BLASTX nr result

ID: Cnidium21_contig00011925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011925
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276816.1| PREDICTED: probable membrane-associated 30 k...   283   3e-74
ref|XP_002322913.1| predicted protein [Populus trichocarpa] gi|2...   271   6e-71
ref|NP_564846.1| plastid transcriptionally active 4 [Arabidopsis...   268   9e-70
gb|AFK43394.1| unknown [Lotus japonicus]                              265   4e-69
ref|NP_001242581.1| uncharacterized protein LOC100781742 [Glycin...   264   1e-68

>ref|XP_002276816.1| PREDICTED: probable membrane-associated 30 kDa protein,
           chloroplastic [Vitis vinifera]
           gi|297735245|emb|CBI17607.3| unnamed protein product
           [Vitis vinifera]
          Length = 324

 Score =  283 bits (723), Expect = 3e-74
 Identities = 148/209 (70%), Positives = 176/209 (84%)
 Frame = -3

Query: 629 PNASYNRFFIVKAQPPSNTAFLGTSVGAQKFAGIRLVKSNRWQSSGFSANALGTRMNLFE 450
           P AS  R  ++K+      AF G  VGA K  GIR+ +S+ ++ +G    ALGT+MNLF+
Sbjct: 17  PCASNVRSLVLKS------AFFGHGVGALKVRGIRIARSSTYRCNGHGGGALGTQMNLFD 70

Query: 449 RFARVIKSYANSIISTFEDPEKILEQAVTEMNDDLIKMRQATAQTLASQKQLENKYRTAQ 270
           RFARV+KSYAN+++S+FEDPEKILEQ V EMNDDL KMRQATAQ LASQKQLEN+Y+ AQ
Sbjct: 71  RFARVVKSYANAVLSSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKQLENRYKAAQ 130

Query: 269 LASDDWYKRAQLALEKGNEDLAREALKRRKTLADNATAMKAQLDQQKGVVDNLVSNTRLL 90
            AS+DWYKRAQLAL KG+EDLAREALKRRK+ ADNA+A+KAQLDQQK VV+NLVSNTRLL
Sbjct: 131 QASEDWYKRAQLALGKGDEDLAREALKRRKSYADNASALKAQLDQQKTVVENLVSNTRLL 190

Query: 89  ESKIQEAKSKKDTLKARAQSAKTATKLND 3
           ESKIQEAKSKKDTLKARAQSAKTA+K+++
Sbjct: 191 ESKIQEAKSKKDTLKARAQSAKTASKVSE 219


>ref|XP_002322913.1| predicted protein [Populus trichocarpa] gi|222867543|gb|EEF04674.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score =  271 bits (694), Expect = 6e-71
 Identities = 148/219 (67%), Positives = 168/219 (76%), Gaps = 1/219 (0%)
 Frame = -3

Query: 656 HMPSTSLHKPNASYNRFFIVKAQPPS-NTAFLGTSVGAQKFAGIRLVKSNRWQSSGFSAN 480
           H P TS    N   N   +   +  +  T+F    V A K A IR   S R Q       
Sbjct: 17  HPPYTSSSSNNNGNNNTTLCMVKRRTLTTSFFNGGVEALKVARIRTSLSTRSQCYRQGGG 76

Query: 479 ALGTRMNLFERFARVIKSYANSIISTFEDPEKILEQAVTEMNDDLIKMRQATAQTLASQK 300
           ALGT MNLF+RF RV+KSYAN+IIS+FEDPEKILEQ V EMNDDL KMRQATAQ LASQK
Sbjct: 77  ALGTCMNLFDRFGRVVKSYANAIISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQK 136

Query: 299 QLENKYRTAQLASDDWYKRAQLALEKGNEDLAREALKRRKTLADNATAMKAQLDQQKGVV 120
           +LENKY+ AQLAS++WY++AQLAL+KG EDLAREALKRRKT ADNA + KAQLDQQKGVV
Sbjct: 137 RLENKYKAAQLASEEWYRKAQLALQKGEEDLAREALKRRKTYADNANSFKAQLDQQKGVV 196

Query: 119 DNLVSNTRLLESKIQEAKSKKDTLKARAQSAKTATKLND 3
           +NLVSNTRLLESK+QEAKSKKDTLKARAQSAKT TK+N+
Sbjct: 197 ENLVSNTRLLESKMQEAKSKKDTLKARAQSAKTTTKMNE 235


>ref|NP_564846.1| plastid transcriptionally active 4 [Arabidopsis thaliana]
           gi|44888073|sp|O80796.1|VIPP1_ARATH RecName:
           Full=Membrane-associated protein VIPP1, chloroplastic;
           AltName: Full=Protein VESICLE-INDUCING PROTEIN IN
           PLASTIDS 1; Flags: Precursor gi|3335333|gb|AAC27135.1|
           Similar to chloroplast membrane-associated 30KD protein
           precursor (IM30) gb|M73744 from Pisum sativum. ESTs
           gb|N37557, gb|W43887 and gb|AA042479 come from this gene
           [Arabidopsis thaliana] gi|15027977|gb|AAK76519.1|
           unknown protein [Arabidopsis thaliana]
           gi|21436055|gb|AAM51228.1| unknown protein [Arabidopsis
           thaliana] gi|332196228|gb|AEE34349.1| plastid
           transcriptionally active 4 [Arabidopsis thaliana]
          Length = 330

