BLASTX nr result

ID: Cnidium21_contig00011953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011953
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320489.1| argonaute protein group [Populus trichocarpa...   176   1e-42
ref|XP_002271447.2| PREDICTED: protein argonaute 16-like [Vitis ...   171   8e-41
ref|XP_002534129.1| eukaryotic translation initiation factor 2c,...   162   2e-38
gb|AFV15385.1| AGO6 [Solanum lycopersicum]                            161   5e-38
ref|XP_003541581.1| PREDICTED: protein argonaute 16-like [Glycin...   161   6e-38

>ref|XP_002320489.1| argonaute protein group [Populus trichocarpa]
           gi|222861262|gb|EEE98804.1| argonaute protein group
           [Populus trichocarpa]
          Length = 869

 Score =  176 bits (447), Expect = 1e-42
 Identities = 90/130 (69%), Positives = 102/130 (78%), Gaps = 2/130 (1%)
 Frame = +2

Query: 143 MISRPGFGSSGRQIQLEANHFKVSVNSPDETFYQYSVSLSYEDKKPVENKGMGRKIIDKL 322
           MISR G G+SGR I L  NHFKVSVN PD  FYQY+VS++ ED + VE+KG+GRK+ID+L
Sbjct: 1   MISRRGVGTSGRHISLLTNHFKVSVNVPDAVFYQYNVSITSEDNRAVESKGIGRKLIDRL 60

Query: 323 YQTYSSELGGKRFAYDGEKALYTVGPLPRNKQEFTVVLEESMAKR--GSPSREGSPDEPV 496
           YQTYSSE  GKRFAYDGEK+LYTVGPLP+NK EFTVVLEES AK   GSP    SP   V
Sbjct: 61  YQTYSSEFAGKRFAYDGEKSLYTVGPLPQNKSEFTVVLEESFAKHESGSPGGGESPPAAV 120

Query: 497 KRSRRSLHSK 526
           KRS+RS  SK
Sbjct: 121 KRSKRSYRSK 130


>ref|XP_002271447.2| PREDICTED: protein argonaute 16-like [Vitis vinifera]
          Length = 960

 Score =  171 bits (432), Expect = 8e-41
 Identities = 91/167 (54%), Positives = 114/167 (68%), Gaps = 2/167 (1%)
 Frame = +2

Query: 32  MEKTGIQDLGGSXXXXXXXXXXXXXXXXQLIDPVKRVMISRPGFGSSGRQIQLEANHFKV 211
           MEKTGI++  G+                Q + P KR +ISR G G++GR+I L  NHFKV
Sbjct: 57  MEKTGIEEASGTPPLPPSPSIPPNVKPEQ-VGPPKRSVISRRGVGTAGRRISLLTNHFKV 115

Query: 212 SVNSPDETFYQYSVSLSYEDKKPVENKGMGRKIIDKLYQTYSSELGGKRFAYDGEKALYT 391
           S+N  D  FYQYSVS++ EDK+ V+ KG+GRK+ID+LY TYSSEL GK+FAYDGEK+LYT
Sbjct: 116 SMNISDAMFYQYSVSITSEDKRVVDGKGIGRKVIDRLYLTYSSELAGKKFAYDGEKSLYT 175

Query: 392 VGPLPRNKQEFTVVLEESMAK--RGSPSREGSPDEPVKRSRRSLHSK 526
           VGPLP+N  EFTVV+EE +A+   GSP   GSP    KR + S  SK
Sbjct: 176 VGPLPQNNFEFTVVVEELLARSANGSPGANGSPSGNGKRPKCSFRSK 222


>ref|XP_002534129.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223525814|gb|EEF28257.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 863

 Score =  162 bits (411), Expect = 2e-38
 Identities = 86/147 (58%), Positives = 103/147 (70%), Gaps = 13/147 (8%)
 Frame = +2

Query: 125 DPVKRVMISRPGFGSSGRQIQLEANHFKVSVNSPDETFYQYSVSLSYEDKKPVENKGMGR 304
           D  K  ++SR GFG+SG +I L +NHFKVS+N PD  FYQYSVS + ED + VE KG+GR
Sbjct: 23  DAPKHSIVSRQGFGNSGHRIPLLSNHFKVSINIPDAVFYQYSVSFTSEDDRVVEVKGIGR 82

Query: 305 KIIDKLYQTYSSELGGK-----------RFAYDGEKALYTVGPLPRNKQEFTVVLEESMA 451
           K+I++LYQTY ++LG             +FAYDGEK LYTVGPLP+NK EFTVVLEES A
Sbjct: 83  KLIERLYQTYYTDLGDTKFAYDGEKTLYKFAYDGEKTLYTVGPLPQNKLEFTVVLEESFA 142

Query: 452 K--RGSPSREGSPDEPVKRSRRSLHSK 526
           K   GSP   GSP    KRS+RS HSK
Sbjct: 143 KHGNGSPESGGSPTATSKRSKRSFHSK 169


>gb|AFV15385.1| AGO6 [Solanum lycopersicum]
          Length = 903

 Score =  161 bits (408), Expect = 5e-38
 Identities = 80/137 (58%), Positives = 104/137 (75%), Gaps = 2/137 (1%)
 Frame = +2

Query: 122 IDPVKRVMISRPGFGSSGRQIQLEANHFKVSVNSPDETFYQYSVSLSYEDKKPVENKGMG 301
           +D  KR ++ R G G+SGR+I L ANH KVS+  PDE FY YSVS++ ++K+ V +K + 
Sbjct: 30  VDQPKRTIMMRAGDGTSGREISLLANHLKVSIKCPDEIFYHYSVSITSDEKRAVNSKVIR 89

Query: 302 RKIIDKLYQTYSSELGGKRFAYDGEKALYTVGPLPRNKQEFTVVLEESMAKRG--SPSRE 475
           RKI+DKL++TYSSE  GK+FAYDGEK LYTVGPLPRN+ EFTVV+EES A++   SPS  
Sbjct: 90  RKIVDKLHETYSSEFAGKKFAYDGEKNLYTVGPLPRNRLEFTVVVEESSARQASESPSDN 149

Query: 476 GSPDEPVKRSRRSLHSK 526
           GS +  +KR + SLHSK
Sbjct: 150 GSLNHSIKRFKHSLHSK 166


>ref|XP_003541581.1| PREDICTED: protein argonaute 16-like [Glycine max]
          Length = 902

 Score =  161 bits (407), Expect = 6e-38
 Identities = 81/135 (60%), Positives = 100/135 (74%), Gaps = 2/135 (1%)
 Frame = +2

Query: 128 PVKRVMISRPGFGSSGRQIQLEANHFKVSVNSPDETFYQYSVSLSYEDKKPVENKGMGRK 307
           P K  +ISR G G++G+ I L  N F+V+VN PD  F+QYSV++++EDK+ VE+KG+GRK
Sbjct: 35  PTKYSIISRNGVGTTGKHIPLLVNLFEVAVNVPDTVFFQYSVAITFEDKQAVESKGIGRK 94

Query: 308 IIDKLYQTYSSELGGKRFAYDGEKALYTVGPLPRNKQEFTVVLEESMAKRG--SPSREGS 481
           +ID+LYQTYSSELGGKRF YDG K LYTVGPLP NK EF V+LE+S  KR   SP   GS
Sbjct: 95  VIDRLYQTYSSELGGKRFVYDGGKTLYTVGPLPLNKYEFKVLLEKSFTKRSAKSPGANGS 154

Query: 482 PDEPVKRSRRSLHSK 526
             E  KRS+ S  SK
Sbjct: 155 LHEETKRSKHSFQSK 169


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