BLASTX nr result

ID: Cnidium21_contig00012455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012455
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889580.1| predicted protein [Arabidopsis lyrata subsp....    62   2e-07
ref|NP_172091.1| uncharacterized protein [Arabidopsis thaliana] ...    61   4e-07
dbj|BAJ99959.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   9e-07
emb|CAE04829.1| OSJNBa0084K01.1 [Oryza sativa Japonica Group] gi...    60   9e-07
ref|XP_002322439.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06

>ref|XP_002889580.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335422|gb|EFH65839.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 79

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 27/40 (67%), Positives = 34/40 (85%)
 Frame = -3

Query: 854 MWKEKSPGVKILWIWTIGTAAILVANVATTRLRDLQKQMD 735
           M +EKSPG+KILWIWTIGTAAILV +V  TR++D+Q  M+
Sbjct: 1   MGREKSPGLKILWIWTIGTAAILVTSVVRTRMQDMQSMMN 40


>ref|NP_172091.1| uncharacterized protein [Arabidopsis thaliana]
           gi|29824380|gb|AAP04150.1| unknown protein [Arabidopsis
           thaliana] gi|30793879|gb|AAP40392.1| unknown protein
           [Arabidopsis thaliana] gi|110739093|dbj|BAF01463.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332189808|gb|AEE27929.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 78

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 26/40 (65%), Positives = 34/40 (85%)
 Frame = -3

Query: 854 MWKEKSPGVKILWIWTIGTAAILVANVATTRLRDLQKQMD 735
           M +EKSPG+KILW+WTIGTAAILV +V  TR++D+Q  M+
Sbjct: 1   MGREKSPGLKILWVWTIGTAAILVTSVVRTRMQDMQTMMN 40


>dbj|BAJ99959.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 72

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = -3

Query: 851 WKEKSPGVKILWIWTIGTAAILVANVATTRLRDLQ 747
           W +KSPG+KILWIWT+GTAAI++ NV  TR+ D+Q
Sbjct: 5   WSQKSPGLKILWIWTLGTAAIMITNVVRTRVNDMQ 39


>emb|CAE04829.1| OSJNBa0084K01.1 [Oryza sativa Japonica Group]
           gi|38345205|emb|CAE54542.1| OSJNBa0015K02.21 [Oryza
           sativa Japonica Group] gi|116310044|emb|CAH67067.1|
           H0112G12.12 [Oryza sativa Indica Group]
           gi|125591944|gb|EAZ32294.1| hypothetical protein
           OsJ_16502 [Oryza sativa Japonica Group]
           gi|215697772|dbj|BAG91965.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740486|dbj|BAG97142.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218195756|gb|EEC78183.1| hypothetical protein
           OsI_17780 [Oryza sativa Indica Group]
          Length = 66

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = -3

Query: 851 WKEKSPGVKILWIWTIGTAAILVANVATTRLRDLQK 744
           W EK PG+KILWIWT+GTA I++ NV  TR+ D+QK
Sbjct: 5   WSEKGPGLKILWIWTLGTAGIMITNVVRTRVNDMQK 40


>ref|XP_002322439.1| predicted protein [Populus trichocarpa] gi|222869435|gb|EEF06566.1|
           predicted protein [Populus trichocarpa]
          Length = 73

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
 Frame = -3

Query: 854 MWKEKSPGVKILWIWTIGTAAILVANVATTRLRDLQKQM--DXXXXXXXXXXXQESDPVI 681
           M +E SPG+KILW+WTIGTA ILV +V  TRL+D+++ M  D             SDPV+
Sbjct: 1   MPRETSPGLKILWLWTIGTAGILVTSVVRTRLKDMEQMMNTDHQQQQQEEHQSSLSDPVL 60

Query: 680 VD 675
           +D
Sbjct: 61  LD 62


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