BLASTX nr result

ID: Cnidium21_contig00012502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012502
         (1241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312609.1| predicted protein [Populus trichocarpa] gi|2...   739   0.0  
gb|ADN33838.1| pre-mRNA splicing factor [Cucumis melo subsp. melo]    732   0.0  
ref|XP_002315592.1| predicted protein [Populus trichocarpa] gi|2...   731   0.0  
ref|XP_002262666.1| PREDICTED: pre-mRNA-processing factor 17-lik...   730   0.0  
ref|XP_004155354.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro...   730   0.0  

>ref|XP_002312609.1| predicted protein [Populus trichocarpa] gi|222852429|gb|EEE89976.1|
            predicted protein [Populus trichocarpa]
          Length = 581

 Score =  739 bits (1907), Expect = 0.0
 Identities = 345/396 (87%), Positives = 363/396 (91%)
 Frame = +2

Query: 2    VDDPSTDEWLKKNRKSPWSGKKGEMETELTEEQXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
            V++P+TD WL KNRKSPW+GKK  ++TEL+EEQ                           
Sbjct: 188  VENPATDAWLMKNRKSPWAGKKEGLQTELSEEQQKYAEEHARKKAEKAGGEKGEVVADK- 246

Query: 182  XTTFHGKEERDYQGRSWIAPPKDAKASNEHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHL 361
             TTFHGKEERDYQGRSW+APPKDAKASN+HCYIPKRLVHTWSGHTKGVSAIRFFPKYGHL
Sbjct: 247  -TTFHGKEERDYQGRSWLAPPKDAKASNDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHL 305

Query: 362  ILSAGMDSKVKIWDVFNSGKCLRTYMGHSKAVRDISFCNDGSKFLTASYDKNIKYWDTET 541
            ILSAGMD+KVKIWDVFNSGKC+RTYMGHSKAVRDISFCNDG+KFLTASYDKNIKYWDTET
Sbjct: 306  ILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET 365

Query: 542  GQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQHLGAVNT 721
            GQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQHLGAVNT
Sbjct: 366  GQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQHLGAVNT 425

Query: 722  ITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN 901
            ITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMP+ISLHPN+NWLAAQSLDN
Sbjct: 426  ITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPAISLHPNSNWLAAQSLDN 485

Query: 902  QILIYSTRERFQLNKKKRFAGHVIAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVF 1081
            QILIYSTRERFQLNKKKRFAGH++AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVF
Sbjct: 486  QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVF 545

Query: 1082 KTLKCHEGVTIGCEWHPLEQSKVATCGWDGLIKYWD 1189
            +TLKCHEGV IGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 546  RTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581


>gb|ADN33838.1| pre-mRNA splicing factor [Cucumis melo subsp. melo]
          Length = 581

 Score =  732 bits (1890), Expect = 0.0
 Identities = 342/396 (86%), Positives = 361/396 (91%)
 Frame = +2

Query: 2    VDDPSTDEWLKKNRKSPWSGKKGEMETELTEEQXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
            VD+P++D WL KNRKSPWSGKK  ++TELTEEQ                           
Sbjct: 188  VDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKGEVTADK- 246

Query: 182  XTTFHGKEERDYQGRSWIAPPKDAKASNEHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHL 361
             +TFHGKEERDYQGRSWIAPPKDAKA+N+HCYIPKRLVHTWSGHTKGVSAIRFFPK+GHL
Sbjct: 247  -STFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHL 305

Query: 362  ILSAGMDSKVKIWDVFNSGKCLRTYMGHSKAVRDISFCNDGSKFLTASYDKNIKYWDTET 541
            ILSAGMD+KVKIWDVFNSGKC+RTYMGHS+AVRDISFCNDGSKFLTA YDK IKYWDTET
Sbjct: 306  ILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTET 365

Query: 542  GQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQHLGAVNT 721
            GQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN+GQITQEYDQHLGAVNT
Sbjct: 366  GQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNT 425

Query: 722  ITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN 901
            ITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSIS+HPNTNWLAAQSLDN
Sbjct: 426  ITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDN 485

Query: 902  QILIYSTRERFQLNKKKRFAGHVIAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVF 1081
            QILIYSTRERFQLNKKKRFAGH++AGYACQVNFSPDGRFVMSGDGEGKCWFWDWK+CKVF
Sbjct: 486  QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVF 545

Query: 1082 KTLKCHEGVTIGCEWHPLEQSKVATCGWDGLIKYWD 1189
            +TLKCHEGV IGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 546  RTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581


>ref|XP_002315592.1| predicted protein [Populus trichocarpa] gi|222864632|gb|EEF01763.1|
            predicted protein [Populus trichocarpa]
          Length = 573

 Score =  731 bits (1886), Expect = 0.0
 Identities = 343/395 (86%), Positives = 359/395 (90%)
 Frame = +2

Query: 2    VDDPSTDEWLKKNRKSPWSGKKGEMETELTEEQXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
            V++P+TD WL KNRKSPW+GKK  ++TELTEEQ                           
Sbjct: 181  VENPATDAWLMKNRKSPWAGKKEGLQTELTEEQKKYAEEHARKKEEKAGGEKGELVADK- 239

