BLASTX nr result
ID: Cnidium21_contig00012049
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00012049 (790 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 331 1e-88 emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera] 331 1e-88 ref|XP_003521635.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 326 4e-87 ref|XP_002330040.1| predicted protein [Populus trichocarpa] gi|2... 326 4e-87 ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|2... 325 5e-87 >ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed protein product [Vitis vinifera] Length = 764 Score = 331 bits (848), Expect = 1e-88 Identities = 187/265 (70%), Positives = 209/265 (78%), Gaps = 11/265 (4%) Frame = -3 Query: 764 SLKASFGP-TSFLASAIATPNSSVLSEEAFKGLGGFVKD----------YEKDLNLXXXX 618 SL+ SF SF+ SAIATPNS VLSEEAFKGLGGF KD Y+ ++ Sbjct: 53 SLRRSFKQGISFVPSAIATPNS-VLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAA 111 Query: 617 XXXXXXXXXXXDELDINKLGLPHKLVQTLADKGITELFPIQRAVLVPALEGKDIIARAKT 438 EL + +LGLP +LV++L +GIT LFPIQRAVLVPALEG+D+IARAKT Sbjct: 112 QED---------ELALAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKT 162 Query: 437 GTGKTLAFGIPIIKRLTEDDQESGSMRRSSRLPRALVLAPTRELAKQVENEIKEAAPYLS 258 GTGKTLAFGIPIIKRL+EDD++ S RRS RLPR LVLAPTRELAKQVE EIKE+APYLS Sbjct: 163 GTGKTLAFGIPIIKRLSEDDEKRTSQRRSGRLPRVLVLAPTRELAKQVEKEIKESAPYLS 222 Query: 257 TVCVYGGVPYGPQQNALSRGVDVVVGTPGRIIDLIDRNTLKLGEVQFLVLDEADQMLAVG 78 TVCVYGGV Y QQNALSRGVDVVVGTPGRIIDLI N+LKLGEVQ LVLDEADQMLAVG Sbjct: 223 TVCVYGGVSYITQQNALSRGVDVVVGTPGRIIDLIKGNSLKLGEVQNLVLDEADQMLAVG 282 Query: 77 FEEAVEMILQKIPTERQSMLFSATM 3 FEE VE+IL+K+P+ERQSMLFSATM Sbjct: 283 FEEDVEVILEKLPSERQSMLFSATM 307 >emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera] Length = 786 Score = 331 bits (848), Expect = 1e-88 Identities = 187/265 (70%), Positives = 209/265 (78%), Gaps = 11/265 (4%) Frame = -3 Query: 764 SLKASFGP-TSFLASAIATPNSSVLSEEAFKGLGGFVKD----------YEKDLNLXXXX 618 SL+ SF SF+ SAIATPNS VLSEEAFKGLGGF KD Y+ ++ Sbjct: 53 SLRRSFKQGISFVPSAIATPNS-VLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAA 111 Query: 617 XXXXXXXXXXXDELDINKLGLPHKLVQTLADKGITELFPIQRAVLVPALEGKDIIARAKT 438 EL + +LGLP +LV++L +GIT LFPIQRAVLVPALEG+D+IARAKT Sbjct: 112 QED---------ELALAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKT 162 Query: 437 GTGKTLAFGIPIIKRLTEDDQESGSMRRSSRLPRALVLAPTRELAKQVENEIKEAAPYLS 258 GTGKTLAFGIPIIKRL+EDD++ S RRS RLPR LVLAPTRELAKQVE EIKE+APYLS Sbjct: 163 GTGKTLAFGIPIIKRLSEDDEKRTSQRRSGRLPRVLVLAPTRELAKQVEKEIKESAPYLS 222 Query: 257 TVCVYGGVPYGPQQNALSRGVDVVVGTPGRIIDLIDRNTLKLGEVQFLVLDEADQMLAVG 78 TVCVYGGV Y QQNALSRGVDVVVGTPGRIIDLI N+LKLGEVQ LVLDEADQMLAVG Sbjct: 223 TVCVYGGVSYITQQNALSRGVDVVVGTPGRIIDLIKGNSLKLGEVQNLVLDEADQMLAVG 282 Query: 77 FEEAVEMILQKIPTERQSMLFSATM 3 FEE VE+IL+K+P+ERQSMLFSATM Sbjct: 283 FEEDVEVILEKLPSERQSMLFSATM 307 >ref|XP_003521635.