BLASTX nr result

ID: Cnidium21_contig00011931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011931
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542442.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   172   1e-64
gb|ACU23211.1| unknown [Glycine max]                                  172   1e-64
ref|XP_002321296.1| predicted protein [Populus trichocarpa] gi|2...   160   5e-62
ref|XP_002271401.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   166   1e-61
ref|XP_002526534.1| NADH-ubiquinone oxidoreductase 39 kD subunit...   164   6e-61

>ref|XP_003542442.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 9, mitochondrial-like [Glycine max]
          Length = 396

 Score =  172 bits (435), Expect(2) = 1e-64
 Identities = 85/127 (66%), Positives = 98/127 (77%)
 Frame = -3

Query: 382 KNYGTRNYSLEEVNQHMAERLAIISKEHGGIMRFIQISCLGASSSSPSRILKXXXXXXXA 203
           ++Y TRNYS EEV+ HMAE+LA ISKEHGGI+RFIQ+SCLGAS SSPSR+L+        
Sbjct: 141 RDYETRNYSFEEVHYHMAEQLAKISKEHGGILRFIQVSCLGASPSSPSRMLRTKSAAEEM 200

Query: 202 ILREIPDATIMKFALMIGTEDRILNPWAHMAKNYGFVPLFGDGSTKIQPXXXXXXXXXXX 23
           ILRE+P+ATI+K A+MIGTEDRILNPWAH AK YGF+PLFGDGSTKIQP           
Sbjct: 201 ILRELPEATILKPAVMIGTEDRILNPWAHFAKKYGFLPLFGDGSTKIQPVYVIDVAAALT 260

Query: 22  XALKDDG 2
             LKDDG
Sbjct: 261 SLLKDDG 267



 Score =  100 bits (249), Expect(2) = 1e-64
 Identities = 50/57 (87%), Positives = 53/57 (92%)
 Frame = -1

Query: 549 LGSQVLVPFRGSVDDPRHLKLM*DLGQIVLMKYNPRDEDSIKAVMAKANVVINLIGR 379
           +GSQVLVPFRGS D+PRHLKLM DLGQIV MKYNPRDE S+KAVMAKANVVINLIGR
Sbjct: 85  MGSQVLVPFRGSEDNPRHLKLMGDLGQIVPMKYNPRDESSVKAVMAKANVVINLIGR 141


>gb|ACU23211.1| unknown [Glycine max]
          Length = 396

 Score =  172 bits (435), Expect(2) = 1e-64
 Identities = 85/127 (66%), Positives = 98/127 (77%)
 Frame = -3

Query: 382 KNYGTRNYSLEEVNQHMAERLAIISKEHGGIMRFIQISCLGASSSSPSRILKXXXXXXXA 203
           ++Y TRNYS EEV+ HMAE+LA ISKEHGGI+RFIQ+SCLGAS SSPSR+L+        
Sbjct: 141 RDYETRNYSFEEVHYHMAEQLAKISKEHGGILRFIQVSCLGASPSSPSRMLRTKSAAEEM 200

Query: 202 ILREIPDATIMKFALMIGTEDRILNPWAHMAKNYGFVPLFGDGSTKIQPXXXXXXXXXXX 23
           ILRE+P+ATI+K A+MIGTEDRILNPWAH AK YGF+PLFGDGSTKIQP           
Sbjct: 201 ILRELPEATILKPAVMIGTEDRILNPWAHFAKKYGFLPLFGDGSTKIQPVYVIDVAAALT 260

Query: 22  XALKDDG 2
             LKDDG
Sbjct: 261 SLLKDDG 267



 Score =  100 bits (249), Expect(2) = 1e-64
 Identities = 50/57 (87%), Positives = 53/57 (92%)
 Frame = -1

Query: 549 LGSQVLVPFRGSVDDPRHLKLM*DLGQIVLMKYNPRDEDSIKAVMAKANVVINLIGR 379
           +GSQVLVPFRGS D+PRHLKLM DLGQIV MKYNPRDE S+KAVMAKANVVINLIGR
Sbjct: 85  MGSQVLVPFRGSEDNPRHLKLMGDLGQIVPMKYNPRDESSVKAVMAKANVVINLIGR 141


>ref|XP_002321296.1| predicted protein [Populus trichocarpa] gi|222862069|gb|EEE99611.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score =  160 bits (406), Expect(2) = 5e-62
 Identities = 81/127 (63%), Positives = 96/127 (75%)
 Frame = -3

Query: 382 KNYGTRNYSLEEVNQHMAERLAIISKEHGGIMRFIQISCLGASSSSPSRILKXXXXXXXA 203
           ++Y TRNYS EE+N  MA +LA+ISKEHGGIMRFIQ+SCLGAS+SSPSR+L+       A
Sbjct: 139 RDYETRNYSFEELNHAMAGQLAMISKEHGGIMRFIQVSCLGASASSPSRLLRAKAAGEEA 198

