BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012487
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610228.1| RING finger-like protein [Medicago truncatul...   107   2e-21
ref|XP_002325091.1| predicted protein [Populus trichocarpa] gi|2...   105   7e-21
gb|AFK34620.1| unknown [Medicago truncatula]                          102   6e-20
ref|XP_002325090.1| predicted protein [Populus trichocarpa] gi|2...    97   3e-18
gb|AEQ20638.1| RING-H2 zinc finger protein [Manihot esculenta]         95   1e-17

>ref|XP_003610228.1| RING finger-like protein [Medicago truncatula]
           gi|355511283|gb|AES92425.1| RING finger-like protein
           [Medicago truncatula]
          Length = 182

 Score =  107 bits (266), Expect = 2e-21
 Identities = 62/151 (41%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
 Frame = +3

Query: 39  HQSHTPPA--KRNSVLVSLILKPIIMLFILSTF-LFIGIATVSTIFFLLAVSSLXXXXXX 209
           H  H  P   K N  L+SL LKPIIML + S F LF+G A    +   L   +L      
Sbjct: 4   HHHHGDPEQPKPNPNLLSLFLKPIIMLLLTSLFFLFLGFAAFLLLNLFLLAGALHRLRFR 63

Query: 210 XXXXXXXXXXKISTIELQ-QHLPRFRY-EGSV-ETNKECAVCLESFETGEWCRRLVGCNH 380
                       + +  +  +LP FR  +GSV E +  CAVCL+ F  G+WCR L  C H
Sbjct: 64  PTPTRRLQSLTDAFLPREINNLPNFRITKGSVSEPDSRCAVCLDGFRNGQWCRNLAACGH 123

Query: 381 VFHVSCVDSWLAKVLNCPVCRAPVRFNSRAS 473
           VFH  C+D+WL KV  CP CR PVR N + S
Sbjct: 124 VFHRRCIDTWLLKVATCPTCRTPVRSNPQTS 154


>ref|XP_002325091.1| predicted protein [Populus trichocarpa] gi|222866525|gb|EEF03656.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score =  105 bits (262), Expect = 7e-21
 Identities = 66/161 (40%), Positives = 85/161 (52%), Gaps = 8/161 (4%)
 Frame = +3

Query: 3   PIHHQDYHESNIHQSHTPPAKRNSVLVSLILKPIIMLFI-LSTFLFIGIATVSTIFFLLA 179
           P HH D+H ++       P K N   +SLILK IIM  I +  FLF+G+A +  +F   A
Sbjct: 4   PHHHHDHHRTH----GGAPPKPNQEFLSLILKAIIMTAITIFFFLFLGVAAILLLF---A 56

Query: 180 VSSLXXXXXXXXXXXXXXXXKISTIELQQHLPRFRYEGSVETNKE-------CAVCLESF 338
            S+L                K    EL++ LPRFR+  S +T  E       C VCLE  
Sbjct: 57  TSALHRHSTTSSNSPKALPLK----ELKK-LPRFRF--STKTRPETGADQSSCVVCLEEI 109

Query: 339 ETGEWCRRLVGCNHVFHVSCVDSWLAKVLNCPVCRAPVRFN 461
           + G+WCR LVGC HVFH  CVD+WL KV  CP+CR  V  +
Sbjct: 110 KQGQWCRNLVGCGHVFHRKCVDAWLVKVSACPICRTRVELD 150


>gb|AFK34620.1| unknown [Medicago truncatula]
          Length = 182

 Score =  102 bits (254), Expect = 6e-20
 Identities = 61/151 (40%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
 Frame = +3

Query: 39  HQSHTPPA--KRNSVLVSLILKPIIMLFILSTF-LFIGIATVSTIFFLLAVSSLXXXXXX 209
           H  H  P   K N  L+SL LKPIIML + S F LF+G A    +   L   +L      
Sbjct: 4   HHHHGDPEQPKPNPNLLSLFLKPIIMLLLTSLFFLFLGFAAFLLLNLFLLAGALHRLRFR 63

Query: 210 XXXXXXXXXXKISTIELQ-QHLPRFRY-EGSV-ETNKECAVCLESFETGEWCRRLVGCNH 380
                       + +  +  +LP FR  +GSV E +  CAVCL+ F  G+W R L  C H
Sbjct: 64  PTPTRRLQSLTDAFLPREINNLPNFRITKGSVSEPDSRCAVCLDGFRNGQWRRNLAACGH 123

Query: 381 VFHVSCVDSWLAKVLNCPVCRAPVRFNSRAS 473
           VFH  C+D+WL KV  CP CR PVR N + S
Sbjct: 124 VFHRRCIDTWLLKVATCPTCRTPVRSNPQTS 154


>ref|XP_002325090.1| predicted protein [Populus trichocarpa] gi|222866524|gb|EEF03655.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 58/148 (39%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
 Frame = +3

Query: 39  HQSHTPPAKRNSVLVSLILKPIIMLFILSTFLFIGIATVSTIFFLLAVSSLXXXXXXXXX 218
           H    PP K N   + L+LK I+M+ I  T LF  +  V+ I  L+  ++L         
Sbjct: 7   HHGGAPP-KPNRKFIFLVLKAIVMIAI--TILFFVLLGVAAILLLIPTAALHRHSTPSSN 63

Query: 219 XXXXXXXKISTIELQQHLPRFRYEGSVETNKE-------CAVCLESFETGEWCRRLVGCN 377
                  K    +L++ LPRFR+  S +T  E       C VCLE  + G+WCR LVGC 
Sbjct: 64  PPKGLPLK----DLKK-LPRFRF--STKTTPETAADQSSCVVCLEDIKQGQWCRNLVGCG 116

Query: 378 HVFHVSCVDSWLAKVLNCPVCRAPVRFN 461
           HV H+ CVDSWL KV  CP+CR  V F+
Sbjct: 117 HVLHMKCVDSWLVKVSACPICRTRVEFD 144


>gb|AEQ20638.1| RING-H2 zinc finger protein [Manihot esculenta]
          Length = 174

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 55/155 (35%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
 Frame = +3

Query: 18  DYHESNIHQSHTPPA---KRNSVLVSLILKPIIMLFILSTF-LFIGIATVSTIFFLLAVS 185
           D+H+   H   +P +   K N  ++S+ILK IIM  I + F LF+G+A    I  LLA +
Sbjct: 8   DHHQHRPHGGASPQSLAPKSNPKVLSMILKAIIMTAITTLFFLFLGVAA---ILLLLATA 64

Query: 186 SLXXXXXXXXXXXXXXXXKISTIELQQHLPRFRYEGSV--ETNKECAVCLESFETGEWCR 359
           +                  +      + LP+F++      E   +C VCLE    G+WCR
Sbjct: 65  AFHRHSGPSDSAVGLSPKGL------KKLPQFKFSRRTKPEDEADCVVCLEGIRQGQWCR 118

Query: 360 RLVGCNHVFHVSCVDSWLAKVLNCPVCRAPVRFNS 464
           +L+ C HVFH  C+D+WL KV  CPVCR  V  +S
Sbjct: 119 KLIACGHVFHRKCIDAWLIKVSACPVCRTRVWLDS 153