BLASTX nr result

ID: Cnidium21_contig00012484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012484
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283525.1| PREDICTED: pollen-specific protein SF3 [Viti...    97   1e-18
ref|NP_001235271.1| uncharacterized protein LOC100500501 [Glycin...    96   3e-18
ref|NP_001238190.1| uncharacterized protein LOC100500444 [Glycin...    96   3e-18
ref|XP_002511450.1| Pollen-specific protein SF3, putative [Ricin...    96   3e-18
gb|AAX73300.1| putative pollen specific LIM domain-containing pr...    96   4e-18

>ref|XP_002283525.1| PREDICTED: pollen-specific protein SF3 [Vitis vinifera]
           gi|297733831|emb|CBI15078.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 41/44 (93%), Positives = 44/44 (100%)
 Frame = +3

Query: 222 MASFAGTTQKCKACDKTVYLVDELTADNKVYHKSCFRCHHCKGT 353
           MA+FAGTTQKCKAC+KTVYLVDELTADNKVYHK+CFRCHHCKGT
Sbjct: 1   MATFAGTTQKCKACEKTVYLVDELTADNKVYHKACFRCHHCKGT 44



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 22/42 (52%), Positives = 30/42 (71%)
 Frame = +3

Query: 216 KIMASFAGTTQKCKACDKTVYLVDELTADNKVYHKSCFRCHH 341
           K+ + FAGT +KC AC KTVY ++++  D   YHK+CFRC H
Sbjct: 95  KVSSMFAGTQEKCVACKKTVYPIEKVGVDGTSYHKACFRCTH 136


>ref|NP_001235271.1| uncharacterized protein LOC100500501 [Glycine max]
           gi|255630484|gb|ACU15600.1| unknown [Glycine max]
          Length = 192

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 40/45 (88%), Positives = 45/45 (100%)
 Frame = +3

Query: 219 IMASFAGTTQKCKACDKTVYLVDELTADNKVYHKSCFRCHHCKGT 353
           +MASFAGTTQKCKAC+KTVYLVD+LTADNK+YHKSCFRC+HCKGT
Sbjct: 1   MMASFAGTTQKCKACEKTVYLVDQLTADNKIYHKSCFRCYHCKGT 45



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 22/42 (52%), Positives = 29/42 (69%)
 Frame = +3

Query: 216 KIMASFAGTTQKCKACDKTVYLVDELTADNKVYHKSCFRCHH 341
           K+   FAGT +KC AC KTVY ++++  D   YHK+CFRC H
Sbjct: 99  KVSNLFAGTQEKCVACKKTVYPIEKVAVDGTFYHKACFRCTH 140


>ref|NP_001238190.1| uncharacterized protein LOC100500444 [Glycine max]
           gi|255630349|gb|ACU15531.1| unknown [Glycine max]
          Length = 192

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 40/45 (88%), Positives = 45/45 (100%)
 Frame = +3

Query: 219 IMASFAGTTQKCKACDKTVYLVDELTADNKVYHKSCFRCHHCKGT 353
           +MASFAGTTQKCKAC+KTVYLVD+LTADNK+YHKSCFRC+HCKGT
Sbjct: 1   MMASFAGTTQKCKACEKTVYLVDQLTADNKIYHKSCFRCYHCKGT 45



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 22/42 (52%), Positives = 29/42 (69%)
 Frame = +3

Query: 216 KIMASFAGTTQKCKACDKTVYLVDELTADNKVYHKSCFRCHH 341
           K+   FAGT +KC AC KTVY ++++  D   YHK+CFRC H
Sbjct: 99  KVSNLFAGTQEKCVACKKTVYPIEKVAVDGTSYHKACFRCTH 140


>ref|XP_002511450.1| Pollen-specific protein SF3, putative [Ricinus communis]
           gi|223550565|gb|EEF52052.1| Pollen-specific protein SF3,
           putative [Ricinus communis]
          Length = 190

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 40/44 (90%), Positives = 44/44 (100%)
 Frame = +3

Query: 222 MASFAGTTQKCKACDKTVYLVDELTADNKVYHKSCFRCHHCKGT 353
           MA+FAGTTQKCKAC+KTVYLVD+LTADNKVYHK+CFRCHHCKGT
Sbjct: 1   MATFAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGT 44



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 21/42 (50%), Positives = 29/42 (69%)
 Frame = +3

Query: 216 KIMASFAGTTQKCKACDKTVYLVDELTADNKVYHKSCFRCHH 341
           ++ + FAGT  KC AC KTVY ++++  D   YHK+CFRC H
Sbjct: 98  RVSSMFAGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTH 139


>gb|AAX73300.1| putative pollen specific LIM domain-containing protein [Solanum
           lycopersicum]
          Length = 179

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 40/44 (90%), Positives = 43/44 (97%)
 Frame = +3

Query: 222 MASFAGTTQKCKACDKTVYLVDELTADNKVYHKSCFRCHHCKGT 353
           MASF GTTQKCKAC+KTVYLVD+LTADNKVYHK+CFRCHHCKGT
Sbjct: 1   MASFGGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGT 44


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