BLASTX nr result

ID: Cnidium21_contig00011989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011989
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516769.1| ATP binding protein, putative [Ricinus commu...    89   4e-16
ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vit...    84   1e-14
ref|XP_002315781.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_004170713.1| PREDICTED: protein TIME FOR COFFEE-like, par...    78   9e-13
ref|XP_004140148.1| PREDICTED: protein TIME FOR COFFEE-like [Cuc...    78   9e-13

>ref|XP_002516769.1| ATP binding protein, putative [Ricinus communis]
            gi|223543857|gb|EEF45383.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1613

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 65/145 (44%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
 Frame = +1

Query: 151  TARSKTP-TSNGIASSEHV-TSSSVAAKFPNSISGFPPNFVXXXXXXXXXXXXXWKNSNR 324
            +ARSKTP TSNG    EH+ +SSS+AAKFPN++SGFP N V             WKNS R
Sbjct: 1262 SARSKTPATSNGSVYPEHIPSSSSMAAKFPNALSGFPSNLVQSSSSPAQSPQ--WKNSVR 1319

Query: 325  TPXXXXXXXXXXXXXXP-KNHQQQQTRTLQNHTQISFGTNQKPAA-XXXXXXXXXXXXXX 498
            T                 KN  QQQ RT Q HTQISF  N KP+A               
Sbjct: 1320 TNTSQAPSSSLSSTSTSLKNLSQQQGRTQQGHTQISFAANPKPSATTQGQPTPSSNQSTS 1379

Query: 499  XXVAVGSPTHSSLSKGASSSPRTNT 573
              V VGSPT +S+SK A  SPRT +
Sbjct: 1380 PPVVVGSPT-TSMSKSAGGSPRTTS 1403


>ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vitis vinifera]
          Length = 1587

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 63/143 (44%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
 Frame = +1

Query: 154  ARSKTP-TSNGIASSEHV-TSSSVAAKFPNSISGFPPNFVXXXXXXXXXXXXXWKNSNRT 327
            ARSKTP TSNG   S+H+ +SSS+AAKFPN++S FPPNFV             WKNS RT
Sbjct: 1225 ARSKTPATSNGSVYSDHLPSSSSMAAKFPNALSAFPPNFV--QGSSSPGQSPQWKNSVRT 1282

Query: 328  PXXXXXXXXXXXXXXP--KNHQQQQTRTLQNHTQISFGTNQK-PAAXXXXXXXXXXXXXX 498
                              KN  QQQ R+ Q+H QISF  N K  AA              
Sbjct: 1283 STSQVPTLALSSSTASSLKNISQQQARSQQSHMQISFAANPKSSAAPQGQQPPNSNQSPS 1342

Query: 499  XXVAVGSPTHSSLSKGASSSPRT 567
              + VGSPT  SLSK    SPRT
Sbjct: 1343 PPMVVGSPT--SLSKSTGGSPRT 1363


>ref|XP_002315781.1| predicted protein [Populus trichocarpa] gi|222864821|gb|EEF01952.1|
           predicted protein [Populus trichocarpa]
          Length = 373

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 62/144 (43%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
 Frame = +1

Query: 151 TARSKTP-TSNGIASSEHVTSSS-VAAKFPNSISGFPPNFVXXXXXXXXXXXXXWKNSNR 324
           ++RSKTP TSNG A  +H++SSS +A KFPN +S FP NFV             WKNS R
Sbjct: 29  SSRSKTPATSNGSAYPDHISSSSAMATKFPNPLSAFPQNFVQNSSSPAQSPQ--WKNSVR 86

Query: 325 TPXXXXXXXXXXXXXXP-KNHQQQQTRTLQNHTQISFGTNQKP-AAXXXXXXXXXXXXXX 498
           T                 KN  QQQ RT   HTQISF  NQKP A+              
Sbjct: 87  TTTSQVPSPSLTPASPTLKNLPQQQGRTQGGHTQISFAANQKPSASPQGQPNPSSNQSPS 146

Query: 499 XXVAVGSPTHSSLSKGASSSPRTN 570
             + VGSPT +S+SK A  SPRT+
Sbjct: 147 PPMMVGSPT-TSISKSAGGSPRTS 169


>ref|XP_004170713.1| PREDICTED: protein TIME FOR COFFEE-like, partial [Cucumis sativus]
          Length = 979

 Score = 78.2 bits (191), Expect = 9e-13
 Identities = 57/143 (39%), Positives = 67/143 (46%), Gaps = 3/143 (2%)
 Frame = +1

Query: 154  ARSKTPT-SNGIASSEHVTSSSVAAKFPNSISGFPPNFVXXXXXXXXXXXXXWKNSNRTP 330
            AR+KT T SNG    EH  +SS+AAKFPN++S +  N V             WKNS RT 
Sbjct: 623  ARTKTSTTSNGNVYGEHTPASSMAAKFPNALS-YSQNLVQSNSNSPAQSPQ-WKNSVRTT 680

Query: 331  XXXXXXXXXXXXXXP--KNHQQQQTRTLQNHTQISFGTNQKPAAXXXXXXXXXXXXXXXX 504
                             KN  QQQ R   NH+QISF TN K                   
Sbjct: 681  SSQVQTPPLSSSNTSSIKNLPQQQGRPQPNHSQISFSTNTKSTTQSQGQQPANSNQSPSP 740

Query: 505  VAVGSPTHSSLSKGASSSPRTNT 573
              +GSPT+SS+SKGA  SPRT T
Sbjct: 741  GMIGSPTNSSISKGAGGSPRTAT 763


>ref|XP_004140148.1| PREDICTED: protein TIME FOR COFFEE-like [Cucumis sativus]
          Length = 1560

 Score = 78.2 bits (191), Expect = 9e-13
 Identities = 57/143 (39%), Positives = 67/143 (46%), Gaps = 3/143 (2%)
 Frame = +1

Query: 154  ARSKTPT-SNGIASSEHVTSSSVAAKFPNSISGFPPNFVXXXXXXXXXXXXXWKNSNRTP 330
            AR+KT T SNG    EH  +SS+AAKFPN++S +  N V             WKNS RT 
Sbjct: 1204 ARTKTSTTSNGNVYGEHTPASSMAAKFPNALS-YSQNLVQSNSNSPAQSPQ-WKNSVRTT 1261

Query: 331  XXXXXXXXXXXXXXP--KNHQQQQTRTLQNHTQISFGTNQKPAAXXXXXXXXXXXXXXXX 504
                             KN  QQQ R   NH+QISF TN K                   
Sbjct: 1262 SSQVQTPPLSSSNTSSIKNLPQQQGRPQPNHSQISFSTNTKSTTQSQGQQPANSNQSPSP 1321

Query: 505  VAVGSPTHSSLSKGASSSPRTNT 573
              +GSPT+SS+SKGA  SPRT T
Sbjct: 1322 GMIGSPTNSSISKGAGGSPRTAT 1344


Top