BLASTX nr result

ID: Cnidium21_contig00012424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012424
         (1329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245...   384   e-104
ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vi...   380   e-103
ref|XP_002518926.1| RNA-binding protein, putative [Ricinus commu...   378   e-102
emb|CBI34603.3| unnamed protein product [Vitis vinifera]              377   e-102
ref|XP_002317806.1| predicted protein [Populus trichocarpa] gi|2...   375   e-101

>ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245327 [Vitis vinifera]
            gi|302143972|emb|CBI23077.3| unnamed protein product
            [Vitis vinifera]
          Length = 361

 Score =  384 bits (987), Expect = e-104
 Identities = 192/218 (88%), Positives = 204/218 (93%)
 Frame = -3

Query: 1321 GNSARRKKIGNNHGKRRMNSRTSMAQREEVIKRTVYVSDIDHQVTEEQLAALFISCGQVV 1142
            GN+ RRK+  N + KRR+NSRTSMAQREEVIKRTVYVSDID QVTEE LAALFI+CGQVV
Sbjct: 145  GNAGRRKR-NNYNQKRRINSRTSMAQREEVIKRTVYVSDIDQQVTEEDLAALFINCGQVV 203

Query: 1141 DCRICGDPNSVLRFAFVEFTDEEGARNALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 962
            DCRICGDPNSVLRFAFVEFTDEEGAR ALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPR
Sbjct: 204  DCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPR 263

Query: 961  SEDEREMCARTIYCTNIDKKVTQADVKLFFETVCGEVLRLRLLGDYHHSTRIAFVEFVMA 782
            SEDEREMCARTIYCTNIDKKVTQA+VKLFFE++CGEV RLRLLGDYHHSTRIAFVEFVMA
Sbjct: 264  SEDEREMCARTIYCTNIDKKVTQAEVKLFFESICGEVHRLRLLGDYHHSTRIAFVEFVMA 323

Query: 781  ESAIAALNCSGVVMGSLPIRISPSKTPVRQRVSRPAAH 668
            ESAIAALNCSG ++GSLPIR+SPSKTPVR R  RPA H
Sbjct: 324  ESAIAALNCSGAILGSLPIRVSPSKTPVRPRAPRPALH 361


>ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vitis vinifera]
          Length = 398

 Score =  380 bits (977), Expect = e-103
 Identities = 189/219 (86%), Positives = 202/219 (92%)
 Frame = -3

Query: 1324 GGNSARRKKIGNNHGKRRMNSRTSMAQREEVIKRTVYVSDIDHQVTEEQLAALFISCGQV 1145
            G  + RRKK     GKRRMNSRTSMAQREE+I+RTVYVSDID QVTEE+LAALFI+CGQV
Sbjct: 180  GQVNGRRKKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVTEEKLAALFITCGQV 239

Query: 1144 VDCRICGDPNSVLRFAFVEFTDEEGARNALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 965
            VDCR+CGDPNSVLRFAFVEFTDEEGAR ALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLP
Sbjct: 240  VDCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLP 299

Query: 964  RSEDEREMCARTIYCTNIDKKVTQADVKLFFETVCGEVLRLRLLGDYHHSTRIAFVEFVM 785
            R+EDEREMCARTIYCTNIDKKV+QADVKLFFE+VCGEV RLRLLGDYHHSTRIAFVEF+M
Sbjct: 300  RNEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIM 359

Query: 784  AESAIAALNCSGVVMGSLPIRISPSKTPVRQRVSRPAAH 668
            AESAIAALNCSGVV+GSLPIR+SPSKTPVR R  R   H
Sbjct: 360  AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPIH 398


>ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
            gi|223541913|gb|EEF43459.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 379

 Score =  378 bits (970), Expect = e-102
 Identities = 188/218 (86%), Positives = 202/218 (92%)
 Frame = -3

Query: 1321 GNSARRKKIGNNHGKRRMNSRTSMAQREEVIKRTVYVSDIDHQVTEEQLAALFISCGQVV 1142
            G++ARRKK   N GKRR+NSRTSMAQREE+I+RTVYVSDID QVTEEQLAALF+ CGQVV
Sbjct: 163  GSAARRKK-NYNQGKRRLNSRTSMAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVV 221

