRRMAERDLRKEVGCSWITIKGQVH 604 AA+ + R+DP D A YV+MFNLY +GKW+EAA R+ MAER+LRKEV CSWI +KG+VH Sbjct: 585 AADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVH 644 Query: 603 RFIVGDKYHPQTEAIYSKLNELKFPRTKNEHVILSEDDAGNNLSERRDQLLDHSERLAIA 424 RF+VGD++HPQTE IYSKL EL F K++ +L+E++A + +ER++QLLDHSERLAIA Sbjct: 645 RFVVGDRHHPQTEQIYSKLKELNFSFKKSKERLLNEENALCDFTERKEQLLDHSERLAIA 704 Query: 423 YGLISVPTDTAIVIFKNLRACKDCHDFAKHVSVITGREIVVRDSSRFHHFKSGECSCGDY 244 YGLI DT I++FKN R+CKDCHDFAK VS++TGRE+VVRD +RFHH SGECSC DY Sbjct: 705 YGLICTAADTPIMVFKNTRSCKDCHDFAKRVSIVTGRELVVRDGNRFHHINSGECSCRDY 764 Query: 243 W 241 W Sbjct: 765 W 765 >ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270, chloroplastic-like [Glycine max] Length = 753 Score = 351 bits (901), Expect = 1e-94 Identities = 161/241 (66%), Positives = 196/241 (81%) Frame = -2 Query: 963 YGVEPTVDHYDCMIDIYARAGLLKKAYELIKSMPFQPDAMSWKSLLGGCSVHRNFELGKI 784 YGV PT+DHY+CMIDIY+RAGLL +A E+I+SMPF+PD MSWKSLLGGC RN E+G I Sbjct: 513 YGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGGCWSRRNLEIGMI 572 Query: 783 AAEELLRVDPEDIAAYVLMFNLYVSSGKWNEAADVRRRMAERDLRKEVGCSWITIKGQVH 604 AA+ + R+DP D A YV+MFNLY +GKW+EAA R+ MAER+LRKEV CSWI +KG+VH Sbjct: 573 AADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVH 632 Query: 603 RFIVGDKYHPQTEAIYSKLNELKFPRTKNEHVILSEDDAGNNLSERRDQLLDHSERLAIA 424 RF+VGD++HPQTE IYSKL EL K E +L+E++A + +ER+DQLLDHSERLAIA Sbjct: 633 RFVVGDRHHPQTEQIYSKLKELNVSFKKGEERLLNEENALCDFTERKDQLLDHSERLAIA 692 Query: 423 YGLISVPTDTAIVIFKNLRACKDCHDFAKHVSVITGREIVVRDSSRFHHFKSGECSCGDY 244 YGLI DT I++FKN R+CKDCH+FAK VSV+TGRE+VVRD +RFHH SGECSC DY Sbjct: 693 YGLICTAADTPIMVFKNTRSCKDCHEFAKRVSVVTGRELVVRDGNRFHHINSGECSCRDY 752 Query: 243 W 241 W Sbjct: 753 W 753 >emb|CBI35666.3| unnamed protein product [Vitis vinifera] Length = 762 Score = 348 bits (893), Expect = 1e-93 Identities = 161/242 (66%), Positives = 199/242 (82%), Gaps = 1/242 (0%) Frame = -2 Query: 963 YGVEPTVDHYDCMIDIYARAGLLKKAYELIKSMPFQPDAMSWKSLLGGCSVHRNFELGKI 784 YGV+PT+DHYDCMID Y+RAGLL++A ELI MPF+PDAMSWKSLLGGC H + +LGKI Sbjct: 521 YGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKI 580 Query: 783 AAEELLRVDPEDIAAYVLMFNLYVSSGKWNEAADVRRRMAERDLRKEVGCSWITIKGQVH 604 AAE L R+DP D A Y+L+FNLY + GKW EA VR+ MAER+L+KEV CSWI++KGQVH Sbjct: 581 AAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVH 640 Query: 603 RFIVGDKYHPQTEAIYSKLNELKFPRTKNEHVILS-EDDAGNNLSERRDQLLDHSERLAI 427 RF+VGD++HPQTEAIYSKL E K + +L+ EDD +LS R++QLLDHSE+LAI Sbjct: 641 RFVVGDRHHPQTEAIYSKLEEFKCSVIDSPVRLLNEEDDVSCSLSARKEQLLDHSEKLAI 700 Query: 426 AYGLISVPTDTAIVIFKNLRACKDCHDFAKHVSVITGREIVVRDSSRFHHFKSGECSCGD 247 A+GLIS + I++FKNLRAC+DCH+F K VS++TGR+IVVRDS+RFHHFKSG+CSC D Sbjct: 701 AFGLISTEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCND 760 Query: 246 YW 241 YW Sbjct: 761 YW 762 >ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g13270, chloroplastic; Flags: Precursor gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana] gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 752 Score = 317 bits (813), Expect = 2e-84 Identities = 151/243 (62%), Positives = 183/243 (75%), Gaps = 2/243 (0%) Frame = -2 Query: 963 YGVEPTVDHYDCMIDIYARAGLLKKAYELIKSMPFQPDAMSWKSLLGGCSVHRNFELGKI 784 Y V PT+DHYDCMIDIYAR+GLL +A + +K+MPF+PDAMSWK L GC H+N ELG+I Sbjct: 518 YNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEI 577 Query: 783 AAEELLRVDPEDIAAYVLMFNLYVSSGKWNEAADVRRRMAERDLRKEVGCSWITIKGQVH 604 A EEL ++DPED A YVL FNLY +GKW EAA++ + M ER L+KE+ CSWI KG++H Sbjct: 578 AGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIH 637 Query: 603 RFIVGDKYHPQTEAIYSKLNELKFPRTKNEHVILSEDDAGNNLSERRDQLLDHSERLAIA 424 RFIVGDK+HPQT+ IY KL E + D N++ERR+QLLDHSERLAIA Sbjct: 638 RFIVGDKHHPQTQEIYEKLKEF--------DGFMEGDMFQCNMTERREQLLDHSERLAIA 689 Query: 423 YGLISV--PTDTAIVIFKNLRACKDCHDFAKHVSVITGREIVVRDSSRFHHFKSGECSCG 250 +GLISV I +FKNLRAC DCH+FAKHVS++TG EIV+RDS RFHHFK G+CSC Sbjct: 690 FGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCN 749 Query: 249 DYW 241 DYW Sbjct: 750 DYW 752