BLASTX nr result

ID: Cnidium21_contig00012343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012343
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325157.1| predicted protein [Populus trichocarpa] gi|2...   191   2e-46
ref|XP_002264271.1| PREDICTED: uncharacterized protein LOC100256...   189   6e-46
gb|ADR71238.1| 30S ribosomal protein S6B [Hevea brasiliensis]         189   8e-46
gb|ADR71237.1| 30S ribosomal protein S6A [Hevea brasiliensis]         188   1e-45
ref|XP_002523537.1| structural constituent of ribosome, putative...   183   3e-44

>ref|XP_002325157.1| predicted protein [Populus trichocarpa] gi|222866591|gb|EEF03722.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  191 bits (485), Expect = 2e-46
 Identities = 87/120 (72%), Positives = 105/120 (87%), Gaps = 2/120 (1%)
 Frame = +3

Query: 30  MPLYDCMLLLKPHITRPDVMDLVSRVGKHIYQRNGVLTELKSMGTVQLGYGIRKLDGRHY 209
           MPLYDCML+LKPH+ +  +MDLV+RVGKH+Y RNGV+T++KS GTVQLGYGI+KLDGRHY
Sbjct: 1   MPLYDCMLMLKPHVRKEALMDLVARVGKHVYSRNGVVTDIKSFGTVQLGYGIKKLDGRHY 60

Query: 210 QGQLFQMTMMAPPSINKELHYLNKEDRLLRWLMVKHRDIKIGLDYLQED--TGRMELSKF 383
           QGQL Q+TMMA P+INKELHYLNKEDRLLRWL+VKHRDIK GL+++ ED   G  + S+F
Sbjct: 61  QGQLMQITMMATPNINKELHYLNKEDRLLRWLLVKHRDIKFGLEFMDEDDEDGEFDFSEF 120


>ref|XP_002264271.1| PREDICTED: uncharacterized protein LOC100256785 [Vitis vinifera]
          Length = 162

 Score =  189 bits (480), Expect = 6e-46
 Identities = 86/118 (72%), Positives = 103/118 (87%)
 Frame = +3

Query: 30  MPLYDCMLLLKPHITRPDVMDLVSRVGKHIYQRNGVLTELKSMGTVQLGYGIRKLDGRHY 209
           MP YDCMLLLKPH+ +  +MDLV+RVGKH+Y+RNGVLT++KS G V+LGYGI+KLDGR+Y
Sbjct: 1   MPFYDCMLLLKPHVNKESLMDLVARVGKHVYRRNGVLTDIKSFGIVRLGYGIKKLDGRYY 60

Query: 210 QGQLFQMTMMAPPSINKELHYLNKEDRLLRWLMVKHRDIKIGLDYLQEDTGRMELSKF 383
           QGQL QM+MMA P+ NKELHYLNKEDRLLRWL+VKHR+ K GL++L ED  R ELSKF
Sbjct: 61  QGQLMQMSMMATPNFNKELHYLNKEDRLLRWLLVKHRNTKYGLEFLNEDDVRSELSKF 118


>gb|ADR71238.1| 30S ribosomal protein S6B [Hevea brasiliensis]
          Length = 163

 Score =  189 bits (479), Expect = 8e-46
 Identities = 86/115 (74%), Positives = 102/115 (88%)
 Frame = +3

Query: 30  MPLYDCMLLLKPHITRPDVMDLVSRVGKHIYQRNGVLTELKSMGTVQLGYGIRKLDGRHY 209
           MPLYDCMLLLKPH+ +  +MDLV+RVGKH+Y RNGVLT++KS GT+QLGYGI+KLDGR+Y
Sbjct: 1   MPLYDCMLLLKPHVRKEALMDLVARVGKHVYARNGVLTDIKSFGTIQLGYGIKKLDGRYY 60

Query: 210 QGQLFQMTMMAPPSINKELHYLNKEDRLLRWLMVKHRDIKIGLDYLQEDTGRMEL 374
           QGQL QMTMMA P+INKELHYLNKEDRLLRWL+VKHRD   GL++L+ED  + EL
Sbjct: 61  QGQLMQMTMMATPNINKELHYLNKEDRLLRWLLVKHRDTTDGLEFLEEDNDKEEL 115


>gb|ADR71237.1| 30S ribosomal protein S6A [Hevea brasiliensis]
          Length = 163

 Score =  188 bits (478), Expect = 1e-45
 Identities = 86/115 (74%), Positives = 102/115 (88%)
 Frame = +3

Query: 30  MPLYDCMLLLKPHITRPDVMDLVSRVGKHIYQRNGVLTELKSMGTVQLGYGIRKLDGRHY 209
           MPLYDCMLLLKPH+ +  +MDLV+RVGKH+Y RNGVLT++KS GT+QLGYGI+KLDGR+Y
Sbjct: 1   MPLYDCMLLLKPHVRKEALMDLVARVGKHVYGRNGVLTDIKSFGTIQLGYGIKKLDGRYY 60

Query: 210 QGQLFQMTMMAPPSINKELHYLNKEDRLLRWLMVKHRDIKIGLDYLQEDTGRMEL 374
           QGQL QMTMMA P+INKELHYLNKEDRLLRWL+VKHRD   GL++L+ED  + EL
Sbjct: 61  QGQLMQMTMMATPNINKELHYLNKEDRLLRWLLVKHRDTTNGLEFLEEDNDKEEL 115


>ref|XP_002523537.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223537244|gb|EEF38876.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 162

 Score =  183 bits (465), Expect = 3e-44
 Identities = 84/117 (71%), Positives = 102/117 (87%)
 Frame = +3

Query: 30  MPLYDCMLLLKPHITRPDVMDLVSRVGKHIYQRNGVLTELKSMGTVQLGYGIRKLDGRHY 209
           MPLYDCMLLLKPHI +  V+DLV+RVGKH+  RNGVLT++KS GT+QLGYGI+K + R++
Sbjct: 1   MPLYDCMLLLKPHIHKEAVIDLVARVGKHVQSRNGVLTDMKSFGTIQLGYGIKKRENRYF 60

Query: 210 QGQLFQMTMMAPPSINKELHYLNKEDRLLRWLMVKHRDIKIGLDYLQEDTGRMELSK 380
           QGQL QMTMMA P+INKELHYLNKEDRLLRWL+VKHRD K GLD++ E+ G+ EL+K
Sbjct: 61  QGQLMQMTMMATPNINKELHYLNKEDRLLRWLLVKHRDTKYGLDFMDENDGKGELNK 117


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