BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012073
         (1234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17549.3| unnamed protein product [Vitis vinifera]              299   1e-78
ref|XP_002310208.1| predicted protein [Populus trichocarpa] gi|2...   283   5e-74
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   280   5e-73
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       275   2e-71
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   253   7e-65

>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  299 bits (765), Expect = 1e-78
 Identities = 174/355 (49%), Positives = 222/355 (62%), Gaps = 16/355 (4%)
 Frame = -3

Query: 1019 MDLDELDGPSQAP-SRSTRFAXXXXXXXXXXXXXXXXP----EFDTSFVLRSTKEESAES 855
            MDLD+LDGP++AP  R +RFA                     + D   ++   +E+S   
Sbjct: 1    MDLDDLDGPNRAPVRRPSRFAPKSSKPKLIPKPEPSSQPEPSKLDDVTLINKKEEDSQPP 60

Query: 854  LIAAVDAGNAIRVEMESSCTTASNRDDIIKMGTALKTEGNQPEEDLMEEDLHKDEDPVVR 675
            L+   D   A           +S ++ +I+M    K E     ED MEED  +DEDPVVR
Sbjct: 61   LVKKADEPFA-----------SSTQNGVIEMEVEAKAE----VEDAMEED-DRDEDPVVR 104

Query: 674  EIDVFFTPS-LDSNSLIYVMQYPLKPCWRPYELDERCEEVRVKPASSEVEIDLSVDLDSK 498
            EIDVFFTP   D N+ IYV+QYPL+P WRPYEL ERC+EVRVKPAS+EVE+DLS+D+DSK
Sbjct: 105  EIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSK 164

Query: 497  NYDPDLSTAVKMTKQVLSSSLKLPCRSGYAVGVLKGNKLHLNPVHAAVQLRPSMQYFGSG 318
            NYDPD   A +M KQ LS+S K P  +GY VGVL GNKLHLNP+HA VQLRPSM+Y  SG
Sbjct: 165  NYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSG 224

Query: 317  ALRKKNMVHYDEGAV------GEEKFVGPLKKQNKQKEVLNEVLKDLGENWIHLKYHGFK 156
              ++KN V  D  +        EE+ VG LKKQNK   +L+E   D  E+W+ LKYH  +
Sbjct: 225  GAKRKNNVTGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLKYHSSE 284

Query: 155  SNASSKYLQKMVGEEGSEIEFSMSSFDYVNSFC-PGAS---TRQGGPSKRHLLTL 3
            S+ S++YLQKMV E+ S I+F MS ++YVNS C PG S    R  G S+R LL++
Sbjct: 285  SDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSM 339


>ref|XP_002310208.1| predicted protein [Populus trichocarpa] gi|222853111|gb|EEE90658.1|
            predicted protein [Populus trichocarpa]
          Length = 667

 Score =  283 bits (725), Expect = 5e-74
 Identities = 171/346 (49%), Positives = 216/346 (62%), Gaps = 7/346 (2%)
 Frame = -3

Query: 1019 MDLDELDGPSQAPSRSTRFAXXXXXXXXXXXXXXXXPEFDTSFVLRSTKEESAESLIAAV 840
            MDLD LD PS+     +RFA                 E   S  +    + S  +   A 
Sbjct: 1    MDLDGLDEPSKVRKPPSRFAPTSKKPQPKSKPKPKP-EPQESVPVAPKPDPSVSN--TAE 57

Query: 839  DAGNAIRVEMESSCTTASNRDDIIKMGTALKTEGNQP--EEDLMEEDLHKDEDPVV-REI 669
            DA   I   +  + T  SN +  +KM    K E      E DLM+ D  +DED VV REI
Sbjct: 58   DAKPKIDDTLSKTETGVSNGN--VKMEIDAKEERGAAVKENDLMDVDKEEDEDDVVVREI 115

Query: 668  DVFFTPSLDSNSLIYVMQYPLKPCWRPYELDERCEEVRVKPASSEVEIDLSVDLDSKNYD 489
            DV++TPS+D N+ +YVMQYPL+PCWRPYELDERC+EVRVKP S+EVE+DLS+D D+KNYD
Sbjct: 116  DVYYTPSVDPNTQLYVMQYPLRPCWRPYELDERCKEVRVKPESTEVEVDLSID-DTKNYD 174