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Glycine max] Length = 771 Score = 326 bits (835), Expect = 4e-87 Identities = 179/247 (72%), Positives = 203/247 (82%) Frame = -3 Query: 743 PTSFLASAIATPNSSVLSEEAFKGLGGFVKDYEKDLNLXXXXXXXXXXXXXXXDELDINK 564 PT+F+ SA+ATPNSS+LSEEAFKGLG +D+++ DELDI+K Sbjct: 62 PTTFVPSAVATPNSSLLSEEAFKGLG---RDFDE---FDHASDSDSAAESVHPDELDISK 115 Query: 563 LGLPHKLVQTLADKGITELFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKRLTE 384 L LP +LV++L +GIT+LFPIQRAVLVPALEG+DIIARAKTGTGKTLAFGIPIIK LTE Sbjct: 116 LDLPSRLVESLQSRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPIIKGLTE 175 Query: 383 DDQESGSMRRSSRLPRALVLAPTRELAKQVENEIKEAAPYLSTVCVYGGVPYGPQQNALS 204 D+ + S RRS RLPR LVLAPTRELAKQVE EIKE+APYLSTVCVYGGV Y QQ ALS Sbjct: 176 DEH-APSHRRSGRLPRFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYVTQQGALS 234 Query: 203 RGVDVVVGTPGRIIDLIDRNTLKLGEVQFLVLDEADQMLAVGFEEAVEMILQKIPTERQS 24 RGVDVVVGTPGRIIDLI+ N+LKL EVQ+LVLDEADQMLAVGFEE VEMIL+ +P +RQS Sbjct: 235 RGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVEMILENLPAQRQS 294 Query: 23 MLFSATM 3 MLFSATM Sbjct: 295 MLFSATM 301 >ref|XP_002330040.1| predicted protein [Populus trichocarpa] gi|222871465|gb|EEF08596.1| predicted protein [Populus trichocarpa] Length = 735 Score = 326 bits (835), Expect = 4e-87 Identities = 184/278 (66%), Positives = 210/278 (75%), Gaps = 16/278 (5%) Frame = -3 Query: 788 SEKWAHFTSLKA------------SFGPTSFLASAIATPNSSVLSEEAFKGLGGFVKDYE 645 SEK HF SL A + T SAIATPN +LSEEAFKGL GF D+E Sbjct: 12 SEKPPHFNSLIAKTQLSFKHSLIINTNSTFTPPSAIATPNP-ILSEEAFKGLDGF-SDFE 69 Query: 644 KDLN----LXXXXXXXXXXXXXXXDELDINKLGLPHKLVQTLADKGITELFPIQRAVLVP 477 D + + DELDI+KLGLP +LVQTL ++GIT LFPIQRAVL+P Sbjct: 70 ADADTDDAVDYDSSETEPNSNTSEDELDISKLGLPQRLVQTLQNRGITHLFPIQRAVLIP 129 Query: 476 ALEGKDIIARAKTGTGKTLAFGIPIIKRLTEDDQESGSMRRSSRLPRALVLAPTRELAKQ 297 LEG+D+IARAKTGTGKTLAFGIPIIKRLTED + GS RR+ RLP+ LVLAPTRELAKQ Sbjct: 130 TLEGRDLIARAKTGTGKTLAFGIPIIKRLTEDAELRGSQRRTGRLPKVLVLAPTRELAKQ 189 Query: 296 VENEIKEAAPYLSTVCVYGGVPYGPQQNALSRGVDVVVGTPGRIIDLIDRNTLKLGEVQF 117 VE EIKE+APYLSTVCVYGGV Y QQNALSRGVDVVVGTPGRIIDL+ N+LKLGEV++ Sbjct: 190 VEKEIKESAPYLSTVCVYGGVSYATQQNALSRGVDVVVGTPGRIIDLLKGNSLKLGEVEY 249 Query: 116 LVLDEADQMLAVGFEEAVEMILQKIPTERQSMLFSATM 3 LVLDEADQML+ GFEE VE+IL+ +P++RQSMLFSATM Sbjct: 250 LVLDEADQMLSFGFEEDVEVILESLPSKRQSMLFSATM 287 >ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|222871469|gb|EEF08600.1| predicted protein [Populus trichocarpa] Length = 775 Score = 325 bits (834), Expect = 5e-87 Identities = 177/256 (69%), Positives = 208/256 (81%), Gaps = 5/256 (1%) Frame = -3 Query: 755 ASFGPTSFLASAIATPNSSVLSEEAFKGLGGFVKDYEKDLN-----LXXXXXXXXXXXXX 591 +SF P S AIA+PNS +LSEEAFKGL GF D+E D++ + Sbjct: 75 SSFSPPS----AIASPNS-ILSEEAFKGLDGF-SDFEADVDAGGADVDYASSETEPSSNT 128 Query: 590 XXDELDINKLGLPHKLVQTLADKGITELFPIQRAVLVPALEGKDIIARAKTGTGKTLAFG 411 DELD++KLGLPH+LVQTL ++GIT LFPIQRAVL+PALEG+D+IARAKTGTGKTLAFG Sbjct: 129 SEDELDVSKLGLPHRLVQTLQNRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFG 188 Query: 410 IPIIKRLTEDDQESGSMRRSSRLPRALVLAPTRELAKQVENEIKEAAPYLSTVCVYGGVP 231 IPIIKRLTED + GS RR+ RLP+ LVLAPTRELAKQVE EIKE+APYLS+VCVYGGV Sbjct: 189 IPIIKRLTEDAELRGSQRRTGRLPKVLVLAPTRELAKQVEKEIKESAPYLSSVCVYGGVS 248 Query: 230 YGPQQNALSRGVDVVVGTPGRIIDLIDRNTLKLGEVQFLVLDEADQMLAVGFEEAVEMIL 51 Y QQ+ALSRGVDVVVGTPGRIIDL+ N+LKLGEV++LVLDEADQML+ GFEE VE+IL Sbjct: 249 YVTQQSALSRGVDVVVGTPGRIIDLLKGNSLKLGEVEYLVLDEADQMLSFGFEEDVEVIL 308 Query: 50 QKIPTERQSMLFSATM 3 + +P++RQSMLFSATM Sbjct: 309 ENLPSKRQSMLFSATM 324