BLASTX nr result

ID: Cnidium21_contig00012296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012296
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517583.1| conserved hypothetical protein [Ricinus comm...   240   3e-61
emb|CBI36264.3| unnamed protein product [Vitis vinifera]              231   1e-58
ref|XP_003533062.1| PREDICTED: WD repeat-containing protein 43-l...   224   2e-56
ref|XP_004136081.1| PREDICTED: WD repeat-containing protein 43-l...   216   5e-54
ref|XP_003529814.1| PREDICTED: WD repeat-containing protein 43-l...   212   9e-53

>ref|XP_002517583.1| conserved hypothetical protein [Ricinus communis]
           gi|223543215|gb|EEF44747.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 634

 Score =  240 bits (612), Expect = 3e-61
 Identities = 130/272 (47%), Positives = 171/272 (62%), Gaps = 4/272 (1%)
 Frame = -3

Query: 805 MAKQNHQKSAITSFTSRGDYLAILYPQALLKVWNTLDGSLFAEWKPSDGNDNYMFSSMTC 626
           MAK+   KS IT+FTS GD+LAILYP   +K+W+T +GSL AEWK SD +D+  +S M C
Sbjct: 1   MAKEK-LKSLITAFTSDGDFLAILYPTGSIKIWSTGNGSLLAEWKQSD-DDSVSYSCMAC 58

Query: 625 IYTGKKRKPKKGTFLVALGTDNGDVMVIDIVPAEMKWKLSACLPGGIISLSFSNDGSKLH 446
            + GKKRK +  TFL+ALGT  GD++  D    +MKWK S   PGG+I L+F+N G  L 
Sbjct: 59  SFVGKKRKQEHSTFLLALGTHGGDILATDAFTGDMKWKSSGHHPGGVIGLAFANKGRSLR 118

Query: 445 AVSAKGMLSEMNSKSGELFKVLELSKEAIISSSF-CDEKILAATTSHVRVFGLEDGNELV 269
           +V   G  SEMNSKSGEL    + SK  I S +F  DE++LAA +S  R+  L +G EL 
Sbjct: 119 SVGTNGKASEMNSKSGELTVEFKASKRPISSLAFSSDEEVLAAVSSRARLLSLVNGKELF 178

Query: 268 KLPDDLGSVRHISVSDDAKAIITSDLDKKHLQMWRCEWSTGIVNTGPVLFMKSHPLNVEC 89
           K PDDLG+V+HIS+S  AK I+T+   +K L +WRC  S+  ++ GPVL M+  PL +EC
Sbjct: 179 KFPDDLGTVQHISISKSAKNIVTTGFGEKILHLWRCNLSSKSLSAGPVLSMRHPPLVIEC 238

Query: 88  KK---GLSEDXXXXXXXXXXXVTYIWNLNMSA 2
           K       ED           V Y+WNL  S+
Sbjct: 239 KSTGDEKEEDGLIVLSVSESGVVYVWNLKTSS 270


>emb|CBI36264.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  231 bits (589), Expect = 1e-58
 Identities = 123/271 (45%), Positives = 170/271 (62%), Gaps = 3/271 (1%)
 Frame = -3

Query: 805 MAKQNHQKSAITSFTSRGDYLAILYPQALLKVWNTLDGSLFAEWKPSDGNDNYMFSSMTC 626
           MA++   K  ++SFT  GD+LAIL P   +K+WNT   SL AEWK  D +    +S MTC
Sbjct: 1   MAREKKLKPVVSSFTPDGDFLAILSPDGTVKIWNTSYQSLVAEWKGPDVDSGIGYSCMTC 60

Query: 625 IYTGKKRKPKKGT-FLVALGTDNGDVMVIDIVPAEMKWKLSACLPGGIISLSFSNDGSKL 449
            + GKKR+ ++G   L+AL T++G+++V+DI   EMKW+ S   PGGI+ LSF+N G  L
Sbjct: 61  SFVGKKRRKERGACLLLALVTNDGNILVVDIFAGEMKWESSRYHPGGIVGLSFANKGRIL 120