Query: 488  PDLSTAVKMTKQVLSSSLKLPCRSGYAVGVLKGNKLHLNPVHAAVQLRPSMQYFGSGALR 309
            PD+++ + M KQ LSSS   P  +GYAVGVL GNKLHLNP+HA VQLRPSM Y  SG  +
Sbjct: 175  PDIASRLNMKKQTLSSSWSPPPATGYAVGVLIGNKLHLNPIHAVVQLRPSMDYLSSGNSK 234

Query: 308  -KKNMVHYDEGAVGEEKFVGPLKKQNKQKEVLNEVLKDLGENWIHLKYHGFKSNASSKYL 132
             KKN    ++    E K +G  KKQ+KQ    NE   D+ E+WI LKYHG KS+ SS+YL
Sbjct: 235  GKKNATSGEDS--NEGKPLGLPKKQSKQMSSGNEQKPDVEESWIPLKYHGSKSDLSSRYL 292

Query: 131  QKMVGEEGSEIEFSMSSFDYVNSFCPGAST---RQGGPSKRHLLTL 3
            Q MV  E S IEF+M+ +DY++S CPG S    +  GPS+R LL+L
Sbjct: 293  QNMVAPESSTIEFAMNPYDYMSSLCPGISNNNIKLNGPSRRVLLSL 338


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
            vinifera]
          Length = 672

 Score =  280 bits (716), Expect = 5e-73
 Identities = 168/355 (47%), Positives = 214/355 (60%), Gaps = 16/355 (4%)
 Frame = -3

Query: 1019 MDLDELDGPSQAP-SRSTRFAXXXXXXXXXXXXXXXXP----EFDTSFVLRSTKEESAES 855
            MDLD+LDGP++AP  R +RFA                     + D   ++   +E+S   
Sbjct: 1    MDLDDLDGPNRAPVRRPSRFAPKSSKPKLIPKPEPSSQPEPSKLDDVTLINKKEEDSQPP 60

Query: 854  LIAAVDAGNAIRVEMESSCTTASNRDDIIKMGTALKTEGNQPEEDLMEEDLHKDEDPVVR 675
            L+   D   A           +S ++ +I+M    K E     ED MEED  +DEDPVVR
Sbjct: 61   LVKKADEPFA-----------SSTQNGVIEMEVEAKAE----VEDAMEED-DRDEDPVVR 104

Query: 674  EIDVFFTPS-LDSNSLIYVMQYPLKPCWRPYELDERCEEVRVKPASSEVEIDLSVDLDSK 498
            EIDVFFTP   D N+ IYV+QYPL+P WRPYEL ERC+EVRVKPAS+EVE+DLS+D+DSK
Sbjct: 105  EIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSK 164

Query: 497  NYDPDLSTAVKMTKQVLSSSLKLPCRSGYAVGVLKGNKLHLNPVHAAVQLRPSMQYFGSG 318
            NYDPD   A +M KQ LS+S K P  +GY VGVL GNKLHLNP+HA VQLRPSM+Y  SG
Sbjct: 165  NYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSG 224

Query: 317  ALRKKNMVHYDEGAV------GEEKFVGPLKKQNKQKEVLNEVLKDLGENWIHLKYHGFK 156
              ++KN V  D  +        EE+ VG LKKQ                +W+ LKYH  +
Sbjct: 225  GAKRKNNVTGDTNSAVKLEVSNEEESVGSLKKQ----------------SWVPLKYHSSE 268

Query: 155  SNASSKYLQKMVGEEGSEIEFSMSSFDYVNSFC-PGAS---TRQGGPSKRHLLTL 3
            S+ S++YLQKMV E+ S I+F MS ++YVNS C PG S    R  G S+R LL++
Sbjct: 269  SDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSM 323


>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  275 bits (702), Expect = 2e-71
 Identities = 152/343 (44%), Positives = 211/343 (61%), Gaps = 4/343 (1%)
 Frame = -3

Query: 1019 MDLDELDGPSQAPSRSTRFAXXXXXXXXXXXXXXXXPEFDTSFVLRSTKEESAESLIAAV 840
            MD D+LD PSQAP+R +RFA                    TS  +   +E  ++ +    
Sbjct: 1    MDFDDLDEPSQAPTRPSRFAPKGSKFKPRTEPVAA-----TSNSIAKKEELDSKPVSPIN 55

