BLASTX nr result

ID: Cnidium21_contig00012024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00012024
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA02696.1| 21D7 antigen [Daucus carota]                          117   7e-25
sp|Q06364.2|PSMD3_DAUCA RecName: Full=Probable 26S proteasome no...   117   7e-25
ref|XP_002521275.1| 26S proteasome regulatory subunit S3, putati...   116   2e-24
ref|XP_002306189.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
sp|P93768.1|PSMD3_TOBAC RecName: Full=Probable 26S proteasome no...   116   2e-24

>dbj|BAA02696.1| 21D7 antigen [Daucus carota]
          Length = 488

 Score =  117 bits (294), Expect = 7e-25
 Identities = 58/69 (84%), Positives = 58/69 (84%)
 Frame = +3

Query: 3   WMVSKETGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPANSHKDKESAEKXXXXXXX 182
           WMVSKETGDIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFPANSHKDKESAEK       
Sbjct: 413 WMVSKETGDIYSTNEPQAAFNSRIAFCLNMHNEAVRALRFPANSHKDKESAEKRRERQQQ 472

Query: 183 XXXLAKHIA 209
              LAKHIA
Sbjct: 473 EQELAKHIA 481


>sp|Q06364.2|PSMD3_DAUCA RecName: Full=Probable 26S proteasome non-ATPase regulatory subunit
           3; Short=26S proteasome subunit S3; AltName: Full=26S
           proteasome regulatory subunit RPN3; AltName:
           Full=Nuclear antigen 21D7
          Length = 489

 Score =  117 bits (294), Expect = 7e-25
 Identities = 58/69 (84%), Positives = 58/69 (84%)
 Frame = +3

Query: 3   WMVSKETGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPANSHKDKESAEKXXXXXXX 182
           WMVSKETGDIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFPANSHKDKESAEK       
Sbjct: 414 WMVSKETGDIYSTNEPQAAFNSRIAFCLNMHNEAVRALRFPANSHKDKESAEKRRERQQQ 473

Query: 183 XXXLAKHIA 209
              LAKHIA
Sbjct: 474 EQELAKHIA 482


>ref|XP_002521275.1| 26S proteasome regulatory subunit S3, putative [Ricinus communis]
           gi|223539543|gb|EEF41131.1| 26S proteasome regulatory
           subunit S3, putative [Ricinus communis]
          Length = 491

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/69 (82%), Positives = 58/69 (84%)
 Frame = +3

Query: 3   WMVSKETGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPANSHKDKESAEKXXXXXXX 182
           WMVSKETGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFP NSHK+KESAEK       
Sbjct: 416 WMVSKETGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHKEKESAEKRRERQQQ 475

Query: 183 XXXLAKHIA 209
              LAKHIA
Sbjct: 476 EQELAKHIA 484


>ref|XP_002306189.1| predicted protein [Populus trichocarpa] gi|222849153|gb|EEE86700.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/69 (82%), Positives = 58/69 (84%)
 Frame = +3

Query: 3   WMVSKETGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPANSHKDKESAEKXXXXXXX 182
           WMVSKETGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFP NSHK+KESAEK       
Sbjct: 413 WMVSKETGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHKEKESAEKRRERQQQ 472

Query: 183 XXXLAKHIA 209
              LAKHIA
Sbjct: 473 EQELAKHIA 481


>sp|P93768.1|PSMD3_TOBAC RecName: Full=Probable 26S proteasome non-ATPase regulatory subunit
           3; Short=26S proteasome subunit S3; AltName: Full=26S
           proteasome regulatory subunit RPN3; AltName:
           Full=Nuclear antigen 21D7 gi|1864003|dbj|BAA19252.1|
           21D7 [Nicotiana tabacum]
          Length = 488

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/69 (82%), Positives = 58/69 (84%)
 Frame = +3

Query: 3   WMVSKETGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPANSHKDKESAEKXXXXXXX 182
           WMVSKETGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFP NSHK+KESAEK       
Sbjct: 413 WMVSKETGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHKEKESAEKRRERQQQ 472

Query: 183 XXXLAKHIA 209
              LAKHIA
Sbjct: 473 EQELAKHIA 481


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