BLASTX nr result

ID: Cnidium21_contig00012208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012208
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305399.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
gb|AFP99173.1| biotin carboxyl carrier protein [Vernicia fordii]       59   4e-07
ref|XP_002323896.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002305399.1| predicted protein [Populus trichocarpa] gi|222848363|gb|EEE85910.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 51/119 (42%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
 Frame = -2

Query: 336 MASFSVPCPKICAPAA----NLQLGQPKPIHSLVSFRPDSISSRAFLSGSSLPNTSPILG 169
           MAS SVPCPK    AA    N Q  QPKP   ++SF    IS++       L   S   G
Sbjct: 1   MASISVPCPKTILVAAGVGSNAQNSQPKP---MISFPRAPISNQ----NPPLSLGSTFSG 53

Query: 168 FQASNRNQHEVLRVSAQLNAVSVEKSSNSVLVPD---XXXXXXXXXXXSQDAIPDASSI 1
           F+  NR Q  V++  AQLN V VEKSSNSVLV D              ++  IPD SSI
Sbjct: 54  FEWPNRKQQAVMKAQAQLNEVMVEKSSNSVLVGDSESKAASSEGKDEPTESKIPDVSSI 112


>gb|AFP99173.1| biotin carboxyl carrier protein [Vernicia fordii]
          Length = 270

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 49/118 (41%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
 Frame = -2

Query: 336 MASFSVPCPKICAPA---ANLQLGQPKPIHSLVSFRPDSISSRAFLSGSSLPNTSPILGF 166
           MAS SVPCPK    A   +N     PK   S +SF P                 S +LGF
Sbjct: 1   MASISVPCPKTALVARFGSNATNPLPK---STISFPP---------------RASSLLGF 42

Query: 165 QASNRNQHEVLRVSAQLNAVSVEKSSNSVLVPDXXXXXXXXXXXSQDA---IPDASSI 1
           Q SNR Q  V +V AQLN V  EKSSNSV V D            + A   IPDAS+I
Sbjct: 43  QWSNRKQSPVTKVQAQLNEVLAEKSSNSVPVLDNNSKVPSSEQKDEPAENNIPDASAI 100


>ref|XP_002323896.1| predicted protein [Populus trichocarpa] gi|222866898|gb|EEF04029.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 48/120 (40%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
 Frame = -2

Query: 336 MASFSVPCPKICAPAA----NLQLGQPKPIHSLVSF-RPDSISSRAFLSGSSLPNTSPIL 172
           MAS SVPCPK    AA    N Q   PKP    +SF RP + +    LS  S      + 
Sbjct: 1   MASISVPCPKTVLVAAGTGSNAQNPLPKP---RISFPRPPNSNQNPSLSFGST-----VS 52

Query: 171 GFQASNRNQHEVLRVSAQLNAVSVEKSSNSVLVPD---XXXXXXXXXXXSQDAIPDASSI 1
           GF+  NR Q  V++V AQLN    +KSSNS LV D              ++  IPD SSI
Sbjct: 53  GFEWPNRKQQAVVKVQAQLNEAIAKKSSNSALVVDTEPKVASSEGEDEPTESKIPDVSSI 112


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