BLASTX nr result

ID: Cnidium21_contig00012427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012427
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304552.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46
ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricin...   181   4e-44
ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [...   175   4e-42
emb|CBI34471.3| unnamed protein product [Vitis vinifera]              171   7e-41
ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [...   167   8e-40

>ref|XP_002304552.1| predicted protein [Populus trichocarpa] gi|222841984|gb|EEE79531.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  189 bits (479), Expect = 3e-46
 Identities = 86/121 (71%), Positives = 103/121 (85%)
 Frame = +3

Query: 6   IRNITVSSVYMENVRKGIKIAGDVGDHPDGKYNRRALPVVKDIVIKNVWGEKVQQAGSIQ 185
           I+NITV+ VYMENVRKGIKIAGDVGDHPD  +N  ALPVV  I +K++WGEKVQQ GSIQ
Sbjct: 292 IKNITVTDVYMENVRKGIKIAGDVGDHPDDSFNPNALPVVYGITLKSIWGEKVQQPGSIQ 351

Query: 186 GLRNSPFTGICLSNIHLNGDTGLKKTPWKCSDISGAAVQVRPWPCSELSSSHETGACSVP 365
           GL+NSPFTGICLSNI+L+G  G + +PWKCSD+SG+A+ V PWPCSEL+S H+TG+CS  
Sbjct: 352 GLKNSPFTGICLSNINLHGVPGPRSSPWKCSDVSGSALLVSPWPCSELTSPHQTGSCSDH 411

Query: 366 F 368
           F
Sbjct: 412 F 412


>ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
           gi|223549848|gb|EEF51336.1| Polygalacturonase precursor,
           putative [Ricinus communis]
          Length = 446

 Score =  181 bits (460), Expect = 4e-44
 Identities = 82/118 (69%), Positives = 100/118 (84%)
 Frame = +3

Query: 6   IRNITVSSVYMENVRKGIKIAGDVGDHPDGKYNRRALPVVKDIVIKNVWGEKVQQAGSIQ 185
           IRNIT S VYM+N RKGIKIAGDVGDHPD  YN  ALPVVK I+ + VWGE V Q G+IQ
Sbjct: 326 IRNITFSDVYMKNARKGIKIAGDVGDHPDDNYNPNALPVVKGIIFRGVWGENVLQPGAIQ 385

Query: 186 GLRNSPFTGICLSNIHLNGDTGLKKTPWKCSDISGAAVQVRPWPCSELSSSHETGACS 359
           GL++SPFTGICLSNI+L+G  G + TPWKCSD+SGAA++V P+PCSEL+++H+TG+CS
Sbjct: 386 GLKSSPFTGICLSNINLHGVPGPRSTPWKCSDVSGAALEVSPFPCSELATTHQTGSCS 443


>ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
           gi|449501789|ref|XP_004161459.1| PREDICTED: probable
           polygalacturonase-like [Cucumis sativus]
          Length = 445

 Score =  175 bits (443), Expect = 4e-42
 Identities = 82/121 (67%), Positives = 96/121 (79%)
 Frame = +3

Query: 6   IRNITVSSVYMENVRKGIKIAGDVGDHPDGKYNRRALPVVKDIVIKNVWGEKVQQAGSIQ 185
           I+NITVS+VYMEN RKG+KIAGD GDHPD K++  ALP+VKDI IKN+WG  VQQAGSI 
Sbjct: 325 IKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNALPIVKDITIKNIWGVNVQQAGSIY 384

Query: 186 GLRNSPFTGICLSNIHLNGDTGLKKTPWKCSDISGAAVQVRPWPCSELSSSHETGACSVP 365
           GLR+SPFTGICLSNI+L G T  +  PW CS +SGAA  V PWPCSEL+S+ + G CS  
Sbjct: 385 GLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGAASLVSPWPCSELTSTDQDGLCSDN 444

Query: 366 F 368
           F
Sbjct: 445 F 445


>emb|CBI34471.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score =  171 bits (432), Expect = 7e-41
 Identities = 82/119 (68%), Positives = 94/119 (78%)
 Frame = +3

Query: 3   VIRNITVSSVYMENVRKGIKIAGDVGDHPDGKYNRRALPVVKDIVIKNVWGEKVQQAGSI 182
           VIRNITVS+VYME  R GIKIAGDVGDHPD  +N  ALPVVK +VI++VWG  V Q GSI
Sbjct: 326 VIRNITVSNVYMEKARTGIKIAGDVGDHPDDNFNPNALPVVKGVVIRDVWGLDVLQPGSI 385

Query: 183 QGLRNSPFTGICLSNIHLNGDTGLKKTPWKCSDISGAAVQVRPWPCSELSSSHETGACS 359
            GL+NSPFTGICLS I+L+G       PWKCSD+SGAAV V PWPCSEL+S  +TG+CS
Sbjct: 386 IGLKNSPFTGICLSKINLHGKIKPGTAPWKCSDVSGAAVGVSPWPCSELTSPGQTGSCS 444


>ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 446

 Score =  167 bits (423), Expect = 8e-40
 Identities = 79/118 (66%), Positives = 96/118 (81%)
 Frame = +3

Query: 6   IRNITVSSVYMENVRKGIKIAGDVGDHPDGKYNRRALPVVKDIVIKNVWGEKVQQAGSIQ 185
           I+NIT+S VYME  RKGI+I+GDVGDHPD K++  ALP+VK + IKNVWG KV QAG IQ
Sbjct: 327 IKNITMSHVYMEEARKGIRISGDVGDHPDDKFDANALPLVKGVTIKNVWGMKVLQAGLIQ 386

Query: 186 GLRNSPFTGICLSNIHLNGDTGLKKTPWKCSDISGAAVQVRPWPCSELSSSHETGACS 359
           GLRNSPFT ICL +I+L+G TG +  PWKCSD+SG A QV PWPCSELSS+ + G+C+
Sbjct: 387 GLRNSPFTDICLYDINLHGVTGPRTPPWKCSDVSGFAHQVSPWPCSELSSNQQ-GSCA 443


Top