BLASTX nr result

ID: Cnidium21_contig00012406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012406
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269159.1| PREDICTED: uncharacterized protein LOC100249...   152   5e-35
ref|XP_002309071.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|XP_002870957.1| AT5g02160 [Arabidopsis lyrata subsp. lyrata]...   142   5e-32
ref|NP_195836.5| uncharacterized protein [Arabidopsis thaliana] ...   141   1e-31
ref|XP_002531558.1| conserved hypothetical protein [Ricinus comm...   141   1e-31

>ref|XP_002269159.1| PREDICTED: uncharacterized protein LOC100249439 [Vitis vinifera]
           gi|147861902|emb|CAN82963.1| hypothetical protein
           VITISV_000344 [Vitis vinifera]
           gi|297740343|emb|CBI30525.3| unnamed protein product
           [Vitis vinifera]
          Length = 129

 Score =  152 bits (384), Expect = 5e-35
 Identities = 84/136 (61%), Positives = 95/136 (69%), Gaps = 2/136 (1%)
 Frame = -2

Query: 564 MASISPLQAIFSTNSAKQCGC--FGSRSTFLGSNVSLSRNRIDNRKKNRSSTVVAAVGDV 391
           M S++PL  +F  NS KQ     F +R T +GS VS        +KKNRS TVVAAVG+V
Sbjct: 1   MVSLAPLHTLFPGNSLKQSSLPGFYARPTPVGSAVSW-------KKKNRSLTVVAAVGEV 53

Query: 390 SAEGTVYLIXXXXXXXXXXXAFPILFSRKDLCPECDGAGFVRKGGAALRANAARKDQLQI 211
           S +GT+YLI           AFPI FSRKD+CPECDGAGFVR+ G ALRANAARKDQ QI
Sbjct: 54  STDGTIYLIAGAVAVTVLGTAFPIFFSRKDVCPECDGAGFVRQSGVALRANAARKDQAQI 113

Query: 210 VCANCNGLGKLNQVDK 163
           VCA CNGLGKLNQVDK
Sbjct: 114 VCARCNGLGKLNQVDK 129


>ref|XP_002309071.1| predicted protein [Populus trichocarpa] gi|222855047|gb|EEE92594.1|
           predicted protein [Populus trichocarpa]
          Length = 137

 Score =  144 bits (364), Expect = 1e-32
 Identities = 81/142 (57%), Positives = 93/142 (65%), Gaps = 8/142 (5%)
 Frame = -2

Query: 564 MASISPLQAIFSTNSAKQCGCFG--------SRSTFLGSNVSLSRNRIDNRKKNRSSTVV 409
           MA+++P+Q   S  S ++    G        + S FL  N+S  +N     K  RS TVV
Sbjct: 1   MATLTPIQTSLSRFSPQRWPVSGPGFSAAMPAGSKFLSWNISQKKN-----KNKRSLTVV 55

Query: 408 AAVGDVSAEGTVYLIXXXXXXXXXXXAFPILFSRKDLCPECDGAGFVRKGGAALRANAAR 229
           AAVGDVSA+GT YLI           AFPILFSRKDLCPECDGAGF+RK GA LRANAAR
Sbjct: 56  AAVGDVSADGTTYLIAGAAAVALLGTAFPILFSRKDLCPECDGAGFIRKSGATLRANAAR 115

Query: 228 KDQLQIVCANCNGLGKLNQVDK 163
           KDQ QIVC  CNGLGKLNQ+DK
Sbjct: 116 KDQAQIVCPRCNGLGKLNQIDK 137


>ref|XP_002870957.1| AT5g02160 [Arabidopsis lyrata subsp. lyrata]
           gi|297316794|gb|EFH47216.1| AT5g02160 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 130

 Score =  142 bits (358), Expect = 5e-32
 Identities = 81/136 (59%), Positives = 92/136 (67%), Gaps = 2/136 (1%)
 Frame = -2

