BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012027
         (1268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275686.2| PREDICTED: protein THYLAKOID FORMATION1, chl...   380   e-103
ref|XP_004136805.1| PREDICTED: protein THYLAKOID FORMATION 1, ch...   368   2e-99
ref|XP_003539891.1| PREDICTED: protein THYLAKOID FORMATION1, chl...   353   4e-95
ref|XP_003527468.1| PREDICTED: protein THYLAKOID FORMATION1, chl...   353   5e-95
sp|Q7XAB8.1|THF1_SOLTU RecName: Full=Protein THYLAKOID FORMATION...   351   2e-94

>ref|XP_002275686.2| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Vitis
            vinifera]
          Length = 299

 Score =  380 bits (977), Expect = e-103
 Identities = 204/295 (69%), Positives = 228/295 (77%)
 Frame = +3

Query: 141  TSLSFSTLTIQSSSDRKLSVSFSPSLISNFGASRLRLLHDSIAVRVSQSSSISRFVVRCS 320
            TSLSFS L    SS+RK+ V  + S  S F A R R    ++ VR S SSS SR VV+C 
Sbjct: 5    TSLSFSALG--QSSERKVPVPTTRSFASAFEAFRFRANFYAVGVRSSSSSSSSRMVVQCM 62

Query: 321  SSSTDVPTVSETKANFLQAYKRPIPSIYNTVLQELIVQQHLTRYKRTHRYDAVFALGFVT 500
            SS TDVPTVSETK NFL+ YKRPIPSIYNT+LQEL+VQQHL RYKRT+RYDAVFALGFVT
Sbjct: 63   SSVTDVPTVSETKMNFLKNYKRPIPSIYNTLLQELMVQQHLMRYKRTYRYDAVFALGFVT 122

Query: 501  VYDRLMEGYPSDEDREAIFRAYIKALKEDPEQYRSDAQKLEEWARSQTANTLVDFSTNEG 680
            VYD+LM+GYPSDEDR+ IF+ YIKAL+EDPEQYR DAQ LEEWARSQTA++LV+FS+ EG
Sbjct: 123  VYDQLMDGYPSDEDRDIIFQVYIKALREDPEQYRKDAQMLEEWARSQTASSLVEFSSKEG 182

Query: 681  DVQSILKDIAERAKSKESFSYSRFFAIGLFRLLELADATEPTTLEKLCAALNIDKRSVDR 860
            +V+ ILKDIAERA  K SFSYSRFFAIGLFRLLELA+ATEPT LEKLCAA NI KRSVDR
Sbjct: 183  EVEGILKDIAERAGGKGSFSYSRFFAIGLFRLLELANATEPTILEKLCAAFNISKRSVDR 242

Query: 861  DLAVYRNLLTKLVQAXXXXXXXXXXXXXXXXXXTGPQTANEAVTNCLGEYLYLGL 1025
            DL VYRNLLTKLVQA                     Q ANEA+T CLGEY Y G+
Sbjct: 243  DLDVYRNLLTKLVQAKELLKEYVDREKKKREERVESQKANEAITKCLGEYEYTGV 297


>ref|XP_004136805.1| PREDICTED: protein THYLAKOID FORMATION 1, chloroplastic-like [Cucumis
            sativus] gi|449493105|ref|XP_004159194.1| PREDICTED:
            protein THYLAKOID FORMATION 1, chloroplastic-like
            [Cucumis sativus]
          Length = 298

 Score =  368 bits (944), Expect = 2e-99
 Identities = 198/289 (68%), Positives = 223/289 (77%)
 Frame = +3

Query: 144  SLSFSTLTIQSSSDRKLSVSFSPSLISNFGASRLRLLHDSIAVRVSQSSSISRFVVRCSS 323
            S+SFSTL     SDR+L +  S S  SNF     R    +   RV  S+  SR V+ C S
Sbjct: 6    SISFSTLN--QCSDRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVIHCMS 63