Query: 1141 DCRICGDPNSVLRFAFVEFTDEEGARNALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 962
            DCRICGDPNSVLRFAF+EFT EEGAR AL+LAGT+LG+YPVRVLPSKTAIAPVNPTFLPR
Sbjct: 222  DCRICGDPNSVLRFAFIEFTHEEGARAALNLAGTVLGYYPVRVLPSKTAIAPVNPTFLPR 281

Query: 961  SEDEREMCARTIYCTNIDKKVTQADVKLFFETVCGEVLRLRLLGDYHHSTRIAFVEFVMA 782
            S+DEREMC RTIYCTNIDKKVTQADVKLFFE+VCGEV RLRLLGDYHHSTRIAFVEFVMA
Sbjct: 282  SDDEREMCIRTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMA 341

Query: 781  ESAIAALNCSGVVMGSLPIRISPSKTPVRQRVSRPAAH 668
            ESAIAALNCSGVV+GSLPIR+SPSKTPVR R  R   H
Sbjct: 342  ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRIPMH 379


>emb|CBI34603.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score =  377 bits (967), Expect = e-102
 Identities = 186/213 (87%), Positives = 199/213 (93%)
 Frame = -3

Query: 1306 RKKIGNNHGKRRMNSRTSMAQREEVIKRTVYVSDIDHQVTEEQLAALFISCGQVVDCRIC 1127
            R+K     GKRRMNSRTSMAQREE+I+RTVYVSDID QVTEE+LAALFI+CGQVVDCR+C
Sbjct: 185  RRKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVTEEKLAALFITCGQVVDCRVC 244

Query: 1126 GDPNSVLRFAFVEFTDEEGARNALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 947
            GDPNSVLRFAFVEFTDEEGAR ALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPR+EDER
Sbjct: 245  GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRNEDER 304

Query: 946  EMCARTIYCTNIDKKVTQADVKLFFETVCGEVLRLRLLGDYHHSTRIAFVEFVMAESAIA 767
            EMCARTIYCTNIDKKV+QADVKLFFE+VCGEV RLRLLGDYHHSTRIAFVEF+MAESAIA
Sbjct: 305  EMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIMAESAIA 364

Query: 766  ALNCSGVVMGSLPIRISPSKTPVRQRVSRPAAH 668
            ALNCSGVV+GSLPIR+SPSKTPVR R  R   H
Sbjct: 365  ALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPIH 397


>ref|XP_002317806.1| predicted protein [Populus trichocarpa] gi|222858479|gb|EEE96026.1|
            predicted protein [Populus trichocarpa]
          Length = 293

 Score =  375 bits (964), Expect = e-101
 Identities = 183/215 (85%), Positives = 199/215 (92%)
 Frame = -3

Query: 1321 GNSARRKKIGNNHGKRRMNSRTSMAQREEVIKRTVYVSDIDHQVTEEQLAALFISCGQVV 1142
            G + RRKK   N G+RRMN+RTSMAQR+E+IKRTVYVSDID QVTEEQLA LFI CGQVV
Sbjct: 76   GQTNRRKKNSYNQGRRRMNNRTSMAQRDEIIKRTVYVSDIDQQVTEEQLAGLFIHCGQVV 135

Query: 1141 DCRICGDPNSVLRFAFVEFTDEEGARNALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 962
            DCRICGDPNSVLRFAFVEFTDEEGAR ALSL+GT+LGFYP+RVLPSKTAIAPVNPTFLPR
Sbjct: 136  DCRICGDPNSVLRFAFVEFTDEEGARTALSLSGTVLGFYPLRVLPSKTAIAPVNPTFLPR 195

Query: 961  SEDEREMCARTIYCTNIDKKVTQADVKLFFETVCGEVLRLRLLGDYHHSTRIAFVEFVMA 782
            SEDEREMCART+YCTNIDKK+TQADV+LFFE+ CGEV RLRLLGDYHHSTRIAFVEF +A
Sbjct: 196  SEDEREMCARTVYCTNIDKKITQADVRLFFESFCGEVHRLRLLGDYHHSTRIAFVEFAVA 255

Query: 781  ESAIAALNCSGVVMGSLPIRISPSKTPVRQRVSRP 677
            ESAIAALNCSG V+GSLPIR+SPSKTPVR R+ RP
Sbjct: 256  ESAIAALNCSGAVLGSLPIRVSPSKTPVRPRLPRP 290


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