BLASTX nr result

ID: Cnidium21_contig00012119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012119
         (1134 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274029.1| PREDICTED: riboflavin synthase alpha chain [...   323   4e-86
ref|XP_002517920.1| Riboflavin synthase alpha chain, putative [R...   286   7e-75
gb|AFZ99647.1| riboflavin synthase [Momordica charantia]              278   2e-72
ref|XP_004139945.1| PREDICTED: riboflavin synthase-like [Cucumis...   273   6e-71
ref|XP_004169844.1| PREDICTED: riboflavin synthase-like [Cucumis...   272   1e-70

>ref|XP_002274029.1| PREDICTED: riboflavin synthase alpha chain [Vitis vinifera]
          Length = 280

 Score =  323 bits (829), Expect = 4e-86
 Identities = 174/284 (61%), Positives = 205/284 (72%)
 Frame = +2

Query: 35  MAISSSSTFVPKTLKLSSPKASILNLHNSSPLKTHLKFNLNFNLKPPSLTLSFNPHKVKP 214
           M++S   T + +T+K + PK  I N H + P +T LK N    LKP SLTL F  H  KP
Sbjct: 1   MSVSLYLTSLSRTIKPAPPKTPICNFH-ALPCRTSLKSNTI--LKPSSLTLFFTTHSPKP 57

Query: 215 QIKKSQRNGIEVKSLFTGIVEEMGEIKEIGVSQNDGGFDMKIKGKVVLEDVNLGDSIAVN 394
           +      +   ++SLFTGIVEEMGE+K++GV+ + GGFDMKI    VLEDVNLGDSI++N
Sbjct: 58  RHLFRPNHNNPIRSLFTGIVEEMGEVKQLGVADH-GGFDMKIHATTVLEDVNLGDSISIN 116

Query: 395 GTCLTVTHFDKDLFEFTVGLAPXXXXXXXXXXXXXGSVVNLERAVKPSTRMGGHFVQGHX 574
           GTCLTVT FD  L EFTVGL+P             GS+VNLERAV+P +RMGGHFVQGH 
Sbjct: 117 GTCLTVTQFDTKLSEFTVGLSPETLRKTSLSELEPGSLVNLERAVRPVSRMGGHFVQGHV 176

Query: 575 XXXXXXXXXXXXXXSLWIKVKTKPEILKYIVPKGFIAVDGTSLTVVKVFDEEGCFNFMLV 754
                         SLW+KVKT PE+L++IVPKGFIAVDGTSLTVV VFD+EGCFNFMLV
Sbjct: 177 DGTGEIVSTEPEGDSLWVKVKTTPELLRFIVPKGFIAVDGTSLTVVDVFDDEGCFNFMLV 236

Query: 755 EYTQQNVVIPLKKVGQKVNLEVDILGKYVERLLSSGFVGAMKSS 886
            YTQQ VVIPLKKVGQKVNLEVDILGKYVERLLSSGFV ++K+S
Sbjct: 237 AYTQQKVVIPLKKVGQKVNLEVDILGKYVERLLSSGFVDSIKAS 280


>ref|XP_002517920.1| Riboflavin synthase alpha chain, putative [Ricinus communis]
           gi|223542902|gb|EEF44438.1| Riboflavin synthase alpha
           chain, putative [Ricinus communis]
          Length = 286

 Score =  286 bits (732), Expect = 7e-75
 Identities = 171/299 (57%), Positives = 199/299 (66%), Gaps = 15/299 (5%)
 Frame = +2

Query: 35  MAISSSSTFVPKT--LKLSSPK-------ASILNLHNSSPLKTHLKFNLNFNLKPPSLTL 187
           MA+S+S T + KT  + LS+ K       ++I NL ++ P      FNL    KP   +L
Sbjct: 1   MALSTSLTSLSKTTNIPLSTRKFTRATTTSAIFNLLSNKP-----NFNLTSIYKPRLFSL 55

Query: 188 ------SFNPHKVKPQIKKSQRNGIEVKSLFTGIVEEMGEIKEIGVSQNDGGFDMKIKGK 349
                 S +P+   P  + S      +K LFTGIVEEMGEIK IG + NDGGFD+KI+ K
Sbjct: 56  FTSKRQSLDPNPKNPNFQNSS-----IKCLFTGIVEEMGEIKHIGPT-NDGGFDLKIRAK 109