Query: 324  SSTDVPTVSETKANFLQAYKRPIPSIYNTVLQELIVQQHLTRYKRTHRYDAVFALGFVTV 503
            + TDV TV+ETK NFL+AYKRPIPSIYNTVLQELIVQQHL RYKRT+RYD VFALGFVTV
Sbjct: 64   AGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGFVTV 123

Query: 504  YDRLMEGYPSDEDREAIFRAYIKALKEDPEQYRSDAQKLEEWARSQTANTLVDFSTNEGD 683
            YD+LMEGYPSDEDREAIF+AYIKAL EDPEQYR DA+K EEWARSQTA +LV+F++ EG+
Sbjct: 124  YDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFASREGE 183

Query: 684  VQSILKDIAERAKSKESFSYSRFFAIGLFRLLELADATEPTTLEKLCAALNIDKRSVDRD 863
            V+SILKDIAERA SK +FSYSRFFAIGLFRLLELA+ATEP+ LEKLCAALNIDK+ VDRD
Sbjct: 184  VESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGVDRD 243

Query: 864  LAVYRNLLTKLVQAXXXXXXXXXXXXXXXXXXTGPQTANEAVTNCLGEY 1010
            L VYRNLL+KLVQA                   G QTANEA+T CLGEY
Sbjct: 244  LDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEY 292


>ref|XP_003539891.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
           [Glycine max]
          Length = 291

 Score =  353 bits (907), Expect = 4e-95
 Identities = 191/284 (67%), Positives = 220/284 (77%)
 Frame = +3

Query: 141 TSLSFSTLTIQSSSDRKLSVSFSPSLISNFGASRLRLLHDSIAVRVSQSSSISRFVVRCS 320
           +S SFSTLT QSSS R L+     +L SN    R R+    + V V  S+S S+ VVRCS
Sbjct: 6   SSFSFSTLT-QSSSQRNLT-----TLSSNSPTFRFRVGFSCLNVGVRASNSASKMVVRCS 59

Query: 321 SSSTDVPTVSETKANFLQAYKRPIPSIYNTVLQELIVQQHLTRYKRTHRYDAVFALGFVT 500
           SS  + PTVSETK NFL+AYKRPIPSIYNTVLQELIVQQHL RYKR++RYDAVFALGFVT
Sbjct: 60  SSVAEPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVT 119

Query: 501 VYDRLMEGYPSDEDREAIFRAYIKALKEDPEQYRSDAQKLEEWARSQTANTLVDFSTNEG 680
           VY++LMEGYPSDEDR+AIF+AYI+ALKEDPEQYR DA+KLEEWARSQ  N+L++FS+ EG
Sbjct: 120 VYEQLMEGYPSDEDRDAIFQAYIQALKEDPEQYRVDAKKLEEWARSQNPNSLLEFSSREG 179

Query: 681 DVQSILKDIAERAKSKESFSYSRFFAIGLFRLLELADATEPTTLEKLCAALNIDKRSVDR 860
           +V+ ILKDIAERA  K  FSYSRFFAIGLFRLLELA+A EPT LEKLCA LN++KRSVDR
Sbjct: 180 EVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDR 239

Query: 861 DLAVYRNLLTKLVQAXXXXXXXXXXXXXXXXXXTGPQTANEAVT 992
           DL VYRNLL+KLVQA                    PQ +NEA+T
Sbjct: 240 DLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKSNEAIT 283


>ref|XP_003527468.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
           [Glycine max]
          Length = 291

 Score =  353 bits (906), Expect = 5e-95
 Identities = 192/284 (67%), Positives = 219/284 (77%)
 Frame = +3

Query: 141 TSLSFSTLTIQSSSDRKLSVSFSPSLISNFGASRLRLLHDSIAVRVSQSSSISRFVVRCS 320
           +S SFSTLT QSSS R LS     +L SN    R+R+      V V  S+S S+ VVRCS
Sbjct: 6   SSFSFSTLT-QSSSPRNLS-----TLSSNSPTFRIRVGFSCHYVGVRASNSASKIVVRCS 59

