BLASTX nr result
ID: Cnidium21_contig00012068
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00012068 (1940 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002321943.1| f-box family protein [Populus trichocarpa] g... 61 9e-07 ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g... 60 2e-06 >ref|XP_002321943.1| f-box family protein [Populus trichocarpa] gi|222868939|gb|EEF06070.1| f-box family protein [Populus trichocarpa] Length = 360 Score = 61.2 bits (147), Expect = 9e-07 Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 8/248 (3%) Frame = -2 Query: 1780 LPVRCLTCLPALRTLTLMLWDLWESDLYLSLPELTTLSLNMCKMPQKIWNFPALKSLKLY 1601 LP LTC +L+TL L ++ L +LP L +LSL+ C Sbjct: 136 LPPAFLTC-QSLKTLQLSGFNF--KALGFALPNLISLSLSHCSFTN-------------- 178 Query: 1600 DVEFPSNMSDTFAALVSLENLTLQG---ICLRDCYIRCPRLMNLKIETRYFDCFKD---K 1439 PS+ D FA+ + L+NL+L+ + + I +L+NL+I + + Sbjct: 179 ----PSDFDDPFASCLKLKNLSLRSCSFLSSKVLKISGLQLLNLEIVGLGYMNLAGLLYR 234 Query: 1438 IVVLAPKLTNFTAIGIFQITFEDSKLENVYLKLRGWINRTNIPRK--KMKEYYEQFIFML 1265 I + APKL +F + F L ++ I R ++ K K KE Y I M Sbjct: 235 IDIFAPKLISFVYKLSHVVDFSGLHLPSLN------IARVHVCTKQDKKKEAYLGLINMF 288 Query: 1264 PGLGSAEILNLQLETIEALSLISDSFVSCASPFPNLKYVKLPPGFEEASLSSILRCYLLG 1085 GLG+A+ + L +TIE L SPF LK +++ P + + + YLLG Sbjct: 289 KGLGNAQSVMLHSQTIEVLGSFPGLLEQEPSPFKRLKSLQVAPN-NKPFVPPHVMTYLLG 347 Query: 1084 GSPTATIV 1061 G+P A + Sbjct: 348 GTPLAETI 355 >ref|XP_002331320.1| f-box family protein [Populus trichocarpa] gi|222873903|gb|EEF11034.1| f-box family protein [Populus trichocarpa] Length = 453 Score = 60.1 bits (144), Expect = 2e-06 Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 21/199 (10%) Frame = -2 Query: 1621 LKSLKLYDVEFPSNMSDT-FAALVSLENLTLQGICLR---DCYIRCPRLMNLKIETRYFD 1454 L+SLK + N F++ +LENLT++ ICL + I L +L+I ++ Sbjct: 189 LQSLKTLHLGGAQNFDGKIFSSCPNLENLTIEDICLNVIENFNIHALSLKSLEILNWRYN 248 Query: 1453 CFKD--KIVVLAPKLTNFTAIGIFQITFED---SKLENVYLKLRGWINRTNIPRKKMKEY 1289 K K++++APKLT+F G + + D + L++V + L+ + + N P +++ Sbjct: 249 RIKQGCKVMLVAPKLTSFKFDGNTPLFWSDVNLTSLDDVNVVLQRYHHSHNYPFYVVEDE 308 Query: 1288 Y-------EQ-----FIFMLPGLGSAEILNLQLETIEALSLISDSFVSCASPFPNLKYVK 1145 Y EQ I ML SA+ L L + IE LS + + SPF NLKY+K Sbjct: 309 YISEEDETEQGLGLNLIKMLHQFCSAKSLTLSMNIIEILSEVPAALDKHPSPFSNLKYLK 368 Query: 1144 LPPGFEEASLSSILRCYLL 1088 L ++ +L + + Y L Sbjct: 369 LKTDHKDVTLPAHVLNYFL 387