BLASTX nr result

ID: Cnidium21_contig00012437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012437
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273343.2| PREDICTED: LOW QUALITY PROTEIN: GATA transcr...    77   3e-12
ref|XP_003611383.1| GATA transcription factor [Medicago truncatu...    77   3e-12
emb|CBI23401.3| unnamed protein product [Vitis vinifera]               77   3e-12
emb|CAN76534.1| hypothetical protein VITISV_006083 [Vitis vinifera]    77   3e-12
ref|XP_002329605.1| predicted protein [Populus trichocarpa] gi|2...    76   5e-12

>ref|XP_002273343.2| PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 26 [Vitis
           vinifera]
          Length = 433

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 41/85 (48%), Positives = 52/85 (61%)
 Frame = -2

Query: 585 KKVVETNYGHEASCFGPKIQLEEPRDSTSSMLDCFQFAAESSDHDLLLNIPSHSSFPQAE 406
           K V + +  +E S F P+     P D  S  LD F F  E SDHDLLL++PS++SFPQAE
Sbjct: 347 KAVEKEHIDNEGSSFSPRSLFALPPDGGSLELDSFTFGDEISDHDLLLDVPSNNSFPQAE 406

Query: 405 LLLPNSGFGAQASTSSS*LCQNHVL 331
           LL P SGFG Q  ++SS     H+L
Sbjct: 407 LLHPGSGFGTQLQSTSSSSAYPHLL 431


>ref|XP_003611383.1| GATA transcription factor [Medicago truncatula]
           gi|355512718|gb|AES94341.1| GATA transcription factor
           [Medicago truncatula]
          Length = 516

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 39/63 (61%), Positives = 46/63 (73%)
 Frame = -2

Query: 543 FGPKIQLEEPRDSTSSMLDCFQFAAESSDHDLLLNIPSHSSFPQAELLLPNSGFGAQAST 364
           + PK     P D++S +LD F F  ESSD DLLL +PS++SFPQAELL P S FGAQAST
Sbjct: 445 YNPKSLFPLPPDASSHLLDSFNFVEESSDQDLLLEVPSNNSFPQAELLHPTSIFGAQAST 504

Query: 363 SSS 355
           SSS
Sbjct: 505 SSS 507


>emb|CBI23401.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 41/85 (48%), Positives = 52/85 (61%)
 Frame = -2

Query: 585 KKVVETNYGHEASCFGPKIQLEEPRDSTSSMLDCFQFAAESSDHDLLLNIPSHSSFPQAE 406
           K V + +  +E S F P+     P D  S  LD F F  E SDHDLLL++PS++SFPQAE
Sbjct: 229 KAVEKEHIDNEGSSFSPRSLFALPPDGGSLELDSFTFGDEISDHDLLLDVPSNNSFPQAE 288

Query: 405 LLLPNSGFGAQASTSSS*LCQNHVL 331
           LL P SGFG Q  ++SS     H+L
Sbjct: 289 LLHPGSGFGTQLQSTSSSSAYPHLL 313


>emb|CAN76534.1| hypothetical protein VITISV_006083 [Vitis vinifera]
          Length = 542

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 41/85 (48%), Positives = 52/85 (61%)
 Frame = -2

Query: 585 KKVVETNYGHEASCFGPKIQLEEPRDSTSSMLDCFQFAAESSDHDLLLNIPSHSSFPQAE 406
           K V + +  +E S F P+     P D  S  LD F F  E SDHDLLL++PS++SFPQAE
Sbjct: 456 KAVEKEHIDNEGSSFSPRSLFALPPDGGSLELDSFTFGDEISDHDLLLDVPSNNSFPQAE 515

Query: 405 LLLPNSGFGAQASTSSS*LCQNHVL 331
           LL P SGFG Q  ++SS     H+L
Sbjct: 516 LLHPGSGFGTQLQSTSSSSAYPHLL 540


>ref|XP_002329605.1| predicted protein [Populus trichocarpa] gi|222870314|gb|EEF07445.1|
           predicted protein [Populus trichocarpa]
          Length = 536

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 38/68 (55%), Positives = 45/68 (66%)
 Frame = -2

Query: 558 HEASCFGPKIQLEEPRDSTSSMLDCFQFAAESSDHDLLLNIPSHSSFPQAELLLPNSGFG 379
           ++ SCF P+     P D +S MLD   F  ESSD DLLL+IPS+ SF QAEL  P + FG
Sbjct: 460 NDGSCFSPRSLFALPTDGSSLMLDSLHFVDESSDQDLLLDIPSNGSFAQAELFYPTNSFG 519

Query: 378 AQASTSSS 355
            QASTSSS
Sbjct: 520 QQASTSSS 527


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