Query: 839  DAGNAIRVEMESSCTTASNRDDIIKMGTALKTEGNQPEEDLMEEDLHKDEDPVVREIDVF 660
             +  A   + E + + + ++   + +   ++ E  QP+++ ME    + ED +VREIDV+
Sbjct: 56   SSTTAAAGKAEDAASASVSQSVAMDVDAKVEEEAEQPKDEPMESR-EEGEDEIVREIDVY 114

Query: 659  FTPSLDSNSLIYVMQYPLKPCWRPYELDERCEEVRVKPASSEVEIDLSVDLDSKNYDPDL 480
             TPS+D N+ +YV+QYPL+P WRPYELD+RCEEVRVK  S+EVE+DL+VD+DSKNYD D 
Sbjct: 115  LTPSIDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSDA 174

Query: 479  STAVKMTKQVLSSSLKLPCRSGYAVGVLKGNKLHLNPVHAAVQLRPSMQYFGSGALRKKN 300
               V MTKQ L+SS K P  +GYAVGVL GNKLHLNP+HA VQLRPSMQ++   + +++ 
Sbjct: 175  DPRVSMTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRRT 234

Query: 299  MV--HYDEGAVGEEKFVGPLKKQNKQKEVLNEVLKDLGENWIHLKYHGFKSNASSKYLQK 126
                + ++   GEE   G LKKQ K    + E  KD  E+WI L YHG +S+ S  Y++K
Sbjct: 235  TASSNLEDNTKGEEVTTGSLKKQGKPSGPVIEQNKDTREDWIPLNYHGARSDISMSYVRK 294

Query: 125  MVGEEGSEIEFSMSSFDYVNSFCPGASTRQGGPS--KRHLLTL 3
            MV  + S I+FSM + DYVN+ CPG S    G +   R LL+L
Sbjct: 295  MVEHDSSHIQFSM-NHDYVNTLCPGTSNENNGSNGPSRVLLSL 336


>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit RPC5-like [Cucumis sativus]
          Length = 702

 Score =  253 bits (646), Expect = 7e-65
 Identities = 152/356 (42%), Positives = 205/356 (57%), Gaps = 17/356 (4%)
 Frame = -3

Query: 1019 MDLDELDGPSQAPSRSTRFAXXXXXXXXXXXXXXXXPEFDTSFVLRSTKEESAESLIAAV 840
            MDLD LD  SQ PSR++RFA                   +    L   + +   S    V
Sbjct: 1    MDLDGLDEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKP-EPQQPLTKLEPQPPISKPEVV 59

Query: 839  DAGNAIRVEMESS-------CTTASNRDDIIKMGTALKTEGNQP---EEDLMEEDLHKDE 690
            +    +  + E            +S  + + KM    K+E  +    ++D +EED    E
Sbjct: 60   EPDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDA--SE 117

Query: 689  DPVVREIDVFFTPSLDSNSLIYVMQYPLKPCWRPYELDERCEEVRVKPASSEVEIDLSVD 510
            D VVREIDV FTPS+DSNS +YV+QYPL+P WRPYE + RC+EVRVKP++ EVE+DL+VD
Sbjct: 118  DMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVD 177

Query: 509  LDSKNYDPDLSTAVKMTKQVLSSSLKLPCRSGYAVGVLKGNKLHLNPVHAAVQLRPSMQY 330
            ++S NYD       +M KQ L+SS + P  + YAVG+L GNKLHLNPVHA VQLRPS ++
Sbjct: 178  IESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEH 237

Query: 329  FGSGALRKKNMVHYDEGAVGEE----KFVGPLKKQNKQKEVLNEVLKDLGENWIHLKYHG 162
              SG  ++KN V  D     EE       G  +KQ KQ     EV     E WI LKY+G
Sbjct: 238  LNSGGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYG 297

Query: 161  FKSNASSKYLQKMVGEEGSEIEFSMSSFDYVNSFCPGAST---RQGGPSKRHLLTL 3
             +S+ S+++LQ MV +  S ++FSMS  DY++S CPG ST   +  GPSK++LL+L
Sbjct: 298  LESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSL 353