BLASTX nr result

ID: Cnidium21_contig00012093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012093
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265...   251   1e-64
emb|CBI23047.3| unnamed protein product [Vitis vinifera]              250   2e-64
gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel...   239   3e-61
ref|XP_002515833.1| nucleic acid binding protein, putative [Rici...   232   5e-59
ref|XP_002317797.1| predicted protein [Populus trichocarpa] gi|2...   216   4e-54

>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
          Length = 229

 Score =  251 bits (640), Expect = 1e-64
 Identities = 124/195 (63%), Positives = 145/195 (74%), Gaps = 15/195 (7%)
 Frame = -3

Query: 652 MGDAYWRYAEARQAAAVPALLGKRARPDFDVPGGHDLTGYYGRDDARGEPRGMREGDSLG 473
           M D YWRY E RQ   +P+L  KR R D+DVPGGHDL  Y+ R+D R   R +R+ DS+G
Sbjct: 1   MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60

Query: 472 ASYERYLR--------------SGQLGNLPIDDPRIMGLRGADL-AVAKRQSLGAGGGRI 338
           ASY+RYLR              SG + + P+DDPR++G+RG D  A  K QSLG  GGR 
Sbjct: 61  ASYDRYLRNAMPSYGGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGGRP 120

Query: 337 ETPLPPDASPTLYVEGLPANCSRREVAHIFRPFVGYKEVRLVTKDSRHSKGDALVLCFVD 158
           E PLPPDAS TL+VEGLPANC+RREV+HIFRPFVGYKEVRLV+K+SRHS GD LVLCFVD
Sbjct: 121 ELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFVD 180

Query: 157 FLSPAHAATAMDALQ 113
           F+SPAHAATAMDALQ
Sbjct: 181 FVSPAHAATAMDALQ 195


>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  250 bits (639), Expect = 2e-64
 Identities = 123/196 (62%), Positives = 145/196 (73%), Gaps = 16/196 (8%)
 Frame = -3

Query: 652 MGDAYWRYAEARQAAAVPALLGKRARPDFDVPGGHDLTGYYGRDDARGEPRGMREGDSLG 473
           M D YWRY E RQ   +P+L  KR R D+DVPGGHDL  Y+ R+D R   R +R+ DS+G
Sbjct: 1   MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60

Query: 472 ASYERYLRSGQLGNL---------------PIDDPRIMGLRGADL-AVAKRQSLGAGGGR 341
           ASY+RYLR+ Q+ +                P+DDPR++G+RG D  A  K QSLG  GGR
Sbjct: 61  ASYDRYLRNAQMPSYGGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGGR 120

Query: 340 IETPLPPDASPTLYVEGLPANCSRREVAHIFRPFVGYKEVRLVTKDSRHSKGDALVLCFV 161
            E PLPPDAS TL+VEGLPANC+RREV+HIFRPFVGYKEVRLV+K+SRHS GD LVLCFV
Sbjct: 121 PELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFV 180

Query: 160 DFLSPAHAATAMDALQ 113
           DF+SPAHAATAMDALQ
Sbjct: 181 DFVSPAHAATAMDALQ 196


>gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
          Length = 233

 Score =  239 bits (611), Expect = 3e-61
 Identities = 121/199 (60%), Positives = 147/199 (73%), Gaps = 19/199 (9%)
 Frame = -3

Query: 652 MGDAYWRYAEARQAA--AVPALLGKRARPDFDVPGGHDLTGYYGRDDARGEPRGMREGDS 479
           M DAYWRY ++RQ    ++  ++GKR+R D+DVP GH+L  Y+ RDD RG  RGMR+ DS
Sbjct: 1   MADAYWRYGDSRQPPPQSLTQIVGKRSRSDYDVPSGHELPSYFSRDDERGTLRGMRDTDS 60

Query: 478 LGASYERYLRSGQLGNL----------------PIDDPRIMGLRGADLAVA-KRQSLGAG 350
           +GASY+RYLRS Q+ +                  +DDPRI+G+   + A   K ++LG G
Sbjct: 61  IGASYDRYLRSAQVSSYGGGQSARPISGGMSSRAVDDPRIVGMGSVEPATTVKDRTLGYG 120

