BLASTX nr result

ID: Cnidium21_contig00012195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012195
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278120.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   185   8e-45
ref|XP_004135555.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   177   1e-42
ref|XP_002311809.1| predicted protein [Populus trichocarpa] gi|1...   177   2e-42
gb|ADV19264.1| hypothetical protein-like protein [Helleborus ori...   174   1e-41
ref|XP_002884571.1| NADH-ubiquinone oxidoreductase 19 kDa subuni...   174   1e-41

>ref|XP_002278120.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 8-B isoform 2 [Vitis vinifera]
           gi|225432428|ref|XP_002278102.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           8-B isoform 1 [Vitis vinifera]
           gi|297736935|emb|CBI26136.3| unnamed protein product
           [Vitis vinifera]
          Length = 106

 Score =  185 bits (469), Expect = 8e-45
 Identities = 83/102 (81%), Positives = 95/102 (93%)
 Frame = -2

Query: 574 VNSGGDPIPTSAVLMSASKHIGIRCRNENVAFLKCKKNDPNPEKCLEKGQQVTRCVLGLL 395
           V++GG PIPTSAVLM++SKHIG RC +ENVAFLKCKK DPNPEKCL+KG++VTRCV GLL
Sbjct: 5   VDAGGHPIPTSAVLMASSKHIGSRCFSENVAFLKCKKQDPNPEKCLDKGREVTRCVFGLL 64

Query: 394 KDLHQSCTKEMDAYAGCMYYNTDEFERCRKEQQEFEKACPLQ 269
           KDLHQ CTKEMDAYAGCMYY+T+EF+ CRKEQQEFEKACPL+
Sbjct: 65  KDLHQRCTKEMDAYAGCMYYHTNEFDLCRKEQQEFEKACPLE 106


>ref|XP_004135555.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 8-B-like [Cucumis sativus]
           gi|449488520|ref|XP_004158067.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           8-B-like [Cucumis sativus]
          Length = 106

 Score =  177 bits (450), Expect = 1e-42
 Identities = 78/102 (76%), Positives = 92/102 (90%)
 Frame = -2

Query: 574 VNSGGDPIPTSAVLMSASKHIGIRCRNENVAFLKCKKNDPNPEKCLEKGQQVTRCVLGLL 395
           V++ GDPIPTSAVLMS+SKHI I+CR+ENVA+L+CK+ DPNPEKCL+KG QVTRCVL LL
Sbjct: 5   VDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCVLSLL 64

Query: 394 KDLHQSCTKEMDAYAGCMYYNTDEFERCRKEQQEFEKACPLQ 269
           KDLHQ CTKEMDAY GCMYY+T+EF+ CRKEQ+ FEK CPL+
Sbjct: 65  KDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 106


>ref|XP_002311809.1| predicted protein [Populus trichocarpa] gi|118483508|gb|ABK93652.1|
           unknown [Populus trichocarpa]
           gi|118487086|gb|ABK95373.1| unknown [Populus
           trichocarpa] gi|222851629|gb|EEE89176.1| predicted
           protein [Populus trichocarpa]
          Length = 107

 Score =  177 bits (449), Expect = 2e-42
 Identities = 81/102 (79%), Positives = 90/102 (88%)
 Frame = -2

Query: 574 VNSGGDPIPTSAVLMSASKHIGIRCRNENVAFLKCKKNDPNPEKCLEKGQQVTRCVLGLL 395
           V++ G+PIPTSAVL +ASKHI  RC +ENV FLKCKK DPNPEKCL+KGQQVTRCVLGLL
Sbjct: 6   VDATGNPIPTSAVLTTASKHIATRCFSENVEFLKCKKKDPNPEKCLDKGQQVTRCVLGLL 65

Query: 394 KDLHQSCTKEMDAYAGCMYYNTDEFERCRKEQQEFEKACPLQ 269
           KDLHQ CTKEMDAY GCMYY T+EF+ CRKEQQ FEKACPL+
Sbjct: 66  KDLHQKCTKEMDAYVGCMYYYTNEFDLCRKEQQAFEKACPLE 107


>gb|ADV19264.1| hypothetical protein-like protein [Helleborus orientalis]
          Length = 110

 Score =  174 bits (442), Expect = 1e-41
 Identities = 77/100 (77%), Positives = 90/100 (90%)
 Frame = -2

Query: 574 VNSGGDPIPTSAVLMSASKHIGIRCRNENVAFLKCKKNDPNPEKCLEKGQQVTRCVLGLL 395
           VN+ G+PIPTS+VLM++S+HI  RC+ EN+AFL CKK D NPEKCL+KGQ+VTRCVLGLL
Sbjct: 8   VNAVGEPIPTSSVLMASSRHISTRCKGENMAFLTCKKKDGNPEKCLDKGQEVTRCVLGLL 67

Query: 394 KDLHQSCTKEMDAYAGCMYYNTDEFERCRKEQQEFEKACP 275
           K LHQ+CTKEMDAYAGCMYYNT+EF+ CRKEQQEFEK CP
Sbjct: 68  KSLHQTCTKEMDAYAGCMYYNTNEFDLCRKEQQEFEKVCP 107


>ref|XP_002884571.1| NADH-ubiquinone oxidoreductase 19 kDa subunit family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297330411|gb|EFH60830.1| NADH-ubiquinone
           oxidoreductase 19 kDa subunit family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 108

 Score =  174 bits (442), Expect = 1e-41
 Identities = 79/102 (77%), Positives = 90/102 (88%)
 Frame = -2

Query: 574 VNSGGDPIPTSAVLMSASKHIGIRCRNENVAFLKCKKNDPNPEKCLEKGQQVTRCVLGLL 395
           V+  G+PIPTSAVL +++KHIGIRC  EN+AFLKCKKNDPNPEKCLEKG+ VTRCVLGLL
Sbjct: 7   VDGTGNPIPTSAVLTASAKHIGIRCMPENMAFLKCKKNDPNPEKCLEKGRDVTRCVLGLL 66

Query: 394 KDLHQSCTKEMDAYAGCMYYNTDEFERCRKEQQEFEKACPLQ 269
           KDLHQ C KEMDAY GCMYY T+EF+ CRKEQ+ FEKACPL+
Sbjct: 67  KDLHQRCPKEMDAYVGCMYYYTNEFDLCRKEQEVFEKACPLK 108


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