BLASTX nr result

ID: Cnidium21_contig00011922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011922
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_175910.2| Ribonuclease III-like protein [Arabidopsis thal...   101   5e-20
ref|NP_001077721.1| Ribonuclease III-like protein [Arabidopsis t...   101   5e-20
ref|XP_002279256.1| PREDICTED: uncharacterized protein LOC100242...   100   9e-20
ref|NP_001236496.1| uncharacterized protein LOC100527214 [Glycin...    99   3e-19
ref|XP_003636379.1| hypothetical protein MTR_040s0004 [Medicago ...    97   2e-18

>ref|NP_175910.2| Ribonuclease III-like protein [Arabidopsis thaliana]
           gi|34146874|gb|AAQ62445.1| At1g55140 [Arabidopsis
           thaliana] gi|51968468|dbj|BAD42926.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332195069|gb|AEE33190.1| Ribonuclease III-like
           protein [Arabidopsis thaliana]
          Length = 237

 Score =  101 bits (252), Expect = 5e-20
 Identities = 44/66 (66%), Positives = 55/66 (83%)
 Frame = +1

Query: 163 PISPNQGKVREATCMGYETWLPAPPKVDNPRSIYNAASLAFIGDCIYEIFARRHFLYPPL 342
           P S + G   + TC+GYE W P+PPKV+ PRS++NAASLA+IGD IYEI+ARRHFL+PPL
Sbjct: 66  PASKDIGDGFDDTCVGYEKWFPSPPKVEKPRSVFNAASLAYIGDSIYEIYARRHFLFPPL 125

Query: 343 NIEEYN 360
           +IEEYN
Sbjct: 126 SIEEYN 131


>ref|NP_001077721.1| Ribonuclease III-like protein [Arabidopsis thaliana]
           gi|332195070|gb|AEE33191.1| Ribonuclease III-like
           protein [Arabidopsis thaliana]
          Length = 170

 Score =  101 bits (252), Expect = 5e-20
 Identities = 44/66 (66%), Positives = 55/66 (83%)
 Frame = +1

Query: 163 PISPNQGKVREATCMGYETWLPAPPKVDNPRSIYNAASLAFIGDCIYEIFARRHFLYPPL 342
           P S + G   + TC+GYE W P+PPKV+ PRS++NAASLA+IGD IYEI+ARRHFL+PPL
Sbjct: 66  PASKDIGDGFDDTCVGYEKWFPSPPKVEKPRSVFNAASLAYIGDSIYEIYARRHFLFPPL 125

Query: 343 NIEEYN 360
           +IEEYN
Sbjct: 126 SIEEYN 131


>ref|XP_002279256.1| PREDICTED: uncharacterized protein LOC100242891 [Vitis vinifera]
           gi|297743076|emb|CBI35943.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score =  100 bits (250), Expect = 9e-20
 Identities = 55/128 (42%), Positives = 76/128 (59%), Gaps = 12/128 (9%)
 Frame = +1

Query: 13  MVSLNVCSSLDTTTHQRLPYTPHRXXXXXXXXXXXXXXXXXXXXSESN----LIPISP-- 174
           M SL+V +S DT    RLPY PH                       ++    ++P++   
Sbjct: 6   MASLSVRASWDTLP--RLPYNPHNRRKPKTPISLKPPLNPSPVTLVASPTGTVVPVAELL 63

Query: 175 -----NQGKVR-EATCMGYETWLPAPPKVDNPRSIYNAASLAFIGDCIYEIFARRHFLYP 336
                N  +V+ + + MGY+ WLP+PPKV  PRS YNAASLA++GDCI+E++ARRHFL+P
Sbjct: 64  RRDIQNSSQVKSDKSYMGYDIWLPSPPKVKKPRSAYNAASLAYLGDCIFELYARRHFLFP 123

Query: 337 PLNIEEYN 360
           PLN+EEYN
Sbjct: 124 PLNMEEYN 131


>ref|NP_001236496.1| uncharacterized protein LOC100527214 [Glycine max]
           gi|255631798|gb|ACU16266.1| unknown [Glycine max]
          Length = 240

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 41/59 (69%), Positives = 53/59 (89%)
 Frame = +1

Query: 184 KVREATCMGYETWLPAPPKVDNPRSIYNAASLAFIGDCIYEIFARRHFLYPPLNIEEYN 360
           +V++ T +GYE WLP PPKV  PRS++NAA+LA+IGDCIYE++ARRHFL+PPL+IEEYN
Sbjct: 76  EVQDETYLGYEKWLPTPPKVVKPRSVFNAATLAYIGDCIYELYARRHFLFPPLSIEEYN 134


>ref|XP_003636379.1| hypothetical protein MTR_040s0004 [Medicago truncatula]
           gi|355502314|gb|AES83517.1| hypothetical protein
           MTR_040s0004 [Medicago truncatula]
          Length = 279

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 42/68 (61%), Positives = 54/68 (79%), Gaps = 5/68 (7%)
 Frame = +1

Query: 172 PNQGKVREA-----TCMGYETWLPAPPKVDNPRSIYNAASLAFIGDCIYEIFARRHFLYP 336
           P  GK+ E      T +GY+ WLP PPKV  PRS++NAA+LA+IGDCIYE++ARRHFL+P
Sbjct: 81  PTIGKIEEVQEHDETYLGYDRWLPTPPKVVKPRSVFNAATLAYIGDCIYELYARRHFLFP 140

Query: 337 PLNIEEYN 360
           PL+IEE+N
Sbjct: 141 PLSIEEFN 148


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