BLASTX nr result

ID: Cnidium21_contig00012320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012320
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA40444.1| ubiquitin-conjugating enzyme family protein-like ...   280   5e-73
gb|ACF06539.1| ubiquitin-conjugating enzyme family protein [Elae...   278   1e-72
ref|XP_002323400.1| predicted protein [Populus trichocarpa] gi|1...   278   1e-72
gb|ADU56174.1| ubiquitin-conjugating family protein [Jatropha cu...   277   3e-72
ref|XP_004136503.1| PREDICTED: ubiquitin-conjugating enzyme E2 v...   276   4e-72

>gb|ABA40444.1| ubiquitin-conjugating enzyme family protein-like protein [Solanum
           tuberosum] gi|78191460|gb|ABB29951.1|
           ubiquitin-conjugating enzyme family protein-like
           [Solanum tuberosum]
          Length = 146

 Score =  280 bits (715), Expect = 5e-73
 Identities = 130/146 (89%), Positives = 137/146 (93%)
 Frame = +3

Query: 204 MTLGSGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNSV 383
           MTLGSGGSSVVVPRNFR      RGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNSV
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNSV 60

Query: 384 HEGRIYQLKLFCDKDYPEKPPTVRFHSRINLTCVHHETGVVEVKKFGILSNWQREYTMED 563
           HEGRIYQLKLFCDKDYPEKPP+VRFHSR+N+TCV+HETGVVE KKF +LSNWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFALLSNWQREYTMED 120

Query: 564 ILIQLKKEMAAPYNRKLVQPPEGTCF 641
           IL QLKKEMA+P+NRKLVQPPEGTCF
Sbjct: 121 ILTQLKKEMASPHNRKLVQPPEGTCF 146


>gb|ACF06539.1| ubiquitin-conjugating enzyme family protein [Elaeis guineensis]
          Length = 146

 Score =  278 bits (712), Expect = 1e-72
 Identities = 131/146 (89%), Positives = 137/146 (93%)
 Frame = +3

Query: 204 MTLGSGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNSV 383
           MT+GSGGSSVVVPRNFR      RGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNSV
Sbjct: 1   MTIGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNSV 60

Query: 384 HEGRIYQLKLFCDKDYPEKPPTVRFHSRINLTCVHHETGVVEVKKFGILSNWQREYTMED 563
           HEGRIYQLKLFCDKDYPEKPP VRFHSRIN+TCV+HETGVVE KKFGIL+NWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPGVRFHSRINMTCVNHETGVVEPKKFGILANWQREYTMED 120

Query: 564 ILIQLKKEMAAPYNRKLVQPPEGTCF 641
           IL+QLKKEMAAP+NRKLVQPPEGT F
Sbjct: 121 ILVQLKKEMAAPHNRKLVQPPEGTFF 146


>ref|XP_002323400.1| predicted protein [Populus trichocarpa] gi|118483820|gb|ABK93802.1|
           unknown [Populus trichocarpa]
           gi|222868030|gb|EEF05161.1| predicted protein [Populus
           trichocarpa]
          Length = 146

 Score =  278 bits (711), Expect = 1e-72
 Identities = 129/146 (88%), Positives = 136/146 (93%)
 Frame = +3

Query: 204 MTLGSGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNSV 383
           MT GSGGSSVVVPRNFR      RGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHN+V
Sbjct: 1   MTFGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 384 HEGRIYQLKLFCDKDYPEKPPTVRFHSRINLTCVHHETGVVEVKKFGILSNWQREYTMED 563
           HEGRIYQLKLFCDKDYPEKPP+VRFHSRIN+TCV+HETGVVE KKFG+L+NWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMED 120

Query: 564 ILIQLKKEMAAPYNRKLVQPPEGTCF 641
           IL QLKKEMA P+NRKLVQPPEGTCF
Sbjct: 121 ILTQLKKEMAVPHNRKLVQPPEGTCF 146


>gb|ADU56174.1| ubiquitin-conjugating family protein [Jatropha curcas]
           gi|317159571|gb|ADV04060.1| protein
           binding/ubiquitin-protein ligase 1 [Hevea brasiliensis]
          Length = 146

 Score =  277 bits (708), Expect = 3e-72
 Identities = 130/146 (89%), Positives = 137/146 (93%)
 Frame = +3

Query: 204 MTLGSGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNSV 383
           MTLGSGGSSVVVPRNFR      RGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHN+V
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 384 HEGRIYQLKLFCDKDYPEKPPTVRFHSRINLTCVHHETGVVEVKKFGILSNWQREYTMED 563
           HEGRIYQLKLFCDKDYPEKPP+VRFHSRIN+TCV+HETGVVE KKFG+L+NWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMED 120

Query: 564 ILIQLKKEMAAPYNRKLVQPPEGTCF 641
           IL QLKKEMAAP+NRKLVQPPEGT F
Sbjct: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 146


>ref|XP_004136503.1| PREDICTED: ubiquitin-conjugating enzyme E2 variant 1C-like [Cucumis
           sativus] gi|449526672|ref|XP_004170337.1| PREDICTED:
           ubiquitin-conjugating enzyme E2 variant 1C-like [Cucumis
           sativus]
          Length = 146

 Score =  276 bits (707), Expect = 4e-72
 Identities = 129/146 (88%), Positives = 137/146 (93%)
 Frame = +3

Query: 204 MTLGSGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNSV 383
           MTLGSGGSSVVVPRNFR      RGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHN+V
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 384 HEGRIYQLKLFCDKDYPEKPPTVRFHSRINLTCVHHETGVVEVKKFGILSNWQREYTMED 563
           HEGRIYQLKLFCDKDYPEKPP+VRFHSR+N+TCV+HETGVVE KKFG+L+NWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120

Query: 564 ILIQLKKEMAAPYNRKLVQPPEGTCF 641
           IL QLKKEMAAP+NRKLVQPPEGT F
Sbjct: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 146


Top