BLASTX nr result

ID: Cnidium21_contig00012325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012325
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301234.1| predicted protein [Populus trichocarpa] gi|2...   148   2e-44
gb|ACV52576.1| ras-related GTP-binding protein [Nicotiana bentha...   147   2e-44
ref|XP_002326862.1| predicted protein [Populus trichocarpa] gi|1...   147   3e-44
gb|AFK44046.1| unknown [Lotus japonicus]                              146   7e-44
emb|CAA98159.1| RAB1B [Lotus japonicus]                               146   7e-44

>ref|XP_002301234.1| predicted protein [Populus trichocarpa] gi|222842960|gb|EEE80507.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  148 bits (374), Expect(2) = 2e-44
 Identities = 71/79 (89%), Positives = 75/79 (94%)
 Frame = +2

Query: 14  IQFWDTAGQERFRTITSSYYRGAHGIIVVYDLTDHESFNNVKQWLSEIDRYAIENVNKLL 193
           +Q WDTAGQERFRTITSSYYRGAHGIIVVYD+TD ESFNNVKQWL+EIDRYA +NVNKLL
Sbjct: 59  LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLL 118

Query: 194 VGNKSDLTANKVVSYEGAK 250
           VGNKSDLTANKVVSYE AK
Sbjct: 119 VGNKSDLTANKVVSYETAK 137



 Score = 56.2 bits (134), Expect(2) = 2e-44
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = +1

Query: 262 SQAFAIEIDIPFMEARAKDATNVEQAFMAMTSSIKESVELMPVL 393
           ++AFA EI IPFME  AKDATNVEQAFMAM ++IK+ +   P +
Sbjct: 136 AKAFADEIGIPFMETSAKDATNVEQAFMAMAAAIKDRMASQPAM 179


>gb|ACV52576.1| ras-related GTP-binding protein [Nicotiana benthamiana]
          Length = 131

 Score =  147 bits (372), Expect(2) = 2e-44
 Identities = 70/79 (88%), Positives = 75/79 (94%)
 Frame = +2

Query: 14  IQFWDTAGQERFRTITSSYYRGAHGIIVVYDLTDHESFNNVKQWLSEIDRYAIENVNKLL 193
           +Q WDTAGQERFRTITSSYYRGAHGIIVVYD+TD ESFNNVKQWLSEIDRYA +NVNK+L
Sbjct: 13  LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYASDNVNKIL 72

Query: 194 VGNKSDLTANKVVSYEGAK 250
           VGNKSDLTAN+VVSYE AK
Sbjct: 73  VGNKSDLTANRVVSYETAK 91



 Score = 56.6 bits (135), Expect(2) = 2e-44
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = +1

Query: 262 SQAFAIEIDIPFMEARAKDATNVEQAFMAMTSSIKESVELMP 387
           ++AFA EI IPF+E  AKDATNVEQAFMAMTS+IK  +   P
Sbjct: 90  AKAFADEIGIPFLETSAKDATNVEQAFMAMTSAIKNRMASQP 131


>ref|XP_002326862.1| predicted protein [Populus trichocarpa] gi|118483707|gb|ABK93747.1|
           unknown [Populus trichocarpa]
           gi|222835177|gb|EEE73612.1| predicted protein [Populus
           trichocarpa]
          Length = 203

 Score =  147 bits (371), Expect(2) = 3e-44
 Identities = 70/79 (88%), Positives = 75/79 (94%)
 Frame = +2

Query: 14  IQFWDTAGQERFRTITSSYYRGAHGIIVVYDLTDHESFNNVKQWLSEIDRYAIENVNKLL 193
           +Q WDTAGQERFRTITSSYYRGAHGIIVVYD+TD ESFNNVKQWL+EIDRYA +NVNKLL
Sbjct: 59  LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLL 118

Query: 194 VGNKSDLTANKVVSYEGAK 250
           VGNKSDLT+NKVVSYE AK
Sbjct: 119 VGNKSDLTSNKVVSYEQAK 137



 Score = 56.6 bits (135), Expect(2) = 3e-44
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = +1

Query: 262 SQAFAIEIDIPFMEARAKDATNVEQAFMAMTSSIKESVELMPVL 393
           ++AFA EI IPFME  AKDATNVEQAFMAM+++IK+ +   P +
Sbjct: 136 AKAFADEIGIPFMETSAKDATNVEQAFMAMSAAIKDRMASQPAM 179


>gb|AFK44046.1| unknown [Lotus japonicus]
          Length = 202

 Score =  146 bits (369), Expect(2) = 7e-44
 Identities = 69/79 (87%), Positives = 74/79 (93%)
 Frame = +2

Query: 14  IQFWDTAGQERFRTITSSYYRGAHGIIVVYDLTDHESFNNVKQWLSEIDRYAIENVNKLL 193
           +Q WDTAGQERFRTITSSYYRGAHGII+VYD+TD ESFNNVKQWLSEIDRYA +NVNKLL
Sbjct: 59  LQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLL 118

Query: 194 VGNKSDLTANKVVSYEGAK 250
           VGNKSDLTAN+ VSYE AK
Sbjct: 119 VGNKSDLTANRAVSYETAK 137



 Score = 56.2 bits (134), Expect(2) = 7e-44
 Identities = 30/49 (61%), Positives = 35/49 (71%)
 Frame = +1

Query: 241 RSQSKLHSQAFAIEIDIPFMEARAKDATNVEQAFMAMTSSIKESVELMP 387
           R+ S   ++AFA EI IPFME  AKDATNVEQAFMAM +SIK  +   P
Sbjct: 129 RAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKNRMASQP 177


>emb|CAA98159.1| RAB1B [Lotus japonicus]
          Length = 194

 Score =  146 bits (369), Expect(2) = 7e-44
 Identities = 69/79 (87%), Positives = 74/79 (93%)
 Frame = +2

Query: 14  IQFWDTAGQERFRTITSSYYRGAHGIIVVYDLTDHESFNNVKQWLSEIDRYAIENVNKLL 193
           +Q WDTAGQERFRTITSSYYRGAHGII+VYD+TD ESFNNVKQWLSEIDRYA +NVNKLL
Sbjct: 51  LQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLL 110

Query: 194 VGNKSDLTANKVVSYEGAK 250
           VGNKSDLTAN+ VSYE AK
Sbjct: 111 VGNKSDLTANRAVSYETAK 129



 Score = 56.2 bits (134), Expect(2) = 7e-44
 Identities = 30/49 (61%), Positives = 35/49 (71%)
 Frame = +1

Query: 241 RSQSKLHSQAFAIEIDIPFMEARAKDATNVEQAFMAMTSSIKESVELMP 387
           R+ S   ++AFA EI IPFME  AKDATNVEQAFMAM +SIK  +   P
Sbjct: 121 RAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKNRMASQP 169


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