BLASTX nr result

ID: Cnidium21_contig00012065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012065
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40948.1| unknown [Medicago truncatula]                           57   2e-06
ref|XP_003602304.1| F-box/WD repeat-containing protein [Medicago...    57   2e-06

>gb|AFK40948.1| unknown [Medicago truncatula]
          Length = 162

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
 Frame = +3

Query: 3   HLGSRK-QEMLSNQHSNGE--LAAETSLADSEPSVGILDKILFFLGDLEAASVQAKRARG 173
           +LGSRK +  LS   S+ E     E+S+A+     GILDKILFF+GDLEAASV AKR+R 
Sbjct: 102 YLGSRKYRRQLSGHTSSSETDFTGESSVAEERSCRGILDKILFFIGDLEAASVDAKRSRV 161

Query: 174 I 176
           I
Sbjct: 162 I 162


>ref|XP_003602304.1| F-box/WD repeat-containing protein [Medicago truncatula]
           gi|355491352|gb|AES72555.1| F-box/WD repeat-containing
           protein [Medicago truncatula]
          Length = 162

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
 Frame = +3

Query: 3   HLGSRK-QEMLSNQHSNGE--LAAETSLADSEPSVGILDKILFFLGDLEAASVQAKRARG 173
           +LGSRK +  LS   S+ E     E+S+A+     GILDKILFF+GDLEAASV AKR+R 
Sbjct: 102 YLGSRKYRRQLSGHTSSSETDFTGESSVAEERSCRGILDKILFFIGDLEAASVDAKRSRV 161

Query: 174 I 176
           I
Sbjct: 162 I 162


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