BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012230
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, p...    67   2e-09
ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation spec...    61   8e-08
ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycin...    61   8e-08
ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation spec...    60   2e-07
emb|CBI27869.3| unnamed protein product [Vitis vinifera]               60   2e-07

>ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223546548|gb|EEF48046.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 214

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/76 (48%), Positives = 50/76 (65%)
 Frame = -1

Query: 239 DNSQLLNNTHGSSASTDDGSEVEAIKIYGLSNYYFYSKPAPPLKNQTLEERVSCLKTRYD 60
           D+  ++NN H   AS D G  ++   IY LS YYF SK   P +++TL +RV  +K+ Y 
Sbjct: 3   DHEVVVNNNH-HEASRDQGFVLD---IYPLSRYYFGSKDPLPFRDETLVDRVQRMKSNYL 58

Query: 59  VYGMRTCVEAVILVEL 12
            +G+RTCVEAVILVEL
Sbjct: 59  AHGLRTCVEAVILVEL 74


>ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449488056|ref|XP_004157928.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 217

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
 Frame = -1

Query: 191 DDGS---EVEAIKIYGLSNYYFYSKPAPPLKNQTLEERVSCLKTRYDVYGMRTCVEAVIL 21
           DD S   ++  I IY LSNYYF SK     K++TL +RV  +K+ Y  +G+RTCVEAV+L
Sbjct: 13  DDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVML 72

Query: 20  VEL 12
           VEL
Sbjct: 73  VEL 75


>ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycine max]
           gi|255640824|gb|ACU20695.1| unknown [Glycine max]
          Length = 216

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/67 (50%), Positives = 44/67 (65%)
 Frame = -1

Query: 212 HGSSASTDDGSEVEAIKIYGLSNYYFYSKPAPPLKNQTLEERVSCLKTRYDVYGMRTCVE 33
           H +S + D   E +   IY LS+YYF SK A P K+ TL +RV  +K+ Y   G+RTCVE
Sbjct: 16  HPNSGNDDQSLEFD---IYPLSSYYFGSKDAVPSKDLTLVDRVLRMKSNYAASGIRTCVE 72

Query: 32  AVILVEL 12
           AV+LVEL
Sbjct: 73  AVLLVEL 79


>ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Vitis vinifera]
          Length = 284

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/75 (45%), Positives = 46/75 (61%)
 Frame = -1

Query: 236 NSQLLNNTHGSSASTDDGSEVEAIKIYGLSNYYFYSKPAPPLKNQTLEERVSCLKTRYDV 57
           N ++ ++  G  +S+ D S    + IY LS YYF SK    LK +TL +R+  +K+ Y  
Sbjct: 69  NYEMGSSADGDRSSSGDSSN-HVLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSR 127

Query: 56  YGMRTCVEAVILVEL 12
           YG RTCV AVILVEL
Sbjct: 128 YGSRTCVVAVILVEL 142


>emb|CBI27869.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/75 (45%), Positives = 46/75 (61%)
 Frame = -1

Query: 236 NSQLLNNTHGSSASTDDGSEVEAIKIYGLSNYYFYSKPAPPLKNQTLEERVSCLKTRYDV 57
           N ++ ++  G  +S+ D S    + IY LS YYF SK    LK +TL +R+  +K+ Y  
Sbjct: 76  NYEMGSSADGDRSSSGDSSN-HVLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSR 134

Query: 56  YGMRTCVEAVILVEL 12
           YG RTCV AVILVEL
Sbjct: 135 YGSRTCVVAVILVEL 149