BLASTX nr result

ID: Cnidium21_contig00012213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012213
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333320.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002305396.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_002882204.1| hypothetical protein ARALYDRAFT_477435 [Arab...    82   4e-14
ref|XP_003554910.1| PREDICTED: uncharacterized protein LOC100797...    82   6e-14
ref|XP_004141464.1| PREDICTED: uncharacterized protein LOC101204...    79   5e-13

>ref|XP_002333320.1| predicted protein [Populus trichocarpa] gi|222835946|gb|EEE74367.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 64/154 (41%), Positives = 81/154 (52%), Gaps = 25/154 (16%)
 Frame = -3

Query: 388 SKIRERRFVVAXXXXXXXXXXXXXXXXXXSGKSK------KCACVAYESLRASQEGFFRN 227
           +KIRERRFVVA                    K +      KC CVAYE+LRASQE FF+N
Sbjct: 73  NKIRERRFVVAKKKSKKGALNSNTTPVDCKCKERYGDNVNKCLCVAYETLRASQEEFFKN 132

Query: 226 SKNVRDC----------YK-----DENQIRXXXXXXEAINSIDRDANLD----ESEVTGE 104
             +V +           YK     +E +I         +   DRD +      ESE +G+
Sbjct: 133 KNDVEEKGETDKEKAFDYKAMTEFEEEEIENHFAAQN-LEIEDRDGSDTQYSCESEKSGQ 191

Query: 103 IGSATLKRRRDKLLEDARRSVPESGRVMHLVKAF 2
           +GS+T+KRRRDKLLEDAR S P+SG+V HLV AF
Sbjct: 192 MGSSTIKRRRDKLLEDARNSAPDSGKVKHLVDAF 225


>ref|XP_002305396.1| predicted protein [Populus trichocarpa] gi|222848360|gb|EEE85907.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 57/140 (40%), Positives = 78/140 (55%), Gaps = 12/140 (8%)
 Frame = -3

Query: 385 KIRERRFVVAXXXXXXXXXXXXXXXXXXS------GKSKKCACVAYESLRASQEGFFRNS 224
           KIRERRFVVA                         G  KKC C+AYE+LRASQE FF+N 
Sbjct: 71  KIRERRFVVAKKNSKKETLNSNPTTVDCKCKERYGGSVKKCLCLAYETLRASQEEFFKNK 130

Query: 223 KNV--RDCYKDENQIRXXXXXXEAINSIDRDAN----LDESEVTGEIGSATLKRRRDKLL 62
            +V  +D   D+N           ++  DR+ +      E E +G++GS+ +KRRR+KLL
Sbjct: 131 NDVEEKDHLMDQN-----------LDIEDREGSDAQYSCEIEKSGQMGSSKIKRRRNKLL 179

Query: 61  EDARRSVPESGRVMHLVKAF 2
           E+AR S P++G+V HLV+AF
Sbjct: 180 EEARDSAPDNGKVKHLVEAF 199


>ref|XP_002882204.1| hypothetical protein ARALYDRAFT_477435 [Arabidopsis lyrata subsp.
           lyrata] gi|297328044|gb|EFH58463.1| hypothetical protein
           ARALYDRAFT_477435 [Arabidopsis lyrata subsp. lyrata]
          Length = 479

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 52/133 (39%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
 Frame = -3

Query: 388 SKIRERRFVVAXXXXXXXXXXXXXXXXXXSGKS----KKCACVAYESLRASQEGFFRNSK 221
           ++IRERRFVV                     K+    KKC C+AYE+LRASQE FF N +
Sbjct: 63  NRIRERRFVVVKKNSRKEKKDSGSVDCKCGAKTNSNMKKCVCIAYETLRASQEEFFNNRR 122

Query: 220 NVRDCYKDENQIRXXXXXXEAINSIDRDANLDESEVTGEIGSATLKRRRDKLLEDARRSV 41
                  + +Q           N  D D  ++  + + EI  +++KRRR+K+LE+AR S+
Sbjct: 123 ESESEIGESSQ-----------NLEDGDEQVEIGD-SDEIRVSSMKRRREKVLEEARMSL 170

Query: 40  PESGRVMHLVKAF 2
           PE G+VMHLVKAF
Sbjct: 171 PEFGKVMHLVKAF 183


>ref|XP_003554910.1| PREDICTED: uncharacterized protein LOC100797243 [Glycine max]
          Length = 487

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 55/134 (41%), Positives = 71/134 (52%), Gaps = 5/134 (3%)
 Frame = -3

Query: 388 SKIRERRFVVAXXXXXXXXXXXXXXXXXXSGKSKKCACVAYESLRASQEGFFRNSKNVRD 209
           ++IR+R+FVVA                       KC CVA+++LRASQE FF   K  +D
Sbjct: 61  NRIRQRKFVVAKKKNQKGTQNDAVSCKCKHNGGAKCVCVAFQTLRASQEEFFLKEK--KD 118

Query: 208 C-YKDENQIRXXXXXXEAINSIDRDANLDESEVTGEIGSATLKRR--RDKLLEDARRSVP 38
           C Y  E +         AI      +   + E   E G +T+KRR  RD+LLE+AR SVP
Sbjct: 119 CDYDFEEEREEEAKAVNAIEIYGTKSETVQGEEEKEEGGSTVKRRRERDRLLEEARNSVP 178

Query: 37  ES--GRVMHLVKAF 2
           E+  GRVMHLVKAF
Sbjct: 179 ENGFGRVMHLVKAF 192


>ref|XP_004141464.1| PREDICTED: uncharacterized protein LOC101204950 [Cucumis sativus]
           gi|449481375|ref|XP_004156164.1| PREDICTED:
           uncharacterized protein LOC101223763 [Cucumis sativus]
          Length = 513

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 53/142 (37%), Positives = 71/142 (50%), Gaps = 14/142 (9%)
 Frame = -3

Query: 385 KIRERRFVVAXXXXXXXXXXXXXXXXXXS----GKSKKCACVAYESLRASQEGFFRNSKN 218
           KIRER+FVVA                         SKKC C+AYE+LRASQE FF+N   
Sbjct: 80  KIRERKFVVAKKNQKKEKTGKSKTDCKCDVGNGSDSKKCLCLAYETLRASQEEFFKNQNG 139

Query: 217 VRDCYKDENQIRXXXXXXEAINSIDRDANLD--------ESEVTGEIGSATLKRRRDKLL 62
                + E ++         I  +  +  ++        ESE   ++ S+ +KRRR++LL
Sbjct: 140 GIGEIRAEIELEEEMERKLMIQDLQNEEGIETENHDVNGESESPEQVSSSIIKRRRERLL 199

Query: 61  EDARRSVPE--SGRVMHLVKAF 2
           E AR SVPE  SG+V HLV AF
Sbjct: 200 ETARNSVPETGSGKVKHLVLAF 221


Top