BLASTX nr result

ID: Cnidium21_contig00012441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012441
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269262.1| PREDICTED: uncharacterized protein LOC100255...    86   3e-15
emb|CAN63978.1| hypothetical protein VITISV_006526 [Vitis vinifera]    82   3e-14
ref|XP_002527805.1| conserved hypothetical protein [Ricinus comm...    79   4e-13
ref|XP_002324697.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|NP_567837.1| uncharacterized protein [Arabidopsis thaliana] ...    72   5e-11

>ref|XP_002269262.1| PREDICTED: uncharacterized protein LOC100255532 [Vitis vinifera]
           gi|296090285|emb|CBI40104.3| unnamed protein product
           [Vitis vinifera]
          Length = 290

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/86 (52%), Positives = 53/86 (61%), Gaps = 9/86 (10%)
 Frame = +1

Query: 112 QKPPLGGSP-APNGSMPMFPVMYPVLNPPL--QQGQDQVNRRGGLYAVPTYPFMGPMSAF 282
           Q P   G P +PNG++ MFP+MYP L P L   Q Q+QVNR  G+YAVP  P MGP+S  
Sbjct: 24  QIPTFSGFPVSPNGNIQMFPIMYPALVPGLISLQNQEQVNRGAGIYAVPVPPLMGPISGL 83

Query: 283 PPTTLIPFTYNVPT------GGPTSE 342
           P   LIP TYN+PT      GGP  E
Sbjct: 84  PSNALIPLTYNIPTRTSSSEGGPVGE 109


>emb|CAN63978.1| hypothetical protein VITISV_006526 [Vitis vinifera]
          Length = 172

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/72 (55%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
 Frame = +1

Query: 118 PPLGGSP-APNGSMPMFPVMYPVLNPPL--QQGQDQVNRRGGLYAVPTYPFMGPMSAFPP 288
           P   G P +PNG++ MFP+MYP L P L   Q Q+QVNR  G+YAVP  P MGP+S  P 
Sbjct: 70  PTFSGFPVSPNGNIQMFPIMYPALVPGLISLQNQEQVNRGAGIYAVPVPPLMGPISGLPS 129

Query: 289 TTLIPFTYNVPT 324
             LIP TYN+PT
Sbjct: 130 NALIPLTYNIPT 141


>ref|XP_002527805.1| conserved hypothetical protein [Ricinus communis]
           gi|223532801|gb|EEF34577.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 287

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
 Frame = +1

Query: 136 PAPNGSMPMFPVMYPVLNP---PLQQGQDQVNRRGGLYAVPTYPFMGPMSAFPPTTLIPF 306
           P P G + M+P++YP + P   P  Q QDQ++R  G+YAVP  P MGP++ FP  TLIP 
Sbjct: 27  PYPFGDLQMYPIVYPAMVPGFTPSLQNQDQMHRGAGIYAVPVPPVMGPIAGFPSNTLIPL 86

Query: 307 TYNVPTGGPTSEA 345
           TYNVPT   +S A
Sbjct: 87  TYNVPTTRSSSNA 99


>ref|XP_002324697.1| predicted protein [Populus trichocarpa] gi|222866131|gb|EEF03262.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/109 (41%), Positives = 57/109 (52%), Gaps = 15/109 (13%)
 Frame = +1

Query: 64  EKQKMMKTGIEGDEHTQKPP------------LGGSPA-PNGSMPMFPVMYPVLNPPLQ- 201
           E+ + + + +    +TQ  P              G PA P+G   MFPVMYP L P L  
Sbjct: 3   EQPETVSSSVNQSSNTQNSPEDKLKQSWVPSAFSGFPAYPDGGFQMFPVMYPALVPGLNA 62

Query: 202 -QGQDQVNRRGGLYAVPTYPFMGPMSAFPPTTLIPFTYNVPTGGPTSEA 345
            Q Q+Q N   G+YAVP   FMGP++  P  TLIP T N+PT  PT EA
Sbjct: 63  MQNQEQANHGPGIYAVPVPQFMGPIAGLPSNTLIPLTLNIPT-RPTPEA 110


>ref|NP_567837.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4914420|emb|CAB43671.1| hypothetical protein
           [Arabidopsis thaliana] gi|7269895|emb|CAB79754.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|20466466|gb|AAM20550.1| unknown protein [Arabidopsis
           thaliana] gi|21537007|gb|AAM61348.1| unknown
           [Arabidopsis thaliana] gi|22136434|gb|AAM91295.1|
           unknown protein [Arabidopsis thaliana]
           gi|332660302|gb|AEE85702.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 291

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
 Frame = +1

Query: 49  HSPN*EKQKMMKTGIEGDEHTQKPPLGGSPAPNGSMPMFPVMYPVLNP---PLQQGQDQV 219
           H P+ +K K    GI+  +       G    PNG  PM+PV YP L P   P+Q  ++Q+
Sbjct: 14  HQPSGDK-KPEDVGIKPQDPASSS--GFRAYPNGDSPMYPVFYPGLVPGSNPVQY-EEQM 69

Query: 220 NRRGGLYAVPTYPFMGPMSAFPPTTLIPFTYNVPTGGPTSEA 345
           NR  G+YAVP + F G ++  P   LIP TYNVPT  P +EA
Sbjct: 70  NRGAGIYAVPVHQFGGHVAGLPSNYLIPLTYNVPTTRPNNEA 111


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