Query: 448 HAVSAKGMLSEMNSKSGELFKVLELSKEAIISSSFC-DEKILAATTSHVRVFGLEDGNEL 272
           H V   GM+S + S++GEL    + SK+ I S +F  DEKILA   S +RV  LE+G EL
Sbjct: 121 HVVGTNGMVSTLKSENGELIGEFKASKKPISSLAFSSDEKILAIAGSKIRVLSLENGKEL 180

Query: 271 VKLPDDLGSVRHISVSDDAKAIITSDLDKKHLQMWRCEWSTGIVNTGPVLFMKSHPLNVE 92
           +K PDDL SV+ I +S+DA  I+TS   +KHLQ+W C+ +   V+ GPVL MK  P+  E
Sbjct: 181 LKFPDDLESVQSIWISNDANTIVTSGFGEKHLQVWNCDLNRKTVSKGPVLSMKHPPVVFE 240

Query: 91  CKKGLSEDXXXXXXXXXXXVT-YIWNLNMSA 2
           CK G +ED            T Y+WNL  ++
Sbjct: 241 CKHGWNEDDGLVILSVSSSGTAYLWNLKTTS 271


>ref|XP_003533062.1| PREDICTED: WD repeat-containing protein 43-like [Glycine max]
          Length = 620

 Score =  224 bits (570), Expect = 2e-56
 Identities = 113/269 (42%), Positives = 169/269 (62%), Gaps = 1/269 (0%)
 Frame = -3

Query: 805 MAKQNHQKSAITSFTSRGDYLAILYPQALLKVWNTLDGSLFAEWKPSDGNDNYMFSSMTC 626
           M K   +K  +T+FT  GDY+AIL    + K+WNT  G L AEWKPSDG+ +  +S + C
Sbjct: 1   MVKDKLKKHVLTAFTPNGDYVAILSANEVAKIWNTNTGHLLAEWKPSDGDHDIRYSCIAC 60

Query: 625 IYTGKKRKPKKGTFLVALGTDNGDVMVIDIVPAEMKWKLSACLPGGIISLSFSNDGSKLH 446
            + GKKR+ ++GT L+ALGT +G V+ +D+   E K  L+   PGGI  LSF+N G  L 
Sbjct: 61  SFIGKKRRKEQGTCLLALGTIDGSVLAVDVSTGERK--LTTSHPGGICGLSFANKGRLLR 118

Query: 445 AVSAKGMLSEMNSKSGELFKVLELSKEAIISSSFC-DEKILAATTSHVRVFGLEDGNELV 269
            V   G+   +N+++GEL K  +++K++I S +F  DEK LA  +S  RV   E G E++
Sbjct: 119 IVGHNGVAYGVNTETGELLKEFKITKKSITSLAFSNDEKYLAIVSSRPRVISWEIGEEIL 178

Query: 268 KLPDDLGSVRHISVSDDAKAIITSDLDKKHLQMWRCEWSTGIVNTGPVLFMKSHPLNVEC 89
           K P+DLG+V HIS+S DAK ++TSD + KHLQ+W+C+ ++G +  GP L ++  PL ++C
Sbjct: 179 KFPNDLGNVEHISISSDAKNLVTSDFEGKHLQVWKCDLNSGNLCRGPTLPIRHPPLVLDC 238

Query: 88  KKGLSEDXXXXXXXXXXXVTYIWNLNMSA 2
             G +++             YIWNL+ S+
Sbjct: 239 HSGCNKEDVVVLAVTGRGSAYIWNLSASS 267


>ref|XP_004136081.1| PREDICTED: WD repeat-containing protein 43-like [Cucumis sativus]
           gi|449491125|ref|XP_004158808.1| PREDICTED: WD
           repeat-containing protein 43-like [Cucumis sativus]
          Length = 624

 Score =  216 bits (550), Expect = 5e-54
 Identities = 111/258 (43%), Positives = 157/258 (60%), Gaps = 2/258 (0%)
 Frame = -3

