BLASTX nr result
ID: Cnidium21_contig00012310
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00012310 (258 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFW90583.1| 60S ribosomal protein L4/L1 [Solanum tuberosum] 150 8e-35 ref|XP_002882630.1| 60S ribosomal protein L4/L1 [Arabidopsis lyr... 149 2e-34 ref|XP_002870995.1| 60S ribosomal protein L4/L1 [Arabidopsis lyr... 147 7e-34 gb|AFX67037.1| 60S ribosomal protein L1 [Solanum tuberosum] 147 1e-33 gb|ABB16969.1| unknown [Solanum tuberosum] 147 1e-33 >gb|AFW90583.1| 60S ribosomal protein L4/L1 [Solanum tuberosum] Length = 295 Score = 150 bits (380), Expect = 8e-35 Identities = 73/85 (85%), Positives = 81/85 (95%) Frame = +3 Query: 3 GHKIDNVPELPLVVSDSIESLEKTSNAIKALKEFGAYQDAEKAKDSIGIRPGKGKMRNRR 182 GH+I++VPELPLVVSDS+ES+EKTSNAIKALK+ GAY DAEKAKDS IRPGKGKMRNRR Sbjct: 149 GHRIESVPELPLVVSDSVESIEKTSNAIKALKQIGAYADAEKAKDSHAIRPGKGKMRNRR 208 Query: 183 YISRKGPLIVYGTEGAKLVKSFRNI 257 YISRKGPLIVYGTEGAKLVK+FRN+ Sbjct: 209 YISRKGPLIVYGTEGAKLVKAFRNL 233 >ref|XP_002882630.1| 60S ribosomal protein L4/L1 [Arabidopsis lyrata subsp. lyrata] gi|297328470|gb|EFH58889.1| 60S ribosomal protein L4/L1 [Arabidopsis lyrata subsp. lyrata] Length = 406 Score = 149 bits (377), Expect = 2e-34 Identities = 71/85 (83%), Positives = 80/85 (94%) Frame = +3 Query: 3 GHKIDNVPELPLVVSDSIESLEKTSNAIKALKEFGAYQDAEKAKDSIGIRPGKGKMRNRR 182 GHKI+NVPE+PLVVSDS E++EKTS AIK LK+ GAY DAEKAKDSIGIRPGKGKMRNRR Sbjct: 146 GHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAYDDAEKAKDSIGIRPGKGKMRNRR 205 Query: 183 YISRKGPLIVYGTEGAKLVKSFRNI 257 YISRKGPL+VYGTEGAK+VK+FRN+ Sbjct: 206 YISRKGPLVVYGTEGAKIVKAFRNL 230 >ref|XP_002870995.1| 60S ribosomal protein L4/L1 [Arabidopsis lyrata subsp. lyrata] gi|297316832|gb|EFH47254.1| 60S ribosomal protein L4/L1 [Arabidopsis lyrata subsp. lyrata] Length = 407 Score = 147 bits (372), Expect = 7e-34 Identities = 70/85 (82%), Positives = 80/85 (94%) Frame = +3 Query: 3 GHKIDNVPELPLVVSDSIESLEKTSNAIKALKEFGAYQDAEKAKDSIGIRPGKGKMRNRR 182 GHKI+NVPE+PLVVSDS E++EKTS AIK LK+ GAY DAEKAK+SIGIRPGKGKMRNRR Sbjct: 147 GHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAYDDAEKAKNSIGIRPGKGKMRNRR 206 Query: 183 YISRKGPLIVYGTEGAKLVKSFRNI 257 YISRKGPL+VYGTEGAK+VK+FRN+ Sbjct: 207 YISRKGPLVVYGTEGAKIVKAFRNL 231 >gb|AFX67037.1| 60S ribosomal protein L1 [Solanum tuberosum] Length = 407 Score = 147 bits (370), Expect = 1e-33 Identities = 73/85 (85%), Positives = 79/85 (92%) Frame = +3 Query: 3 GHKIDNVPELPLVVSDSIESLEKTSNAIKALKEFGAYQDAEKAKDSIGIRPGKGKMRNRR 182 GH+I++VPELPLVVSDSIE +EKTSNAIKALK+ GAY DAEKAKDS IR GKGKMRNRR Sbjct: 147 GHRIESVPELPLVVSDSIEGIEKTSNAIKALKQVGAYPDAEKAKDSHAIRTGKGKMRNRR 206 Query: 183 YISRKGPLIVYGTEGAKLVKSFRNI 257 YISRKGPLIVYGTEGAKLVK+FRNI Sbjct: 207 YISRKGPLIVYGTEGAKLVKAFRNI 231 >gb|ABB16969.1| unknown [Solanum tuberosum] Length = 405 Score = 147 bits (370), Expect = 1e-33 Identities = 72/85 (84%), Positives = 79/85 (92%) Frame = +3 Query: 3 GHKIDNVPELPLVVSDSIESLEKTSNAIKALKEFGAYQDAEKAKDSIGIRPGKGKMRNRR 182 GH+I++VPELPLV+SDSIE +EKTSNAIKALK+ GAY DAEKAKDS IR GKGKMRNRR Sbjct: 144 GHRIESVPELPLVISDSIEGIEKTSNAIKALKQIGAYPDAEKAKDSHAIRQGKGKMRNRR 203 Query: 183 YISRKGPLIVYGTEGAKLVKSFRNI 257 YISRKGPLIVYGTEGAKLVK+FRNI Sbjct: 204 YISRKGPLIVYGTEGAKLVKAFRNI 228