 Score =  268 bits (684), Expect = 9e-70
 Identities = 147/223 (65%), Positives = 173/223 (77%), Gaps = 2/223 (0%)
 Frame = -3

Query: 665 TGIHMP--STSLHKPNASYNRFFIVKAQPPSNTAFLGTSVGAQKFAGIRLVKSNRWQSSG 492
           TG+  P   T+   P+ S NR   ++  P   T+F G S GA +   +RL   NR + +G
Sbjct: 9   TGLFPPLRPTASSSPSTSSNRPCSLRILP-LRTSFFGNSSGALRVNVLRLACDNRLRCNG 67

Query: 491 FSANALGTRMNLFERFARVIKSYANSIISTFEDPEKILEQAVTEMNDDLIKMRQATAQTL 312
                 G  MNLFERF+RV+KSYAN++IS+FEDPEKILEQ V EMN DL KMRQATAQ L
Sbjct: 68  H-----GATMNLFERFSRVVKSYANALISSFEDPEKILEQTVIEMNSDLTKMRQATAQVL 122

Query: 311 ASQKQLENKYRTAQLASDDWYKRAQLALEKGNEDLAREALKRRKTLADNATAMKAQLDQQ 132
           ASQKQL+NKY+ AQ +SDDWYKRAQLAL KG+EDLAREALKRRK+ ADNATA+K QLDQQ
Sbjct: 123 ASQKQLQNKYKAAQQSSDDWYKRAQLALAKGDEDLAREALKRRKSFADNATALKTQLDQQ 182

Query: 131 KGVVDNLVSNTRLLESKIQEAKSKKDTLKARAQSAKTATKLND 3
           KGVVDNLVSNTRLLESKIQEAK+KKDTL ARA++AKTATK+ +
Sbjct: 183 KGVVDNLVSNTRLLESKIQEAKAKKDTLLARARTAKTATKVQE 225


>gb|AFK43394.1| unknown [Lotus japonicus]
          Length = 326

 Score =  265 bits (678), Expect = 4e-69
 Identities = 143/218 (65%), Positives = 175/218 (80%), Gaps = 1/218 (0%)
 Frame = -3

Query: 653 MPSTSLHKPNASYNRFFIVKAQPPSNTAFLGT-SVGAQKFAGIRLVKSNRWQSSGFSANA 477
           +PST     + S +    +  + P  T+FLGT +V   + +G+R+VK  R    G     
Sbjct: 11  LPSTPFQSSSPSPSSTLCM-LKKPLTTSFLGTGTVEVLRLSGMRVVKPVRAPRRG----- 64

Query: 476 LGTRMNLFERFARVIKSYANSIISTFEDPEKILEQAVTEMNDDLIKMRQATAQTLASQKQ 297
            G RMNLF+RFARV+KSYAN++IS+FEDPEKILEQAV EMNDDL KMRQATAQ LASQK+
Sbjct: 65  -GARMNLFDRFARVVKSYANAVISSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKR 123

Query: 296 LENKYRTAQLASDDWYKRAQLALEKGNEDLAREALKRRKTLADNATAMKAQLDQQKGVVD 117
           +ENKY+ AQ AS++WY++AQLAL+KG EDLAREALKRRK+ ADNA++ KAQLDQQKGVV+
Sbjct: 124 MENKYKAAQQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASSSKAQLDQQKGVVE 183

Query: 116 NLVSNTRLLESKIQEAKSKKDTLKARAQSAKTATKLND 3
           NLVSNTRLLESKI EA+SKKDTLKARAQSAKTATK+++
Sbjct: 184 NLVSNTRLLESKISEARSKKDTLKARAQSAKTATKVSE 221


>ref|NP_001242581.1| uncharacterized protein LOC100781742 [Glycine max]
           gi|255641682|gb|ACU21113.1| unknown [Glycine max]
          Length = 323

 Score =  264 bits (675), Expect = 1e-68
 Identities = 139/195 (71%), Positives = 165/195 (84%), Gaps = 1/195 (0%)
 Frame = -3

Query: 584 PSNTAFLGTS-VGAQKFAGIRLVKSNRWQSSGFSANALGTRMNLFERFARVIKSYANSII 408
           P  T+F GT+ V   K   +R+VK  R         ALG RMNLF+RFARV+KSYAN+++
Sbjct: 30  PLTTSFFGTARVEVLKLRVMRIVKPTR------GGGALGARMNLFDRFARVVKSYANAVL 83

Query: 407 STFEDPEKILEQAVTEMNDDLIKMRQATAQTLASQKQLENKYRTAQLASDDWYKRAQLAL 228
           S+FEDPEKILEQAV EMNDDL KMRQATAQ LASQK+LENKY+ AQ AS++WY++AQLAL
Sbjct: 84  SSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAQQASEEWYRKAQLAL 143

Query: 227 EKGNEDLAREALKRRKTLADNATAMKAQLDQQKGVVDNLVSNTRLLESKIQEAKSKKDTL 48
           +KG EDLAREALKRRK+ ADNA+++KAQLDQQK VV+NLVSNTRLLESKIQEA+SKKDTL
Sbjct: 144 QKGEEDLAREALKRRKSYADNASSLKAQLDQQKTVVENLVSNTRLLESKIQEARSKKDTL 203

Query: 47  KARAQSAKTATKLND 3
           KARAQSAKTATK+++
Sbjct: 204 KARAQSAKTATKVSE 218


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