BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011967
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containi...   190   2e-46
emb|CBI39592.3| unnamed protein product [Vitis vinifera]              190   2e-46
ref|XP_003609027.1| Pentatricopeptide repeat-containing protein ...   173   3e-41
ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containi...   159   4e-37
ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containi...   140   2e-31

>ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  190 bits (482), Expect = 2e-46
 Identities = 103/209 (49%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
 Frame = -3

Query: 627 MNSLRHFRLHTPISHTKHSNLTLFLHTQTTPSQHSNPT-TTP-SQNLDIPNISHLITKQH 454
           MN LR  +       T+  +L   L+   TP    N T TTP S   D P IS LI KQH
Sbjct: 1   MNCLRLTQFPKRCLSTRFPSLDPKLNNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAKQH 60

Query: 453 WSEIKSLLKPTSPKTFLQLLFIHGTDPEVIYTFFKWSQVHYKVSHCLEHYCRLFHLLTNA 274
           WS++K+++K T+P + LQ LF     P++I  +FKW+Q  +   H +E +CRL HLL NA
Sbjct: 61  WSKLKTIVKETNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANA 120

Query: 273 KKYRKIRSLLYLFVKMERYSCSSVFHTLLNFGDRVSDSSVIVDMLVLAYVNNCDMGLALE 94
           K Y KIR+LL  F K   YS S++FH+L   G     +S+IVDMLV AYV N +M LALE
Sbjct: 121 KNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALE 180

Query: 93  GFERAGDYGFRLSVFSCNPLLNLVVREGR 7
           GF+RAGDYGFRLS  SCNP+L  +V+EGR
Sbjct: 181 GFDRAGDYGFRLSALSCNPMLVSLVKEGR 209


>emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  190 bits (482), Expect = 2e-46
 Identities = 103/209 (49%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
 Frame = -3

Query: 627 MNSLRHFRLHTPISHTKHSNLTLFLHTQTTPSQHSNPT-TTP-SQNLDIPNISHLITKQH 454
           MN LR  +       T+  +L   L+   TP    N T TTP S   D P IS LI KQH
Sbjct: 1   MNCLRLTQFPKRCLSTRFPSLDPKLNNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAKQH 60

Query: 453 WSEIKSLLKPTSPKTFLQLLFIHGTDPEVIYTFFKWSQVHYKVSHCLEHYCRLFHLLTNA 274
           WS++K+++K T+P + LQ LF     P++I  +FKW+Q  +   H +E +CRL HLL NA
Sbjct: 61  WSKLKTIVKETNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANA 120

Query: 273 KKYRKIRSLLYLFVKMERYSCSSVFHTLLNFGDRVSDSSVIVDMLVLAYVNNCDMGLALE 94
           K Y KIR+LL  F K   YS S++FH+L   G     +S+IVDMLV AYV N +M LALE
Sbjct: 121 KNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALE 180

Query: 93  GFERAGDYGFRLSVFSCNPLLNLVVREGR 7
           GF+RAGDYGFRLS  SCNP+L  +V+EGR
Sbjct: 181 GFDRAGDYGFRLSALSCNPMLVSLVKEGR 209


>ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510082|gb|AES91224.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  173 bits (438), Expect = 3e-41
 Identities = 85/165 (51%), Positives = 116/165 (70%)
 Frame = -3

Query: 501 QNLDIPNISHLITKQHWSEIKSLLKPTSPKTFLQLLFIHGTDPEVIYTFFKWSQVHYKVS 322
           Q+L IP IS L++KQHWSE+K  L+ T P TFL  L   G D E++  FFKWSQ  Y++S
Sbjct: 16  QSLSIPTISELLSKQHWSELKPHLRVTKPATFLDQLLNAGVDSELVLRFFKWSQKEYRLS 75

Query: 321 HCLEHYCRLFHLLTNAKKYRKIRSLLYLFVKMERYSCSSVFHTLLNFGDRVSDSSVIVDM 142
           + LE   ++ H L N+K+Y K+RS L  FVK E+++ SSVFH+LL  G R   +++I+DM
Sbjct: 76  YGLEPTSKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDM 135

Query: 141 LVLAYVNNCDMGLALEGFERAGDYGFRLSVFSCNPLLNLVVREGR 7
           LVLAYV N ++  A E F RA DYGF+LS+ SCNPLL+ +V+E +
Sbjct: 136 LVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENK 180


>ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  159 bits (402), Expect = 4e-37
 Identities = 80/162 (49%), Positives = 110/162 (67%)
 Frame = -3

Query: 501 QNLDIPNISHLITKQHWSEIKSLLKPTSPKTFLQLLFIHGTDPEVIYTFFKWSQVHYKVS 322
           Q+L I  IS L++ QHWSE+K   + T P  FL  LF  G D E++  FF+WSQ  +++S
Sbjct: 16  QSLSISTISELLSNQHWSELKPHFRTTKPAIFLDQLFNAGVDSELVLRFFQWSQKEFRIS 75

Query: 321 HCLEHYCRLFHLLTNAKKYRKIRSLLYLFVKMERYSCSSVFHTLLNFGDRVSDSSVIVDM 142
           + LE   ++ HLL N+KKY K+RS L   VK E+++ SSVFH+LL  GDR   +++I DM
Sbjct: 76  YGLETTGKVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDM 135

Query: 141 LVLAYVNNCDMGLALEGFERAGDYGFRLSVFSCNPLLNLVVR 16
           LVLAYV N ++  A E F R  DYGF+LS+ SCNPLL+ +V+
Sbjct: 136 LVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVK 177


>ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
           gi|449524964|ref|XP_004169491.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  140 bits (353), Expect = 2e-31
 Identities = 84/177 (47%), Positives = 109/177 (61%), Gaps = 4/177 (2%)
 Frame = -3

Query: 522 NPTTTP--SQNLDIPNISHLITKQHWSEIKSLLKPTSPKTFLQLLFIHG-TDPEVIYTFF 352
           NPT T   S + D   IS LI++Q WS +KS +K  SP  FL  L   G  DP ++  +F
Sbjct: 35  NPTCTAPISNDFDPLIISDLISRQQWSILKSHVKFKSPIDFLHQLMGSGDVDPLLVLRYF 94

Query: 351 KWSQVHYKVSHCLEHYCRLFHLLTNAKKYRKIRSLLYLFVKME-RYSCSSVFHTLLNFGD 175
            WS+    V++ +E  CRL +LL NAK Y KIRS+L  FVK E   S S +FH+L     
Sbjct: 95  NWSRRELNVNYSIELICRLLNLLANAKHYPKIRSILDSFVKGETNCSISLIFHSLSVCSG 154

Query: 174 RVSDSSVIVDMLVLAYVNNCDMGLALEGFERAGDYGFRLSVFSCNPLLNLVVREGRF 4
           +   +S+I DMLVLAYV N    L LE F+RAGDY ++LSV SCNPLL+ +V+E  F
Sbjct: 155 QFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEF 211