Query: 564 MASISPLQAIF--STNSAKQCGCFGSRSTFLGSNVSLSRNRIDNRKKNRSSTVVAAVGDV 391
           MA    +Q  F  STN  K    +GS S+   +NV L +N     K++ SS VVAAVGDV
Sbjct: 1   MAIAPTMQTTFVSSTNFLKHSSSWGSSSS--PNNVILPKN-----KRSSSSVVVAAVGDV 53

Query: 390 SAEGTVYLIXXXXXXXXXXXAFPILFSRKDLCPECDGAGFVRKGGAALRANAARKDQLQI 211
           S++GT+YLI           AFPILF RKD CPECDGAGFVRKGG  LRANAARKD  QI
Sbjct: 54  SSDGTIYLIGGAIAVALVGTAFPILFKRKDTCPECDGAGFVRKGGVTLRANAARKDLPQI 113

Query: 210 VCANCNGLGKLNQVDK 163
           VCANCNGLGKLNQ+DK
Sbjct: 114 VCANCNGLGKLNQIDK 129


>ref|NP_195836.5| uncharacterized protein [Arabidopsis thaliana]
           gi|11762216|gb|AAG40386.1|AF325034_1 AT5g02160
           [Arabidopsis thaliana] gi|26452291|dbj|BAC43232.1|
           unknown protein [Arabidopsis thaliana]
           gi|60543355|gb|AAX22275.1| At5g02160 [Arabidopsis
           thaliana] gi|332003055|gb|AED90438.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 129

 Score =  141 bits (355), Expect = 1e-31
 Identities = 82/135 (60%), Positives = 93/135 (68%), Gaps = 3/135 (2%)
 Frame = -2

Query: 558 SISP-LQAIF--STNSAKQCGCFGSRSTFLGSNVSLSRNRIDNRKKNRSSTVVAAVGDVS 388
           +I+P LQ  F  STN  K    +GS S    +NV L +N     K++ SS VVAAVGDVS
Sbjct: 2   TIAPALQTTFVSSTNFLKHSSSWGSPSP---NNVILPKN-----KRSSSSVVVAAVGDVS 53

Query: 387 AEGTVYLIXXXXXXXXXXXAFPILFSRKDLCPECDGAGFVRKGGAALRANAARKDQLQIV 208
           ++GT+YLI           AFPILF RKD CPECDGAGFVRKGG  LRANAARKD  QIV
Sbjct: 54  SDGTIYLIGGAIAVALVGTAFPILFKRKDTCPECDGAGFVRKGGVTLRANAARKDLPQIV 113

Query: 207 CANCNGLGKLNQVDK 163
           CANCNGLGKLNQ+DK
Sbjct: 114 CANCNGLGKLNQIDK 128


>ref|XP_002531558.1| conserved hypothetical protein [Ricinus communis]
           gi|223528819|gb|EEF30824.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 134

 Score =  141 bits (355), Expect = 1e-31
 Identities = 80/137 (58%), Positives = 92/137 (67%), Gaps = 3/137 (2%)
 Frame = -2

Query: 564 MASISPLQAIFST--NSAKQCGCFGSRSTFLGSNVSLSRNRIDNRKKNRSSTVVAAVGDV 391
           MA+++ LQ  F+   ++    GC    S +L +  + S N      K RS TVVAA G+V
Sbjct: 2   MATLASLQTSFAAKMSAVPALGC----SLYLPARAAASWNCTQKNNKKRSLTVVAAFGEV 57

Query: 390 SAEGTVYLIXXXXXXXXXXXAFPILFSRKDLCPECDGAGFVRK-GGAALRANAARKDQLQ 214
           SA+GT YLI           AFPILFSRKDLCPECDGAGF+RK GG ALRANAARKDQ Q
Sbjct: 58  SADGTNYLIAGAAAVALIGTAFPILFSRKDLCPECDGAGFIRKSGGGALRANAARKDQAQ 117

Query: 213 IVCANCNGLGKLNQVDK 163
           IVC NCNGLGKLNQVDK
Sbjct: 118 IVCPNCNGLGKLNQVDK 134


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