BLASTX nr result
ID: Cnidium21_contig00011941
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00011941 (1260 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262... 194 3e-47 ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [M... 169 2e-39 ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216... 166 1e-38 ref|XP_002516840.1| serine/arginine rich splicing factor, putati... 160 5e-37 ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [M... 156 9e-36 >ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera] gi|298205010|emb|CBI34317.3| unnamed protein product [Vitis vinifera] Length = 287 Score = 194 bits (494), Expect = 3e-47 Identities = 122/275 (44%), Positives = 137/275 (49%), Gaps = 14/275 (5%) Frame = -1 Query: 1203 MGRYRERSRSYSPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLLVRNISLTAR 1024 M RYR RSRSYSP+ GLLVRNI+L AR Sbjct: 1 MARYRSRSRSYSPRRSRTPPRRRRFDDRSRPSRSYRDRRSPAPS----GLLVRNIALDAR 56 Query: 1023 PEDLRIPFERFGPVKDVYLPKNYYTGEARGFGFVKFRNSEDAAEAKHHLNDTVIGGRQIA 844 PEDLR+PFERFGPVKDVYLPKNYYTGE RGFGFVKFRN+EDAAEAKHHLN +VIGGR+IA Sbjct: 57 PEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAAEAKHHLNHSVIGGREIA 116 Query: 843 IVFAAENRKTPQDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPARNGS--RDK 670 IVFA ENRKTPQ+M P R+ S RD+ Sbjct: 117 IVFAEENRKTPQEMRTNSRVSGRHGGSYRRRSPPRSPRRRYRSYSRSPSPVRHDSRDRDR 176 Query: 669 RARDHYXXXXXXXXXXXXXXRDDKEYRSRRQSISPNRNGKSPNDKEHRGSDQ-------- 514 RD+Y RDDK YRS S SP +N +SP RGSD+ Sbjct: 177 GGRDYYSPSRSRSVSRSVSPRDDKHYRSNHNSKSPRQNDQSPRSNRDRGSDKRSFSPMKN 236 Query: 513 ----RPARLRDNDVSPHGDDYSPDKKRDPEFVRKE 421 R R+ND HG +R P R E Sbjct: 237 GQSPRSPSPRENDRRKHGKKNQGSDRRSPSPRRYE 271 >ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula] gi|355510620|gb|AES91762.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula] Length = 314 Score = 169 bits (427), Expect = 2e-39 Identities = 113/264 (42%), Positives = 128/264 (48%), Gaps = 10/264 (3%) Frame = -1 Query: 1203 MGRYRERSRSYSPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLLVRNISLTAR 1024 MGRYR RSRSYSP+ SGLLVRN+ L AR Sbjct: 1 MGRYRSRSRSYSPRRRSRTPPPRGRKRYEDDRYPDNRSRRDRRSPLPSGLLVRNLPLDAR 60 Query: 1023 PEDLRIPFERFGPVKDVYLPKNYYTGEARGFGFVKFRNSEDAAEAKHHLNDTVIGGRQIA 844 PEDLR PFER+GPVKDVYLP+NYYTGE RGFGFVK+R+ EDAAEAK LN T+IGGR+I Sbjct: 61 PEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAKQQLNHTIIGGREIR 120 Query: 843 IVFAAENRKTPQDM---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPARNGSRD 673 IVFA ENRKTPQ+M PAR+ SRD Sbjct: 121 IVFAEENRKTPQEMRVTTSHGSGRSGGGGSRRRARSRSPRRSRYRSYSKSPSPARDDSRD 180 Query: 672 KRARDHYXXXXXXXXXXXXXXRDDKEYRS-----RRQSISPNRNGKSPNDKEHRGSDQRP 508 R RD Y D K+ RS R S G+SP K+ D R Sbjct: 181 GRGRDDYSPKRSRSYSRSVSPGDGKDDRSPRAKDDRSSPRAKDGGRSPRAKD----DGRS 236 Query: 507 ARLRDNDVSPHGDD--YSPDKKRD 442 R +D+ SPH D SP K D Sbjct: 237 PRAKDDGRSPHAKDNGRSPRTKDD 260 >ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus] gi|449495419|ref|XP_004159835.1| PREDICTED: uncharacterized