Query: 349 GGRIETPLPPDASPTLYVEGLPANCSRREVAHIFRPFVGYKEVRLVTKDSRHSKGDALVL 170
           GGR E PLPPDAS TL+VEGLP+NC+RREVAHIFRPFVGYKEVRLV+K+SRH  GD LVL
Sbjct: 121 GGRPEVPLPPDASSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLVL 180

Query: 169 CFVDFLSPAHAATAMDALQ 113
           CFVDFLSPAHAATAMDALQ
Sbjct: 181 CFVDFLSPAHAATAMDALQ 199


>ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223545062|gb|EEF46575.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 232

 Score =  232 bits (592), Expect = 5e-59
 Identities = 121/198 (61%), Positives = 142/198 (71%), Gaps = 18/198 (9%)
 Frame = -3

Query: 652 MGDAYWRYAEARQAAA--VPALLGKRARPDFDVPGGHDLTGYYGRDDARGEPRGMREGDS 479
           M DAYWRY++ARQ     +P L+GKR+R D+DV  GH+L  YY RDD RG  R +R+ DS
Sbjct: 1   MADAYWRYSDARQPQQQPIPTLVGKRSRSDYDVTSGHELPNYYTRDDDRGALRAIRDTDS 60

Query: 478 LGASYERYLRSGQLG---------------NLPIDDPRIMGLRGADLA-VAKRQSLGAGG 347
           +GASY+RYLRS  +                N   DDPRIMG+ G D     K ++LG G 
Sbjct: 61  IGASYDRYLRSAPISSYSGGQSARPISGVPNRVADDPRIMGIGGLDPGPTVKDRTLGLGS 120

Query: 346 GRIETPLPPDASPTLYVEGLPANCSRREVAHIFRPFVGYKEVRLVTKDSRHSKGDALVLC 167
           GR ET LPPDA+ TL+VEGLP++CSRREVAHIFRPFVGYKEVRLV+K+SR   GD LVLC
Sbjct: 121 GRPETSLPPDATSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRRPGGDPLVLC 180

Query: 166 FVDFLSPAHAATAMDALQ 113
           FVDFLSPAHAATAMDALQ
Sbjct: 181 FVDFLSPAHAATAMDALQ 198


>ref|XP_002317797.1| predicted protein [Populus trichocarpa] gi|222858470|gb|EEE96017.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  216 bits (550), Expect = 4e-54
 Identities = 115/202 (56%), Positives = 142/202 (70%), Gaps = 19/202 (9%)
 Frame = -3

Query: 652 MGDAYWRYA-EARQAA--AVPALLGKRARPDFDVPGGHDLTGYYGRDDARGEPRGMREGD 482
           M D+YWRYA ++RQ    ++ +L GKR R D+D+P G DL+ YY RDD RG    +R+ D
Sbjct: 1   MADSYWRYAGDSRQQPPQSMSSLTGKRPRIDYDIPSGRDLSSYYSRDDDRGALHVIRDSD 60

Query: 481 SLGASYERYLRSGQLGNL---------------PIDDPRIMGLRGADL-AVAKRQSLGAG 350
           S+GASY+RYLRSG + +                P+DD R++ +   D  A  K +SL  G
Sbjct: 61  SIGASYDRYLRSGTVSSYGGGQSARAMSGVPSHPVDDTRMVSMGPMDPGASVKDRSLRMG 120

Query: 349 GGRIETPLPPDASPTLYVEGLPANCSRREVAHIFRPFVGYKEVRLVTKDSRHSKGDALVL 170
            GR E  LPPDAS TL+VEGLP++C+RREV+HIFRPFVGYKEVRLV+K+SRH  GD LVL
Sbjct: 121 SGRSEVSLPPDASSTLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESRHPGGDPLVL 180

Query: 169 CFVDFLSPAHAATAMDALQDSR 104
           CFVDFLSPAHAATAMDALQ  R
Sbjct: 181 CFVDFLSPAHAATAMDALQGYR 202


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