Query: 182  XTTFHGKEERDYQGRSWIAPPKDAKASNEHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHL 361
             TTFHGKEERDYQGRSWIAPPKDAKASN+HCYIPKRLVHTWSGHTKGVSAIRFFPK+GHL
Sbjct: 240  -TTFHGKEERDYQGRSWIAPPKDAKASNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHL 298

Query: 362  ILSAGMDSKVKIWDVFNSGKCLRTYMGHSKAVRDISFCNDGSKFLTASYDKNIKYWDTET 541
            ILSAGMD+KVKIWDVFNSGKC+RTYMGHSKAVRDISFCNDGSKFLTA YDKNIKYWDTET
Sbjct: 299  ILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGSKFLTAGYDKNIKYWDTET 358

Query: 542  GQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQHLGAVNT 721
            GQVIS+FSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN+GQITQEYDQHLGAVNT
Sbjct: 359  GQVISSFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNT 418

Query: 722  ITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN 901
            ITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISLHPN NWLAAQSLDN
Sbjct: 419  ITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNMNWLAAQSLDN 478

Query: 902  QILIYSTRERFQLNKKKRFAGHVIAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVF 1081
            QILIYSTRERFQLNKKKRFAGH++AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVF
Sbjct: 479  QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVF 538

Query: 1082 KTLKCHEGVTIGCEWHPLEQSKVATCGWDGLIKYW 1186
            +TLKCHEGV IG EWHPLEQSKVATCGWDGLIKYW
Sbjct: 539  RTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYW 573


>ref|XP_002262666.1| PREDICTED: pre-mRNA-processing factor 17-like [Vitis vinifera]
          Length = 583

 Score =  730 bits (1885), Expect = 0.0
 Identities = 342/395 (86%), Positives = 359/395 (90%)
 Frame = +2

Query: 2    VDDPSTDEWLKKNRKSPWSGKKGEMETELTEEQXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
            V +P+TD WL KN+KSPW+GKK  ++TELTEEQ                           
Sbjct: 190  VQNPATDTWLLKNKKSPWAGKKEGLQTELTEEQKKYAEEYAKKKGEEKGAAEKGEFVTDK 249

Query: 182  XTTFHGKEERDYQGRSWIAPPKDAKASNEHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHL 361
             +TFHGKEERDYQGRSWIAPPKDAKA+N+HCYIPKRLVHTWSGHTKGVSAIRFFPK+GHL
Sbjct: 250  -STFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHL 308

Query: 362  ILSAGMDSKVKIWDVFNSGKCLRTYMGHSKAVRDISFCNDGSKFLTASYDKNIKYWDTET 541
            ILSAGMD+KVKIWDVFNSGKC+RTYMGHSKAVRDISFCNDG+KFLTA YDKNIKYWDTET
Sbjct: 309  ILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAGYDKNIKYWDTET 368

Query: 542  GQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQHLGAVNT 721
            GQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN+GQITQEYDQHLGAVNT
Sbjct: 369  GQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNT 428

Query: 722  ITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN 901
            ITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN
Sbjct: 429  ITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN 488

Query: 902  QILIYSTRERFQLNKKKRFAGHVIAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVF 1081
            QILIYSTRERFQLNKKKRFAGH+ AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVF
Sbjct: 489  QILIYSTRERFQLNKKKRFAGHIAAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVF 548

Query: 1082 KTLKCHEGVTIGCEWHPLEQSKVATCGWDGLIKYW 1186
            +TLKCHEGV IGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 549  RTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 583


>ref|XP_004155354.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing factor 17-like
            [Cucumis sativus]
          Length = 580

 Score =  730 bits (1884), Expect = 0.0
 Identities = 341/395 (86%), Positives = 360/395 (91%)
 Frame = +2

Query: 2    VDDPSTDEWLKKNRKSPWSGKKGEMETELTEEQXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
            VD+P++D WL KNRKSPWSGKK  ++TELTEEQ                           
Sbjct: 188  VDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKGEVTSDK- 246

Query: 182  XTTFHGKEERDYQGRSWIAPPKDAKASNEHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHL 361
             +TFHGKEERDYQGRSWIAPPKDAKA+N+HCYIPKRLVHTWSGHTKGVSAIRFFPK+GHL
Sbjct: 247  -STFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHL 305

Query: 362  ILSAGMDSKVKIWDVFNSGKCLRTYMGHSKAVRDISFCNDGSKFLTASYDKNIKYWDTET 541
            ILSAGMD+KVKIWDVFNSGKC+RTYMGHS+AVRDISFCNDGSKFLTA YDK IKYWDTET
Sbjct: 306  ILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTET 365

Query: 542  GQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQHLGAVNT 721
            GQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN+GQITQEYDQHLGAVNT
Sbjct: 366  GQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNT 425

Query: 722  ITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN 901
            ITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSIS+HPNTNWLAAQSLDN
Sbjct: 426  ITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDN 485

Query: 902  QILIYSTRERFQLNKKKRFAGHVIAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVF 1081
            QILIYSTRERFQLNKKKRFAGH++AGYACQVNFSPDGRFVMSGDGEGKCWFWDWK+CKVF
Sbjct: 486  QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVF 545

Query: 1082 KTLKCHEGVTIGCEWHPLEQSKVATCGWDGLIKYW 1186
            +TLKCHEGV IGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 546  RTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580


Top