LOC101216537 [Cucumis sativus] Length = 248 Score = 166 bits (420), Expect = 1e-38 Identities = 111/259 (42%), Positives = 126/259 (48%), Gaps = 2/259 (0%) Frame = -1 Query: 1203 MGRYRERSRSYSPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--GLLVRNISLT 1030 M RYR RSRSYSP+ + GLLVRN+ L Sbjct: 1 MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLD 60 Query: 1029 ARPEDLRIPFERFGPVKDVYLPKNYYTGEARGFGFVKFRNSEDAAEAKHHLNDTVIGGRQ 850 ARPEDLRIPFERFGPVKDVYLPKNYYTGE RGFGFVKFR +EDAAEAK LN TVIGGR+ Sbjct: 61 ARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGRE 120 Query: 849 IAIVFAAENRKTPQDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPARNGSRDK 670 I IVFA ENRKTPQ+M PAR+ SR + Sbjct: 121 IRIVFAEENRKTPQEM---RVTSRSSGRSYRRRSPARSPRRRNRSYSRSPSPARHDSRSR 177 Query: 669 RARDHYXXXXXXXXXXXXXXRDDKEYRSRRQSISPNRNGKSPNDKEHRGSDQRPARLRDN 490 ARD Y D+ SR S +P NG+SP + ++ S R Sbjct: 178 GARDEYLSPARSRSISHSRSPRDRRDYSR--SPTPKDNGRSPREVDNARSRSR------- 228 Query: 489 DVSPHGDDYSPDKKRDPEF 433 SP GD SP R + Sbjct: 229 --SPKGDSRSPSGSRSRSY 245 >ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis] gi|223543928|gb|EEF45454.1| serine/arginine rich splicing factor, putative [Ricinus communis] Length = 257 Score = 160 bits (406), Expect = 5e-37 Identities = 102/249 (40%), Positives = 125/249 (50%), Gaps = 4/249 (1%) Frame = -1 Query: 1203 MGRYRERSRSYSPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS----GLLVRNIS 1036 M RYR RSRSYSP+ S GLLVRN+ Sbjct: 1 MARYRSRSRSYSPRRRSRTPPRGRKHHYDDEDPRDRRRVTRSHRDRRSPAPSGLLVRNLP 60 Query: 1035 LTARPEDLRIPFERFGPVKDVYLPKNYYTGEARGFGFVKFRNSEDAAEAKHHLNDTVIGG 856 L ARPEDLR PFE++GPVKDVYLPKNYYTGE RGFGFVK+R +EDAAEAK +N +IGG Sbjct: 61 LDARPEDLRGPFEKYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQRMNHKIIGG 120 Query: 855 RQIAIVFAAENRKTPQDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPARNGSR 676 R+I IV+A ENRKTPQ+M AR+ SR Sbjct: 121 REIRIVYAEENRKTPQEMRTTARVSGRHGGSTRGRTPPKSPRRRHRSYSHSPSSARHDSR 180 Query: 675 DKRARDHYXXXXXXXXXXXXXXRDDKEYRSRRQSISPNRNGKSPNDKEHRGSDQRPARLR 496 D+ A+D +Y S R+S S +R+ +SP D+ S+QR R Sbjct: 181 DRGAKD--------------------DYHSPRRSRSISRS-RSPQDERDYRSNQRSPSPR 219 Query: 495 DNDVSPHGD 469 +ND SPH + Sbjct: 220 ENDQSPHAE 228 >ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula] gi|355510621|gb|AES91763.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula] Length = 192 Score = 156 bits (395), Expect = 9e-36 Identities = 81/134 (60%), Positives = 90/134 (67%) Frame = -1 Query: 1203 MGRYRERSRSYSPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLLVRNISLTAR 1024 MGRYR RSRSYSP+ SGLLVRN+ L AR Sbjct: 1 MGRYRSRSRSYSPRRRSRTPPPRGRKRYEDDRYPDNRSRRDRRSPLPSGLLVRNLPLDAR 60 Query: 1023 PEDLRIPFERFGPVKDVYLPKNYYTGEARGFGFVKFRNSEDAAEAKHHLNDTVIGGRQIA 844 PEDLR PFER+GPVKDVYLP+NYYTGE RGFGFVK+R+ EDAAEAK LN T+IGGR+I Sbjct: 61 PEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAKQQLNHTIIGGREIR 120 Query: 843 IVFAAENRKTPQDM 802 IVFA ENRKTPQ+M Sbjct: 121 IVFAEENRKTPQEM 134