Query: 350 VVLEDVNLGDSIAVNGTCLTVTHFDKDLFEFTVGLAPXXXXXXXXXXXXXGSVVNLERAV 529
            VL+ VNLGDSIAVNGTCLTVT F     EFTVGLAP             GS+VNLERAV
Sbjct: 110 TVLDGVNLGDSIAVNGTCLTVTSFTDG--EFTVGLAPETLRKTSLIELKSGSLVNLERAV 167

Query: 530 KPSTRMGGHFVQGHXXXXXXXXXXXXXXXSLWIKVKTKPEILKYIVPKGFIAVDGTSLTV 709
           +P++RMGGHFVQGH               SLWIKVK    +L+YIVPKGFIAVDGTSLTV
Sbjct: 168 QPTSRMGGHFVQGHVDGTGEIVEKEIEGDSLWIKVKVDSGLLRYIVPKGFIAVDGTSLTV 227

Query: 710 VKVFDEEGCFNFMLVEYTQQNVVIPLKKVGQKVNLEVDILGKYVERLLSSGFVGAMKSS 886
           V VFD+E CFNFMLV YTQQ VVIPLK VGQKVNLEVDILGKYVERLLSSGFV ++K+S
Sbjct: 228 VDVFDKEDCFNFMLVAYTQQKVVIPLKNVGQKVNLEVDILGKYVERLLSSGFVESIKAS 286


>gb|AFZ99647.1| riboflavin synthase [Momordica charantia]
          Length = 282

 Score =  278 bits (711), Expect = 2e-72
 Identities = 158/285 (55%), Positives = 189/285 (66%), Gaps = 1/285 (0%)
 Frame = +2

Query: 32  TMAISSSSTFVPKTLKLSSPKAS-ILNLHNSSPLKTHLKFNLNFNLKPPSLTLSFNPHKV 208
           T +  S++T + +  K+  P  + ILN+   SP   H      FN      TL  +    
Sbjct: 3   TFSSLSTATALSQIPKMVPPGGNTILNVRPGSP---HFCLKFKFNTNRSLFTLFTS--SC 57

Query: 209 KPQIKKSQRNGIEVKSLFTGIVEEMGEIKEIGVSQNDGGFDMKIKGKVVLEDVNLGDSIA 388
           KPQ++   R    ++ LFTGIVEEMG +K +GV++N GGFD++I  K VLE V+LGDSIA
Sbjct: 58  KPQLRCKSRPRTSIQCLFTGIVEEMGRVKNLGVTEN-GGFDLEIVAKTVLEGVHLGDSIA 116

Query: 389 VNGTCLTVTHFDKDLFEFTVGLAPXXXXXXXXXXXXXGSVVNLERAVKPSTRMGGHFVQG 568
           VNGTCLTVT FD +L EFTVGLAP             GS VNLERAV+P +RMGGHFVQG
Sbjct: 117 VNGTCLTVTAFDHELSEFTVGLAPETLRKTSLVELVPGSPVNLERAVQPISRMGGHFVQG 176

Query: 569 HXXXXXXXXXXXXXXXSLWIKVKTKPEILKYIVPKGFIAVDGTSLTVVKVFDEEGCFNFM 748
           H               SLWIKV+T  ++LKYIVPKGFIAVDGTSLTVV VFDEE  FNFM
Sbjct: 177 HVDGTGEIISMEPEEDSLWIKVRTSEDLLKYIVPKGFIAVDGTSLTVVDVFDEEKAFNFM 236

Query: 749 LVEYTQQNVVIPLKKVGQKVNLEVDILGKYVERLLSSGFVGAMKS 883
           LV YTQ +VVIPLKKVG  VNLEVDILGKYV+RLLS+G +  +KS
Sbjct: 237 LVAYTQNSVVIPLKKVGDLVNLEVDILGKYVQRLLSNGAITPIKS 281


>ref|XP_004139945.1| PREDICTED: riboflavin synthase-like [Cucumis sativus]
          Length = 278