Query: 321 SSSTDVPTVSETKANFLQAYKRPIPSIYNTVLQELIVQQHLTRYKRTHRYDAVFALGFVT 500
           S+  + PTVSETK NFL+AYKRPIPSIYNTVLQELIVQQHL RYKR++RYDAVFALGFVT
Sbjct: 60  SAVAEPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVT 119

Query: 501 VYDRLMEGYPSDEDREAIFRAYIKALKEDPEQYRSDAQKLEEWARSQTANTLVDFSTNEG 680
           VY++LMEGYPSDEDR+AIF+AYI+ALKEDPEQYR DA+KLEEWAR+Q   +LVDFS+ EG
Sbjct: 120 VYEQLMEGYPSDEDRDAIFQAYIQALKEDPEQYRVDAKKLEEWARAQNPTSLVDFSSREG 179

Query: 681 DVQSILKDIAERAKSKESFSYSRFFAIGLFRLLELADATEPTTLEKLCAALNIDKRSVDR 860
           +V+ ILKDIAERA  K  FSYSRFFAIGLFRLLELA+A EPT LEKLCA LN+DKRSVDR
Sbjct: 180 EVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVDKRSVDR 239

Query: 861 DLAVYRNLLTKLVQAXXXXXXXXXXXXXXXXXXTGPQTANEAVT 992
           DL VYRNLL+KLVQA                    PQ +NEA+T
Sbjct: 240 DLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKSNEAIT 283


>sp|Q7XAB8.1|THF1_SOLTU RecName: Full=Protein THYLAKOID FORMATION1, chloroplastic; Flags:
            Precursor gi|33469614|gb|AAQ19850.1| light-regulated
            chloroplast-localized protein [Solanum tuberosum]
          Length = 293

 Score =  351 bits (901), Expect = 2e-94
 Identities = 187/295 (63%), Positives = 226/295 (76%), Gaps = 1/295 (0%)
 Frame = +3

Query: 141  TSLSFSTLTIQSSSDRKLSVSFSPSLISNFGASRLRLLHDSIAVRVSQSSSISRFVVRCS 320
            TS+SFS +T   S++RK SVS S S+       R R      +V V  S+S SRFVV C+
Sbjct: 5    TSVSFSAIT--QSAERKSSVSSSRSI----DTFRFRSNFSFDSVNVRSSNSTSRFVVHCT 58

Query: 321  SSST-DVPTVSETKANFLQAYKRPIPSIYNTVLQELIVQQHLTRYKRTHRYDAVFALGFV 497
            SSS  D+PTV++TK  FL AYKRPIP++YNTVLQELIVQQHLTRYK++++YD VFALGFV
Sbjct: 59   SSSAADLPTVADTKLKFLTAYKRPIPTVYNTVLQELIVQQHLTRYKKSYQYDPVFALGFV 118

Query: 498  TVYDRLMEGYPSDEDREAIFRAYIKALKEDPEQYRSDAQKLEEWARSQTANTLVDFSTNE 677
            TVYD+LMEGYPS+EDR AIF+AYI+ALKEDPEQYR+DAQKLEEWAR+Q ANTLVDFS+ E
Sbjct: 119  TVYDQLMEGYPSEEDRNAIFKAYIEALKEDPEQYRADAQKLEEWARTQNANTLVDFSSKE 178

Query: 678  GDVQSILKDIAERAKSKESFSYSRFFAIGLFRLLELADATEPTTLEKLCAALNIDKRSVD 857
            G++++I KDIA+RA +K+ F YSR FA+GLFRLLELA+ T+PT LEKLCAALN++K+SVD
Sbjct: 179  GEIENIFKDIAQRAGTKDGFCYSRLFAVGLFRLLELANVTDPTILEKLCAALNVNKKSVD 238

Query: 858  RDLAVYRNLLTKLVQAXXXXXXXXXXXXXXXXXXTGPQTANEAVTNCLGEYLYLG 1022
            RDL VYRNLL+KLVQA                     Q ANE VT CLG+Y Y G
Sbjct: 239  RDLDVYRNLLSKLVQAKELLKEYVEREKKKRGERE-TQKANETVTKCLGDYQYAG 292