Query: 202 ILREIPDATIMKFALMIGTEDRILNPWAHMAKNYGFVPLFGDGSTKIQPXXXXXXXXXXX 23
           +LRE+P+AT+MK A+MIGTEDRILN WAH  K Y F+PL GDGSTKIQP           
Sbjct: 199 VLREMPEATVMKPAVMIGTEDRILNRWAHFTKKYSFLPLIGDGSTKIQPVYVVDIAAAII 258

Query: 22  XALKDDG 2
            ALKDDG
Sbjct: 259 AALKDDG 265



 Score =  102 bits (255), Expect(2) = 5e-62
 Identities = 52/57 (91%), Positives = 54/57 (94%)
 Frame = -1

Query: 549 LGSQVLVPFRGSVDDPRHLKLM*DLGQIVLMKYNPRDEDSIKAVMAKANVVINLIGR 379
           +GSQVLVPFRGS DDPRHLKLM DLGQIV MKYNPRDE+SIKAVMAKANVVINLIGR
Sbjct: 83  MGSQVLVPFRGSDDDPRHLKLMGDLGQIVPMKYNPRDENSIKAVMAKANVVINLIGR 139


>ref|XP_002271401.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 9, mitochondrial [Vitis vinifera]
           gi|297744229|emb|CBI37199.3| unnamed protein product
           [Vitis vinifera]
          Length = 399

 Score =  166 bits (419), Expect(2) = 1e-61
 Identities = 84/127 (66%), Positives = 96/127 (75%)
 Frame = -3

Query: 382 KNYGTRNYSLEEVNQHMAERLAIISKEHGGIMRFIQISCLGASSSSPSRILKXXXXXXXA 203
           + Y TRNYS EEVN HMAE+LA+ISKEHGGIMRFIQ+SCLGAS SSPSR+L        A
Sbjct: 144 REYETRNYSFEEVNHHMAEQLAMISKEHGGIMRFIQVSCLGASPSSPSRMLMAKAAAEEA 203

Query: 202 ILREIPDATIMKFALMIGTEDRILNPWAHMAKNYGFVPLFGDGSTKIQPXXXXXXXXXXX 23
           +LRE+P+ATIM+ A+MIGTEDRILN WA  AK YGF+PL+GDGSTK QP           
Sbjct: 204 VLRELPEATIMRPAVMIGTEDRILNRWAQFAKKYGFLPLYGDGSTKFQPVYVIDVAAAIM 263

Query: 22  XALKDDG 2
            ALKDDG
Sbjct: 264 AALKDDG 270



 Score = 96.7 bits (239), Expect(2) = 1e-61
 Identities = 49/57 (85%), Positives = 52/57 (91%)
 Frame = -1

Query: 549 LGSQVLVPFRGSVDDPRHLKLM*DLGQIVLMKYNPRDEDSIKAVMAKANVVINLIGR 379
           +GSQVLVPFRGS D  RHLKLM DLGQIV MKYNPRDE+SIKAVMAKANVV+NLIGR
Sbjct: 88  MGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPRDENSIKAVMAKANVVLNLIGR 144


>ref|XP_002526534.1| NADH-ubiquinone oxidoreductase 39 kD subunit, putative [Ricinus
           communis] gi|223534095|gb|EEF35812.1| NADH-ubiquinone
           oxidoreductase 39 kD subunit, putative [Ricinus
           communis]
          Length = 394

 Score =  164 bits (414), Expect(2) = 6e-61
 Identities = 82/127 (64%), Positives = 96/127 (75%)
 Frame = -3

Query: 382 KNYGTRNYSLEEVNQHMAERLAIISKEHGGIMRFIQISCLGASSSSPSRILKXXXXXXXA 203
           + Y TRNYS EEVN  MAE+LA+I+KEHGGIMR+IQ+SCLG+SSSSPSR+L+       A
Sbjct: 145 REYETRNYSFEEVNHGMAEQLAMIAKEHGGIMRYIQVSCLGSSSSSPSRMLRAKAAAEEA 204

Query: 202 ILREIPDATIMKFALMIGTEDRILNPWAHMAKNYGFVPLFGDGSTKIQPXXXXXXXXXXX 23
           +LREIP+AT+MK A MIGTEDRILN WAH  K Y F+PLFGDGSTK+QP           
Sbjct: 205 VLREIPEATVMKPAAMIGTEDRILNKWAHFVKKYSFLPLFGDGSTKLQPVYVVDVAAAII 264

Query: 22  XALKDDG 2
            ALKDDG
Sbjct: 265 AALKDDG 271



 Score = 96.3 bits (238), Expect(2) = 6e-61
 Identities = 50/57 (87%), Positives = 51/57 (89%)
 Frame = -1

Query: 549 LGSQVLVPFRGSVDDPRHLKLM*DLGQIVLMKYNPRDEDSIKAVMAKANVVINLIGR 379
           +GSQVLVPFRGS D  RHLKLM DLGQIV MKYNPRDE SIKAVMAKANVVINLIGR
Sbjct: 89  MGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPRDEASIKAVMAKANVVINLIGR 145


Top