BLASTX nr result

ID: Cnidium21_contig00012127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012127
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144741.1| PREDICTED: trafficking protein particle comp...   100   1e-19
gb|AFK42150.1| unknown [Medicago truncatula]                           97   1e-18
ref|XP_003630811.1| Trafficking protein particle complex subunit...    97   1e-18
ref|XP_002281149.1| PREDICTED: trafficking protein particle comp...    97   1e-18
ref|XP_002314001.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18

>ref|XP_004144741.1| PREDICTED: trafficking protein particle complex subunit 4-like
           [Cucumis sativus] gi|449490796|ref|XP_004158709.1|
           PREDICTED: trafficking protein particle complex subunit
           4-like [Cucumis sativus]
          Length = 141

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/53 (90%), Positives = 51/53 (96%)
 Frame = -3

Query: 271 QNMESLLKHIYEQYTDFVLKNPFYEMEMPIRCELFDINLSQAVHKDRVALLGR 113
           Q+MESLLK+IYE YTDFVLKNPFYEMEMPIRCELFDINL+QAV KDRVALLGR
Sbjct: 89  QHMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR 141


>gb|AFK42150.1| unknown [Medicago truncatula]
          Length = 141

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/53 (86%), Positives = 49/53 (92%)
 Frame = -3

Query: 271 QNMESLLKHIYEQYTDFVLKNPFYEMEMPIRCELFDINLSQAVHKDRVALLGR 113
           Q MESLLK +YE YTD+VLKNPFYEMEMPIRCELFDINL+QAV KDRVALLGR
Sbjct: 89  QQMESLLKFVYELYTDYVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR 141


>ref|XP_003630811.1| Trafficking protein particle complex subunit [Medicago truncatula]
           gi|355524833|gb|AET05287.1| Trafficking protein particle
           complex subunit [Medicago truncatula]
          Length = 213

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/53 (86%), Positives = 49/53 (92%)
 Frame = -3

Query: 271 QNMESLLKHIYEQYTDFVLKNPFYEMEMPIRCELFDINLSQAVHKDRVALLGR 113
           Q MESLLK +YE YTD+VLKNPFYEMEMPIRCELFDINL+QAV KDRVALLGR
Sbjct: 161 QQMESLLKFVYELYTDYVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR 213


>ref|XP_002281149.1| PREDICTED: trafficking protein particle complex subunit 4 [Vitis
           vinifera] gi|147807581|emb|CAN66318.1| hypothetical
           protein VITISV_040622 [Vitis vinifera]
           gi|296089818|emb|CBI39637.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/53 (88%), Positives = 49/53 (92%)
 Frame = -3

Query: 271 QNMESLLKHIYEQYTDFVLKNPFYEMEMPIRCELFDINLSQAVHKDRVALLGR 113
           Q+ME LLK IYE YTD+VLKNPFYEMEMPIRCELFDINLSQAV KDRVALLGR
Sbjct: 89  QHMEGLLKVIYELYTDYVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLGR 141


>ref|XP_002314001.1| predicted protein [Populus trichocarpa] gi|222850409|gb|EEE87956.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/53 (86%), Positives = 49/53 (92%)
 Frame = -3

Query: 271 QNMESLLKHIYEQYTDFVLKNPFYEMEMPIRCELFDINLSQAVHKDRVALLGR 113
           Q+ME LLK IYE YTD+VLKNPFYEMEMPIRCELFDINLSQA+ KDRVALLGR
Sbjct: 89  QHMEGLLKVIYELYTDYVLKNPFYEMEMPIRCELFDINLSQAIQKDRVALLGR 141


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