BLASTX nr result

ID: Cnidium21_contig00012472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012472
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285624.1| PREDICTED: GATA transcription factor 1-like ...   129   3e-28
ref|XP_002518163.1| GATA transcription factor, putative [Ricinus...   127   1e-27
ref|XP_002299291.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
dbj|BAC98492.1| AG-motif binding protein-2 [Nicotiana tabacum]        120   9e-26
gb|AAM65139.1| GATA transcription factor 1 (AtGATA-1) [Arabidops...   115   5e-24

>ref|XP_002285624.1| PREDICTED: GATA transcription factor 1-like [Vitis vinifera]
          Length = 251

 Score =  129 bits (323), Expect = 3e-28
 Identities = 56/82 (68%), Positives = 63/82 (76%)
 Frame = -1

Query: 246 WWNQVNVRNVKHDFPKALQPVTSGSAIGRRCQHCLAEKTPQWRAGPMGPKTLCNACGVRY 67
           WW+     N  H  P   +   + S IGR+CQHC AEKTPQWRAGP+GPKTLCNACGVRY
Sbjct: 146 WWSSQGNTNANHSSPTNSKQTITSSTIGRKCQHCQAEKTPQWRAGPLGPKTLCNACGVRY 205

Query: 66  KSGRLVPEYRPANSPTFSSQVH 1
           KSGRLV EYRPA+SPTFSS+VH
Sbjct: 206 KSGRLVAEYRPASSPTFSSKVH 227


>ref|XP_002518163.1| GATA transcription factor, putative [Ricinus communis]
           gi|223542759|gb|EEF44296.1| GATA transcription factor,
           putative [Ricinus communis]
          Length = 205

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/85 (69%), Positives = 67/85 (78%)
 Frame = -1

Query: 255 QAGWWNQVNVRNVKHDFPKALQPVTSGSAIGRRCQHCLAEKTPQWRAGPMGPKTLCNACG 76
           Q  WW+Q N++ VK          +S S IGR+CQHC AEKTPQWRAGP+GPKTLCNACG
Sbjct: 100 QQCWWSQENLKKVK-------VVKSSSSTIGRKCQHCGAEKTPQWRAGPLGPKTLCNACG 152

Query: 75  VRYKSGRLVPEYRPANSPTFSSQVH 1
           VRYKSGRLVPEYRPA+SPTFSS +H
Sbjct: 153 VRYKSGRLVPEYRPASSPTFSSVLH 177


>ref|XP_002299291.1| predicted protein [Populus trichocarpa] gi|222846549|gb|EEE84096.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  122 bits (307), Expect = 2e-26
 Identities = 57/86 (66%), Positives = 64/86 (74%)
 Frame = -1

Query: 258 QQAGWWNQVNVRNVKHDFPKALQPVTSGSAIGRRCQHCLAEKTPQWRAGPMGPKTLCNAC 79
           +Q  WW+Q N    K        P  S + +GR+CQHC  EKTPQWRAGP GPKTLCNAC
Sbjct: 153 EQECWWSQENFITRK--------PAVSVAKLGRKCQHCGVEKTPQWRAGPDGPKTLCNAC 204

Query: 78  GVRYKSGRLVPEYRPANSPTFSSQVH 1
           GVRYKSGRLVPEYRPANSPTFSS++H
Sbjct: 205 GVRYKSGRLVPEYRPANSPTFSSKLH 230


>dbj|BAC98492.1| AG-motif binding protein-2 [Nicotiana tabacum]
          Length = 289

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
 Frame = -1

Query: 240 NQVNVRNVKHDFPKALQPVTSG--SAIGRRCQHCLAEKTPQWRAGPMGPKTLCNACGVRY 67
           N+ + ++VK   P    P+ S   ++IGRRCQHC A+KTPQWRAGP+GPKTLCNACGVRY
Sbjct: 177 NKPSFKSVKQREPLLSLPLNSAKSASIGRRCQHCGADKTPQWRAGPLGPKTLCNACGVRY 236

Query: 66  KSGRLVPEYRPANSPTFSSQVH 1
           KSGRL+PEYRPANSPTFS  VH
Sbjct: 237 KSGRLLPEYRPANSPTFSPTVH 258


>gb|AAM65139.1| GATA transcription factor 1 (AtGATA-1) [Arabidopsis thaliana]
          Length = 268

 Score =  115 bits (287), Expect = 5e-24
 Identities = 49/67 (73%), Positives = 57/67 (85%)
 Frame = -1

Query: 201 KALQPVTSGSAIGRRCQHCLAEKTPQWRAGPMGPKTLCNACGVRYKSGRLVPEYRPANSP 22
           K +    +   +GR+CQHC AEKTPQWRAGP GPKTLCNACGVRYKSGRLVPEYRPANSP
Sbjct: 175 KTMTVAAAALIMGRKCQHCGAEKTPQWRAGPAGPKTLCNACGVRYKSGRLVPEYRPANSP 234

Query: 21  TFSSQVH 1
           TF++++H
Sbjct: 235 TFTAELH 241


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