Query: 775 ITSFTSRGDYLAILYPQALLKVWNTLDGSLFAEWKPSDGNDNYMFSSMTCIYTGKKRKPK 596
           I +FT  GDYLAI+     LK+W+T DGSL AEWK  DG +++ +S M C + GKKRK  
Sbjct: 11  IAAFTPDGDYLAIVSSNGTLKIWSTRDGSLLAEWKDLDGKNDFGYSCMACCFLGKKRK-- 68

Query: 595 KGTFLVALGTDNGDVMVIDIVPAEMKWKLSACLPGGIISLSFSNDGSKLHAVSAKGMLSE 416
               +VA+GT++GDV+ ++    E KW  + C PGG+I LSF+N G +L  V + GM SE
Sbjct: 69  SSYCVVAIGTNSGDVLAVNASNGEKKWVSAGCHPGGVIGLSFANKGCRLRTVGSNGMASE 128

Query: 415 MNSKSGELFKVLELSKEAIISSSFC-DEKILAATTSHVRVFGLEDGNELVKLPDDLGSVR 239
           M++++G + K  + SK++I SS+F  DE+ L      +++   +DG+EL+  PD LG V+
Sbjct: 129 MDTETGNIIKEFKASKKSISSSAFSLDERYLVVAGKKLKILSTDDGDELIVHPDKLGPVK 188

Query: 238 HISVSDDAKAIITSDLDKKHLQMWRCEWSTGIVNTGPVLFMKSHPLNVECKK-GLSEDXX 62
            +SVSDDAK IITS+L  KHLQ+W C  S G  + GP+L MK  P   EC+     ED  
Sbjct: 189 LVSVSDDAKTIITSELGAKHLQVWWCNISAGKFSRGPILSMKHPPFVSECRNVSNQEDSV 248

Query: 61  XXXXXXXXXVTYIWNLNM 8
                      Y+W L +
Sbjct: 249 VVLSVSVSGAAYLWKLKV 266


>ref|XP_003529814.1| PREDICTED: WD repeat-containing protein 43-like [Glycine max]
          Length = 622

 Score =  212 bits (539), Expect = 9e-53
 Identities = 108/269 (40%), Positives = 166/269 (61%), Gaps = 1/269 (0%)
 Frame = -3

Query: 805 MAKQNHQKSAITSFTSRGDYLAILYPQALLKVWNTLDGSLFAEWKPSDGNDNYMFSSMTC 626
           M K   +K  +T+FT   D +AIL    + K+WNT  G L AEWKPS G+ +  +S + C
Sbjct: 1   MVKDKLKKHVLTAFTPNEDSVAILSANEVAKIWNTNTGHLLAEWKPSKGDHDIHYSCIAC 60

Query: 625 IYTGKKRKPKKGTFLVALGTDNGDVMVIDIVPAEMKWKLSACLPGGIISLSFSNDGSKLH 446
            + G+K + ++GT L+AL T +G V+ +D+   E K  L+   PGGI  LSF+N G  L 
Sbjct: 61  SFIGEKHRKEQGTSLLALSTIDGSVIAVDVSTGERK--LTTSHPGGICGLSFANKGRLLR 118

Query: 445 AVSAKGMLSEMNSKSGELFKVLELSKEAIISSSFC-DEKILAATTSHVRVFGLEDGNELV 269
            V   G+  E+N+++GE+ K  ++SK++I S +F  DEK LA  +S +R+   E G E++
Sbjct: 119 IVGHNGVAYEVNTETGEVLKEFKISKKSITSLAFSNDEKYLAIVSSRLRIISWEIGKEIL 178

Query: 268 KLPDDLGSVRHISVSDDAKAIITSDLDKKHLQMWRCEWSTGIVNTGPVLFMKSHPLNVEC 89
           K P+DLG+V+ IS+S DAK ++TSD + KHLQ+W+C+ ++G V  GP L ++  PL ++C
Sbjct: 179 KFPNDLGNVQLISISSDAKNLVTSDFEGKHLQVWKCDLNSGNVGRGPTLPIRHPPLILDC 238

Query: 88  KKGLSEDXXXXXXXXXXXVTYIWNLNMSA 2
             G +++             YIWNLN S+
Sbjct: 239 HSGCNKEDVVVLAVTGRGSAYIWNLNASS 267


Top