BLASTX nr result

ID: Cnidium21_contig00012028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012028
         (841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529271.1| Single-stranded DNA-binding protein, mitocho...   281   1e-73
ref|XP_002319495.1| predicted protein [Populus trichocarpa] gi|2...   274   2e-71
ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding prote...   271   2e-70
ref|XP_003591190.1| Single-stranded DNA-binding protein [Medicag...   268   1e-69
ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding prote...   267   2e-69

>ref|XP_002529271.1| Single-stranded DNA-binding protein, mitochondrial precursor,
           putative [Ricinus communis] gi|223531260|gb|EEF33103.1|
           Single-stranded DNA-binding protein, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 213

 Score =  281 bits (720), Expect = 1e-73
 Identities = 141/215 (65%), Positives = 169/215 (78%), Gaps = 10/215 (4%)
 Frame = +3

Query: 15  MSSIALRIAKY--INSPVSTRTHSPIPVAGCVRGGNNGLDSTASSGSDA--------DKV 164
           MSS+A++ AK+  ++SP +T +    PV G  R       + + SG +         ++ 
Sbjct: 1   MSSLAVKFAKFLRVSSPAATTSS---PVVGLQRSFKTLYSTESFSGENDVGKNNELDEEF 57

Query: 165 DDFFPPKQELHLQGVDPQKGWDFRGVHKAIICGKIGNVPIQKILRNGRTVTIFTVGTGGM 344
           DDF   K EL +QGVDP+KGW FRGVHKAIICGK+G  P+QKILRNGRTVTIFTVGTGGM
Sbjct: 58  DDFLGEKPELQIQGVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGM 117

Query: 345 FDQRLLGTKDLPKPAQWHRIAVHNEDLGAYAIQKLVKNSSVYVEGDIETRVYNDSINGTV 524
           FDQR++G KDLPKPAQWHRIAVHNE LGAYA+Q+L KNSSVYVEG+IETRVYNDSI+G V
Sbjct: 118 FDQRIVGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSSVYVEGEIETRVYNDSISGEV 177

Query: 525 KNIPEICVRRDGRIRLIKSGENVSNISLDDLREGL 629
           KNIPEIC+RRDG+IRL+ SG+NVS+IS DDLREGL
Sbjct: 178 KNIPEICIRRDGKIRLVTSGKNVSDISFDDLREGL 212


>ref|XP_002319495.1| predicted protein [Populus trichocarpa] gi|222857871|gb|EEE95418.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  274 bits (700), Expect = 2e-71
 Identities = 144/219 (65%), Positives = 166/219 (75%), Gaps = 14/219 (6%)
 Frame = +3

Query: 15  MSSIALRIAKYINSPVSTRTHSPI--PVAGCVRGGNNGLDS---TASSGSDA-----DKV 164
           MSS+ LR AK +  P      SP+  P +    G    L S   T S  SD      DKV
Sbjct: 1   MSSLVLRFAKLLRVP------SPVIMPTSSLGVGLQRSLRSCYSTVSFNSDNEEGKNDKV 54

Query: 165 ----DDFFPPKQELHLQGVDPQKGWDFRGVHKAIICGKIGNVPIQKILRNGRTVTIFTVG 332
               DD    ++E   QGVDP+KGW+FRGVH+AIICGK+G  P+QKILRNGRTVTIFTVG
Sbjct: 55  EEEFDDLLGDRRESRFQGVDPRKGWEFRGVHRAIICGKVGQAPVQKILRNGRTVTIFTVG 114

Query: 333 TGGMFDQRLLGTKDLPKPAQWHRIAVHNEDLGAYAIQKLVKNSSVYVEGDIETRVYNDSI 512
           TGGMFDQR++G+KDLPKPAQWHRIAVHN+ LGAYA+Q+L KNSSVYVEGDIE RVYNDSI
Sbjct: 115 TGGMFDQRIIGSKDLPKPAQWHRIAVHNDSLGAYAVQQLAKNSSVYVEGDIEIRVYNDSI 174

Query: 513 NGTVKNIPEICVRRDGRIRLIKSGENVSNISLDDLREGL 629
           +G VKNIPEICVRRDG+IRLI+SGEN+SNIS +DLREGL
Sbjct: 175 SGEVKNIPEICVRRDGKIRLIRSGENISNISFEDLREGL 213


>ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
           [Glycine max]
          Length = 217

 Score =  271 bits (692), Expect = 2e-70
 Identities = 139/220 (63%), Positives = 163/220 (74%), Gaps = 15/220 (6%)
 Frame = +3

Query: 15  MSSIALRIAKYINSPVSTRTHSPIPVAGCVRGGNNGLDSTASSG--------SDADK--- 161
           M+S+A+R+AK++     T       + G  R G +   ++ S G        +DA K   
Sbjct: 1   MNSMAVRLAKHLRLSALTS----FSLGGVPRSGASWYSTSLSGGENDHPLPDNDAPKKEA 56