 Score =  273 bits (698), Expect = 6e-71
 Identities = 148/245 (60%), Positives = 169/245 (68%)
 Frame = +2

Query: 149 NLNFNLKPPSLTLSFNPHKVKPQIKKSQRNGIEVKSLFTGIVEEMGEIKEIGVSQNDGGF 328
           N NFN K    TL  + HK  PQ++   R    V+ LFTGIVEE+G +K +G+ +N GGF
Sbjct: 36  NFNFNTKTSLFTLFTSTHK--PQLRYKSRPRASVQCLFTGIVEEIGHVKNLGIDEN-GGF 92

Query: 329 DMKIKGKVVLEDVNLGDSIAVNGTCLTVTHFDKDLFEFTVGLAPXXXXXXXXXXXXXGSV 508
           D++I  + VLE VNLGDSIAVNGTCLTVT FD  L EF VGLAP             GS 
Sbjct: 93  DLEINARTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPETLRKTSLVELSPGSP 152

Query: 509 VNLERAVKPSTRMGGHFVQGHXXXXXXXXXXXXXXXSLWIKVKTKPEILKYIVPKGFIAV 688
           VNLERAV+P +RMGGHFVQGH               SLWIKVKT   +L YIVPKGFIAV
Sbjct: 153 VNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAV 212

Query: 689 DGTSLTVVKVFDEEGCFNFMLVEYTQQNVVIPLKKVGQKVNLEVDILGKYVERLLSSGFV 868
           DG SLTVV VFD+E  FNFMLV YTQ+NVVIPLKKVG  VNLEVDILGKYV+RLLS+G V
Sbjct: 213 DGASLTVVDVFDDEKAFNFMLVAYTQKNVVIPLKKVGHLVNLEVDILGKYVQRLLSNGAV 272

Query: 869 GAMKS 883
             ++S
Sbjct: 273 KPIES 277


>ref|XP_004169844.1| PREDICTED: riboflavin synthase-like [Cucumis sativus]
          Length = 278

 Score =  272 bits (696), Expect = 1e-70
 Identities = 155/287 (54%), Positives = 187/287 (65%)
 Frame = +2

Query: 23  TCKTMAISSSSTFVPKTLKLSSPKASILNLHNSSPLKTHLKFNLNFNLKPPSLTLSFNPH 202
           T  +++ ++S + +P+ L    P    L+L +S     H     NFN K    TL  + H
Sbjct: 3   TFSSLSTATSLSNIPRML----PPIGSLHLPSS-----HFFPKFNFNTKTSLFTLFTSTH 53

Query: 203 KVKPQIKKSQRNGIEVKSLFTGIVEEMGEIKEIGVSQNDGGFDMKIKGKVVLEDVNLGDS 382
           +  PQ+    R    V+ LFTGIVEE+G +K +G+ +N GGFD++I  + VLE VNLGDS
Sbjct: 54  R--PQLCYKSRPRASVQCLFTGIVEEIGHVKSLGIDEN-GGFDLEINARTVLEGVNLGDS 110

Query: 383 IAVNGTCLTVTHFDKDLFEFTVGLAPXXXXXXXXXXXXXGSVVNLERAVKPSTRMGGHFV 562
           IAVNGTCLTVT FD  L EF VGLAP             GS VNLERAV+P +RMGGHFV
Sbjct: 111 IAVNGTCLTVTAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFV 170

Query: 563 QGHXXXXXXXXXXXXXXXSLWIKVKTKPEILKYIVPKGFIAVDGTSLTVVKVFDEEGCFN 742
           QGH               SLWIKVKT   +L YIVPKGFIAVDGTSLTVV VFD+E  FN
Sbjct: 171 QGHVDGTGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFN 230

Query: 743 FMLVEYTQQNVVIPLKKVGQKVNLEVDILGKYVERLLSSGFVGAMKS 883
           FMLV YTQ+NVVIPLKKVG  VNLEVDILGKYV+RLLS+G +  ++S
Sbjct: 231 FMLVAYTQKNVVIPLKKVGHLVNLEVDILGKYVQRLLSNGAIKPIES 277


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