Query: 162 ----VDDFFPPKQELHLQGVDPQKGWDFRGVHKAIICGKIGNVPIQKILRNGRTVTIFTV 329
                DDF   K EL LQGVDP+KGW FRGVHKAIICGK+G  P+QKILRNGR +TIFTV
Sbjct: 57  LDEEFDDFLGEKPELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNITIFTV 116

Query: 330 GTGGMFDQRLLGTKDLPKPAQWHRIAVHNEDLGAYAIQKLVKNSSVYVEGDIETRVYNDS 509
           GTGGMFDQR+ G KDLPKPAQWHRIAVHN+ LG YA+Q+L KNSSVYVEGDIETRVYNDS
Sbjct: 117 GTGGMFDQRIQGPKDLPKPAQWHRIAVHNDILGTYAVQQLFKNSSVYVEGDIETRVYNDS 176

Query: 510 INGTVKNIPEICVRRDGRIRLIKSGENVSNISLDDLREGL 629
           ING VK+IPEICVRRDGRIRLIK+GE++   SLD+LREGL
Sbjct: 177 INGNVKSIPEICVRRDGRIRLIKNGESIDKTSLDELREGL 216


>ref|XP_003591190.1| Single-stranded DNA-binding protein [Medicago truncatula]
           gi|355480238|gb|AES61441.1| Single-stranded DNA-binding
           protein [Medicago truncatula]
           gi|388493454|gb|AFK34793.1| unknown [Medicago
           truncatula]
          Length = 212

 Score =  268 bits (685), Expect = 1e-69
 Identities = 137/215 (63%), Positives = 164/215 (76%), Gaps = 10/215 (4%)
 Frame = +3

Query: 15  MSSIALRIAKYINS------PVST----RTHSPIPVAGCVRGGNNGLDSTASSGSDADKV 164
           M+S+ALR++K++        P ST     T +    AG     NNGL+         D+ 
Sbjct: 1   MNSVALRLSKHLRRSSHASVPRSTVLCYSTFTSETDAGQPSRDNNGLNKEELD----DEF 56

Query: 165 DDFFPPKQELHLQGVDPQKGWDFRGVHKAIICGKIGNVPIQKILRNGRTVTIFTVGTGGM 344
           DDF   + EL LQGVDP +GW FRGVHKAIICGK+G  P+QKILRNG+ VTIFTVGTGGM
Sbjct: 57  DDFLGGRPELQLQGVDPSRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGM 116

Query: 345 FDQRLLGTKDLPKPAQWHRIAVHNEDLGAYAIQKLVKNSSVYVEGDIETRVYNDSINGTV 524
           +DQR++G+KDLPKPAQWHRIAVHNE LGAYA+Q+L KNSSVYVEG+IETRVYNDSING V
Sbjct: 117 YDQRIVGSKDLPKPAQWHRIAVHNEVLGAYAVQQLFKNSSVYVEGEIETRVYNDSINGEV 176

Query: 525 KNIPEICVRRDGRIRLIKSGENVSNISLDDLREGL 629
           K+IPEICVRRDG++RLI+SGE+V   SLD+ REGL
Sbjct: 177 KSIPEICVRRDGKLRLIRSGESVDKTSLDEFREGL 211


>ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
           [Vitis vinifera] gi|296089740|emb|CBI39559.3| unnamed
           protein product [Vitis vinifera]
          Length = 208

 Score =  267 bits (683), Expect = 2e-69
 Identities = 128/171 (74%), Positives = 146/171 (85%)
 Frame = +3

Query: 117 NGLDSTASSGSDADKVDDFFPPKQELHLQGVDPQKGWDFRGVHKAIICGKIGNVPIQKIL 296
           +G D    +G   +  +D    K  L LQGVDP+KGW FRGVHKAIICGK+G  P+QKIL
Sbjct: 37  DGGDGDGKNGEGEESDNDLVTEKPNLQLQGVDPRKGWGFRGVHKAIICGKVGQAPVQKIL 96

Query: 297 RNGRTVTIFTVGTGGMFDQRLLGTKDLPKPAQWHRIAVHNEDLGAYAIQKLVKNSSVYVE 476
           RNGRTVTIFTVGTGGMFDQR+ G KDLPKPAQWHRIAVHNE LGAYA+Q+LVKNSSVYVE
Sbjct: 97  RNGRTVTIFTVGTGGMFDQRI-GGKDLPKPAQWHRIAVHNEPLGAYAVQQLVKNSSVYVE 155

Query: 477 GDIETRVYNDSINGTVKNIPEICVRRDGRIRLIKSGENVSNISLDDLREGL 629
           GDIE RVYNDSING VK++PEIC+RRDGRIRLIK+GE++SNIS+D+LREGL
Sbjct: 156 GDIEVRVYNDSINGEVKHVPEICIRRDGRIRLIKTGESISNISVDELREGL 206


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